prot_L-elsbetiae_contig1249.2025.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1249.2025.1
Unique Nameprot_L-elsbetiae_contig1249.2025.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length817
Homology
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: D8LMJ6_ECTSI (Suf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ6_ECTSI)

HSP 1 Score: 1010 bits (2612), Expect = 0.000e+0
Identity = 520/593 (87.69%), Postives = 550/593 (92.75%), Query Frame = 0
Query:  206 STIPTHRRLRRQVSAAGEFDYGAIGNRASDRFKAYVRRIELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFVERHE 798
            +TIPT R L+RQ SAAGEFDYG IGNRASDRFK YVRRIELD WDTDAWTGLVKEAQNNRGGGMSLKD+LRK LKQFPTSGR+ RML QAEMESGDWQAADKVLQEGLE C SLELWLLYLERVRRSAVAGGGRTEQEAR+DTI AFELALLHVGCNPASTPLWQ+YLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLE LWRECEEFEMAGNEVLWKTKFSL+YLPK+MAAKAVYKERKPIWDGIDPNLLAR PRG     XXXXXXXXXXXXXXXX +AQAGQY+LWKRRLA+ER+NPEL DEDGLR RVRHSYAQCL+H RH+CEIWYDLAEYE+SLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGR++EA+  WKAF+ DRR STT +VMYLRFVRRNMGKEAARRAFG TR LRR+  + +  RLYLAHASIELHVNGEPEVARRV EHGLSQHEG+V EPEYVLEYIDFLVQRNDE+NLRVLFERVLHPSAMPAERARLVWERFVQLELCLS TGGSL +AQ+VE RMNQVY D+SGPSGLLALWKRCSV+GCGMHPEG+VDSAFSDRMF ER E
Sbjct:   27 ATIPTRRLLKRQASAAGEFDYGVIGNRASDRFKTYVRRIELDPWDTDAWTGLVKEAQNNRGGGMSLKDVLRKFLKQFPTSGRYRRMLAQAEMESGDWQAADKVLQEGLETCASLELWLLYLERVRRSAVAGGGRTEQEAREDTIAAFELALLHVGCNPASTPLWQKYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEPLWRECEEFEMAGNEVLWKTKFSLEYLPKHMAAKAVYKERKPIWDGIDPNLLARPPRGHXX--XXXXXXXXXXXXXXXXEEAQAGQYRLWKRRLAFERTNPELTDEDGLRARVRHSYAQCLSHLRHFCEIWYDLAEYEYSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRIEEADAAWKAFLKDRR-STTGHVMYLRFVRRNMGKEAARRAFGATRALRRAGLVGY--RLYLAHASIELHVNGEPEVARRVLEHGLSQHEGYVAEPEYVLEYIDFLVQRNDEENLRVLFERVLHPSAMPAERARLVWERFVQLELCLSSTGGSLAKAQDVERRMNQVYQDNSGPSGLLALWKRCSVAGCGMHPEGEVDSAFSDRMFFERRE 614          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A0A9DS54_ARUDO (Suf domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DS54_ARUDO)

HSP 1 Score: 293 bits (749), Expect = 1.050e-86
Identity = 171/459 (37.25%), Postives = 266/459 (57.95%), Query Frame = 0
Query:  274 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLE 731
            I  K+L  FPT+ ++ +  VQA M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y+ ++KS     P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR LA+E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D AA ++++A++ IP S++L+ A A++EE RG +  A TI+++ IA+    T+ A++ ++RF+RR+ G EAAR+ F D RK       + T+ +Y+A+A+I   ++ + +VA+ VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S +PAE +  VW+RF Q E
Sbjct:   43 IYEKLLATFPTAAKYWKQYVQAYMATNNDEATKQIFSRCLLNCLHINLWCCYINFIRRVNDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYIAFLKSMPAVMPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKYIDDIDWNVLAIPPTGSY---------------------KEEQQCMAWKRLLAFEKGNPQRIDATTANRRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSLDSAAKIFQRALKAIPDSEVLKYAFAEMEESRGAIQTAKTIYESLIAENANVTSLAHIQFIRFLRRSEGIEAARKYFLDARK-----SPSCTYHVYVAYATIAFCLDKDAKVAQSVFEAGLKR---FMHEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPAEESIEVWKRFAQFE 465          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A2K1KV29_PHYPA (Suf domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KV29_PHYPA)

HSP 1 Score: 304 bits (778), Expect = 2.130e-86
Identity = 183/524 (34.92%), Postives = 284/524 (54.20%), Query Frame = 0
Query:  244 IELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLA 766
            I ++  D DAW GL  EAQ    G      I  +++  FPTS +F ++ V+A++ + D  A  ++    L  C+ ++LW  YL  +R+     G     E R++  KAFE  L H+G +  + P+W  Y+ Y+K+    +P ++  +MTA+RK Y++ V  P+  +E +W+E E FE + +  L K   + +Y PK+ +A+AVY+ERK   D I+ N+LA  P G                        +  Q   WK+ L +E+ NP+ +D  GL   V  +Y QCL +  HY +IWYD A +    G  D AA ++++A++ +P + +L  A A+ EE RG V EA  +++    + +T+   A +  +RFVRR  G EAAR+ F + RK         T+ +Y+A A++EL V+ +P+VAR +FE GL +   ++ EP YVLEY DFL + NDE N+RVLFER L  S +PAE +  VW RF+  E    +T G L     VE R  +  + +     L+A
Sbjct:  104 ILINPHDVDAWNGLCNEAQMKPIG--DAVPIYEELVSTFPTSAKFWKVYVEAQLTANDDDAVKQIFSRCLLQCLHVDLWRAYLRYMRKVNENRGS----EGREEMKKAFEFMLGHIGFDINAGPVWLEYISYLKAAPAATPQEESFRMTAVRKAYQKAVLAPVHLVEQIWKEYESFENSVSRALAKGLLA-EYQPKHFSARAVYRERKKYCDHIETNMLAVPPTGSY---------------------KEEQQCIAWKQLLKFEKGNPQRLDPVGLTKHVAFTYEQCLMYLYHYPDIWYDYATWHAQNGSPDSAAVIFQRALKALPDTAVLHYAYAEFEEARGAVKEAKAVYETLTTNSKTADALAYIQLMRFVRRTEGIEAARKIFLEARK-----SSACTYHVYVASATMELCVDKDPKVARNIFELGLKK---YIHEPAYVLEYADFLCRMNDERNVRVLFERAL--SVLPAEESAEVWNRFLAFE----QTYGDLASTLKVEQRRKEALSQAGDDGALVA 585          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A388JTY0_CHABU (Suf domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTY0_CHABU)

HSP 1 Score: 306 bits (783), Expect = 3.870e-86
Identity = 181/541 (33.46%), Postives = 298/541 (55.08%), Query Frame = 0
Query:  228 AIGNRASDRFKAYVRRIELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIA-DRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLAL 767
            ++G+  +D+     +RIE +++D +AW  L  EAQ       +L +    IL  FP+S R  +M  + ++ +G+  A   +    L NC+ ++LW  YL  +R+      GR   E R++T +AFE  L HVG + ++  +W  Y+ ++KS    +  ++  +MTAIRKVY+RV+ +P+ G++GLW++ E FE + +  L K   + +Y PK+ +A+AVY+ERK  ++ +D  +LA  P G                      D Q  Q   WK+ +A+E+SNP+ +D      RV  +Y QCL +  HY ++WY+ A ++   G+ D A  V+++A+  +P S +L  A A+ +E  G V +A +++ A I  D   +  A + ++RF+RR  G +AAR+ F   RK         T+ +Y+A A +EL ++ +P+VAR +FE GL +   ++ EP Y+LEY+DFL+Q ND+ N+R L ER L  S +P E +  VW++F++ EL      G L     VE R  +V  D    +  L L
Sbjct:  158 SVGHAPTDKELRARKRIESNKYDLEAWGWLTTEAQARPAESAALYEF---ILSCFPSSARHWKMYAETQISAGNDDAVKSIFSRSLLNCLHIDLWRCYLRYIRK---VNDGRGV-EGREETKRAFEFMLEHVGYDISACQIWMEYISFLKSIPGGTAQEESQRMTAIRKVYQRVILIPMHGIDGLWKDYESFENSVSRALAKGLLA-EYQPKHFSARAVYRERKKYFEHLDLGMLAVPPSGS-------------------LKDEQ--QCVNWKKLIAFEKSNPQRLDAAMCAKRVAFTYEQCLMYLYHYPDMWYNYATWQAEQGQHDPAVRVFQRALMALPDSAVLHYAFAEYQESNGNVRDARSVYDALIRNDAAANALAYIQFMRFIRRTEGVDAARKVFMAARKSPMC-----TYHVYVASAKMELCIDKDPKVARNIFELGLKK---YIHEPAYILEYLDFLMQLNDDRNIRALLERAL--SVLPPEESAEVWDKFLEFELLY----GDLQSVLKVEKRRREVLQDGGEGTNTLLL 655          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: G7KP74_MEDTR (Cleavage stimulation factor n=4 Tax=Trifolieae TaxID=163742 RepID=G7KP74_MEDTR)

HSP 1 Score: 295 bits (756), Expect = 4.290e-85
Identity = 181/556 (32.55%), Postives = 299/556 (53.78%), Query Frame = 0
Query:  246 LDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYND---SSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFV 794
            +D+++ ++   L  EAQ      +S+ +   I  ++L+ +PT+ +F +  V+A M   +  A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAFE  L +VG + AS P+W  Y+ ++KS     P ++ ++MT +RKVY+R +  P   +E LW++ + FE + ++ L K   S +Y PKY +A+AVY+ERK  +D ID N+LA  P G                        +  Q+  WK+ L++E+ NP+ ID      RV  +Y QCL +  HY ++WYD A +    G  D A  V++++++ +P S++LR A A+LEE RG +  A  I++  + D   +T  A++ ++RF+RR  G E AR+ F D RK       + T+ +Y+A+AS+   ++ +P++A  VFE GL     F+ EP Y+LEY DFL++ ND+ N+R LFER L  S++P E +  VW+RFV+ E    +T G L     VE R  + + +   ++  S L  +  R S          D+D+       V
Sbjct:    2 VDKYNVESAEKLANEAQ-----ALSIAEATPIYEQLLQLYPTAAKFWKQYVEAHMAVNNDDAIKQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGA----EGQEETKKAFEFMLSYVGSDIASGPVWMEYIAFLKSLPAAHPQEETHRMTVVRKVYQRAIITPTHHIEQLWKDYDSFESSVSQKLAKGLIS-EYQPKYNSARAVYRERKKFFDEIDWNMLAVPPTGSH---------------------KEEMQWMSWKKLLSFEKGNPQRIDIASSNKRVIFTYEQCLMYLYHYPDVWYDYATWHAKAGSIDAAIKVFQRSLKALPDSEMLRYAYAELEESRGAIQAAKKIYENLLGDSENATALAHIQFIRFLRRTEGVEPARKYFLDARK-----SPSCTYHVYVAYASVAFCLDKDPKMAHNVFEAGLKH---FMHEPVYILEYADFLIRLNDDQNIRALFERAL--SSLPLEDSVEVWKRFVKFE----QTYGDLASMLKVEQRRKEAFGEEATAASESSLQDVVSRYSFMDLWPCSSNDLDNLSRQEWLV 512          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A5E4FC55_PRUDU (PREDICTED: cleavage stimulation factor n=2 Tax=Amygdaloideae TaxID=171637 RepID=A0A5E4FC55_PRUDU)

HSP 1 Score: 290 bits (743), Expect = 5.630e-85
Identity = 175/529 (33.08%), Postives = 288/529 (54.44%), Query Frame = 0
Query:  242 RRIELDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADR-RTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS--GPSGL 764
            R++  D+++ +A   L  EA +     + + +   I  ++L  FPT+ ++ +  V+A+M   + +A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    S  ++  +M A+RKVY++ +  P   +E LW+E E FE + +  L K   S +Y PK+ +A+AVY+ERK   DGID N+LA  P G                        +  Q+  WK+ LA+E+ NP+ I+      R+  +Y QCL H  HY ++WYD A +    G  D A  V++++++ +P S++LR A  +LEE RG +     I+++ + D   T+  A++ ++RF+RR  G EAAR+ F D RK         T+ +Y+A+A +   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S++P+E +  VW+RF   E    +T G L     VE R  +  + +   GPS L
Sbjct:   13 RKLVDDKYNVEATESLANEALH-----LPISEAAPIYEQLLTVFPTAAKYWKQYVEAQMVVNNDEATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----VEGQEETRKAFDFMLSYVGADIASGPVWMEYITFLKSLPALSTQEESQRMIAVRKVYQKAIVTPTHHIEQLWKEYENFENSVSRQLAKGLLS-EYQPKFNSARAVYRERKKYVDGIDWNMLAVPPTGSY---------------------KEESQWMAWKKLLAFEKGNPQRIENGSSNKRIIFTYEQCLMHLYHYPDLWYDYAMWHAKSGSIDAAIKVFQRSLKALPDSEMLRYAYGELEESRGAIQPTKKIYESLLGDGVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNC-----TYHVYVAYAMMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLTRLNDDRNIRALFERAL--SSLPSEESVEVWKRFTSFE----QTYGDLASMLKVERRKKEALSGTGEEGPSSL 496          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A445FD46_GLYSO (Cleavage stimulation factor subunit 77 isoform C n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FD46_GLYSO)

HSP 1 Score: 289 bits (739), Expect = 1.680e-84
Identity = 170/492 (34.55%), Postives = 276/492 (56.10%), Query Frame = 0
Query:  274 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGL 764
            I  ++L  FPT+ +F R  V+A M + +  A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    +  ++ ++MT +RKVY++ +  P   +E LW++ E FE + +  L K   S +Y PKY +A+AVY+ERK   D ID N+LA  P G                        +  Q+  WKR L++E+ NP+ ID      R+  +Y QCL H  HY +IWYD A +    G  D A  V+++A++ +P S++LR A A+LEE RG +  A  I+++ + D  ++TT +++ ++RF+RR  G EAAR+ F D RK       + T+ +Y+A+A++   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL++ ND+ N+R LFER L  S++P E +  VW++F + E    +T G L     VE R  +  + +   + L
Sbjct:   33 IYEQLLLLFPTAAKFWRQYVEAHMAANNDDATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----MEGQEETRKAFDFMLNYVGADIASGPVWMEYIAFLKSLPAINAQEESHRMTTMRKVYQKAIVTPTHHIEQLWKDYENFENSVSRQLAKGLIS-EYQPKYNSARAVYRERKKYVDEIDWNMLAVPPTGSY---------------------KEEMQWMAWKRLLSFEKGNPQRIDTASSNKRIIFTYEQCLMHMYHYPDIWYDYATWHAKGGLIDSAIKVFQRALKALPDSEMLRYAYAELEESRGAIQAAKKIYESVMGDGDSATTLSHIQFIRFLRRTEGVEAARKYFLDARK-----SPSCTYHVYVAYATMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLIRLNDDQNIRALFERAL--SSLPPEESVEVWKKFTKFE----QTYGDLASMLKVEQRRKEALSGAEDGTAL 484          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A1B6PAU9_SORBI (Suf domain-containing protein n=16 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PAU9_SORBI)

HSP 1 Score: 293 bits (751), Expect = 4.160e-84
Identity = 173/487 (35.52%), Postives = 273/487 (56.06%), Query Frame = 0
Query:  274 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS 759
            I  K+L  FPT+ ++ +  V+A M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y++++KS    +P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR L +E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D A+ ++++A++ IP S++L+ A A++EE RG +  A TI+++ + +  + T+ AN+ ++RF+RR  G EAAR+ F D RK       + T+ LY+A+A++   V+ + +VA+ VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S +P E +  VW RF Q E       G L     VE R  +  + +S
Sbjct:   42 IYEKLLATFPTAAKYWKQYVEAYMATNNHEATKQIFSRCLLNCLHISLWRCYINFIRRINDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYINFLKSMPAVTPHEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKFIDDIDWNVLATPPTGSY---------------------KEEQQCMAWKRLLVFEKGNPQRIDATTANRRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSMDSASKIFQRALKAIPDSEVLKYAFAEMEESRGAIQTAKTIYESLLGENASVTSLANIQFIRFLRRTEGIEAARKYFLDARK-----SPSCTYHLYVAYATMAFCVDKDAKVAQSVFEAGLKR---FMHEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPPEESTEVWRRFAQFEQIY----GDLSSMLKVEQRRKEALSRTS 488          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A5E4FCZ5_PRUDU (PREDICTED: cleavage stimulation factor n=4 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FCZ5_PRUDU)

HSP 1 Score: 290 bits (743), Expect = 7.340e-84
Identity = 175/529 (33.08%), Postives = 288/529 (54.44%), Query Frame = 0
Query:  242 RRIELDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADR-RTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS--GPSGL 764
            R++  D+++ +A   L  EA +     + + +   I  ++L  FPT+ ++ +  V+A+M   + +A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    S  ++  +M A+RKVY++ +  P   +E LW+E E FE + +  L K   S +Y PK+ +A+AVY+ERK   DGID N+LA  P G                        +  Q+  WK+ LA+E+ NP+ I+      R+  +Y QCL H  HY ++WYD A +    G  D A  V++++++ +P S++LR A  +LEE RG +     I+++ + D   T+  A++ ++RF+RR  G EAAR+ F D RK         T+ +Y+A+A +   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S++P+E +  VW+RF   E    +T G L     VE R  +  + +   GPS L
Sbjct:   13 RKLVDDKYNVEATESLANEALH-----LPISEAAPIYEQLLTVFPTAAKYWKQYVEAQMVVNNDEATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----VEGQEETRKAFDFMLSYVGADIASGPVWMEYITFLKSLPALSTQEESQRMIAVRKVYQKAIVTPTHHIEQLWKEYENFENSVSRQLAKGLLS-EYQPKFNSARAVYRERKKYVDGIDWNMLAVPPTGSY---------------------KEESQWMAWKKLLAFEKGNPQRIENGSSNKRIIFTYEQCLMHLYHYPDLWYDYAMWHAKSGSIDAAIKVFQRSLKALPDSEMLRYAYGELEESRGAIQPTKKIYESLLGDGVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNC-----TYHVYVAYAMMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLTRLNDDRNIRALFERAL--SSLPSEESVEVWKRFTSFE----QTYGDLASMLKVERRKKEALSGTGEEGPSSL 496          
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A2T7DSZ3_9POAL (Suf domain-containing protein n=9 Tax=Panicoideae TaxID=147369 RepID=A0A2T7DSZ3_9POAL)

HSP 1 Score: 291 bits (746), Expect = 2.480e-83
Identity = 174/487 (35.73%), Postives = 278/487 (57.08%), Query Frame = 0
Query:  274 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS 759
            I  K+L  FPT+ ++ +  V+A M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y+ ++KS    +P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR LA+E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D AA ++++A++ IP S +L+ A A++EE RG +  A TI+++ + +  + T+ A++ ++RF+RR  G EAAR+ F D RK       + T+ +Y+A+A++   ++ + +VA+ VFE GL +   F++EP Y+LEY DFL + ND+ N+R LFER L  S +P E++  VW+RFVQ E    +T G L     VE R  +  + +S
Sbjct:   50 IYEKLLATFPTAAKYWKQYVEAYMATNNDEATKQIFSRCLLNCLHISLWRCYINFIRRINDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYITFLKSMPAVTPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKYIDDIDWNVLAVPPTGSY---------------------KEEQQSMAWKRLLAFEKGNPQRIDVTTANKRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSMDSAAKIFQRALKAIPDSAVLKYAFAEMEESRGVIQTAKTIYESLLGENASVTSLAHIQFIRFLRRTEGIEAARKYFLDARK-----SPSCTYHVYVAYATMAFCLDKDAKVAQSVFEAGLKR---FMQEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPPEKSIEVWKRFVQFE----QTYGDLSSMLKVEQRRKEALSRTS 496          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMJ6_ECTSI0.000e+087.69Suf domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A0A9DS54_ARUDO1.050e-8637.25Suf domain-containing protein n=1 Tax=Arundo donax... [more]
A0A2K1KV29_PHYPA2.130e-8634.92Suf domain-containing protein n=4 Tax=Physcomitriu... [more]
A0A388JTY0_CHABU3.870e-8633.46Suf domain-containing protein n=1 Tax=Chara brauni... [more]
G7KP74_MEDTR4.290e-8532.55Cleavage stimulation factor n=4 Tax=Trifolieae Tax... [more]
A0A5E4FC55_PRUDU5.630e-8533.08PREDICTED: cleavage stimulation factor n=2 Tax=Amy... [more]
A0A445FD46_GLYSO1.680e-8434.55Cleavage stimulation factor subunit 77 isoform C n... [more]
A0A1B6PAU9_SORBI4.160e-8435.52Suf domain-containing protein n=16 Tax=Andropogone... [more]
A0A5E4FCZ5_PRUDU7.340e-8433.08PREDICTED: cleavage stimulation factor n=4 Tax=Pru... [more]
A0A2T7DSZ3_9POAL2.480e-8335.73Suf domain-containing protein n=9 Tax=Panicoideae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availableGENE3D1.25.40.1040coord: 232..780
e-value: 1.4E-129
score: 435.2
NoneNo IPR availablePANTHERPTHR19980RNA CLEAVAGE STIMULATION FACTORcoord: 240..761
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 389..422
e-value: 16.0
score: 13.8
coord: 660..695
e-value: 4.6
score: 16.2
coord: 518..550
e-value: 26.0
score: 12.4
coord: 343..378
e-value: 270.0
score: 4.9
coord: 552..584
e-value: 5.4
score: 16.0
coord: 697..733
e-value: 170.0
score: 6.4
coord: 300..331
e-value: 1.2
score: 18.2
IPR008847Suppressor of forkedPFAMPF05843Sufcoord: 608..770
e-value: 1.3E-31
score: 110.7
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 538..571
score: 9.328
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 538..571
score: 9.175
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 242..758

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1249contigL-elsbetiae_contig1249:11295..26988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1249.2025.1mRNA_L-elsbetiae_contig1249.2025.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1249 11295..26990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1249.2025.1 ID=prot_L-elsbetiae_contig1249.2025.1|Name=mRNA_L-elsbetiae_contig1249.2025.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=817bp
LYHLWESGWDTVSQGSMPGESNSKQKDEPAKKAKKSGASTKKEKHDAKGK
GAATASKAKLTTAGAATKAKGIKKSKSSKARKTAAAKESAVVDGDDNDET
KETKTSKSKSKSKAVKVEEGKAKGGKDQQPEEPEPADGDDNDGDGDGDGD
GDERQEQELESMEEDQEAEEDAAEGDGDGEGDGEGDGDGEAESAAPVPSM
HVPTISTIPTHRRLRRQVSAAGEFDYGAIGNRASDRFKAYVRRIELDQWD
TDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESG
DWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIK
AFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRR
VVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKER
KPIWDGIDPNLLARTPRGIDGDGGGGGSGGRDGRENKKRKDAQAGQYKLW
KRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFS
LGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIA
DRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLA
HASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDED
NLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENR
MNQVYNDSSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFVERHETW
KQRDQGQQRGDKDAKDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR008847Suf
IPR013026TPR-contain_dom
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf