mRNA_L-elsbetiae_contig1249.2025.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1249.2025.1
Unique NamemRNA_L-elsbetiae_contig1249.2025.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: D8LMJ6_ECTSI (Suf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ6_ECTSI)

HSP 1 Score: 1010 bits (2612), Expect = 0.000e+0
Identity = 520/593 (87.69%), Postives = 550/593 (92.75%), Query Frame = 1 
Query:  616 STIPTHRRLRRQVSAAGEFDYGAIGNRASDRFKAYVRRIELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFVERHE 2394
            +TIPT R L+RQ SAAGEFDYG IGNRASDRFK YVRRIELD WDTDAWTGLVKEAQNNRGGGMSLKD+LRK LKQFPTSGR+ RML QAEMESGDWQAADKVLQEGLE C SLELWLLYLERVRRSAVAGGGRTEQEAR+DTI AFELALLHVGCNPASTPLWQ+YLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLE LWRECEEFEMAGNEVLWKTKFSL+YLPK+MAAKAVYKERKPIWDGIDPNLLAR PRG     XXXXXXXXXXXXXXXX +AQAGQY+LWKRRLA+ER+NPEL DEDGLR RVRHSYAQCL+H RH+CEIWYDLAEYE+SLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGR++EA+  WKAF+ DRR STT +VMYLRFVRRNMGKEAARRAFG TR LRR+  + +  RLYLAHASIELHVNGEPEVARRV EHGLSQHEG+V EPEYVLEYIDFLVQRNDE+NLRVLFERVLHPSAMPAERARLVWERFVQLELCLS TGGSL +AQ+VE RMNQVY D+SGPSGLLALWKRCSV+GCGMHPEG+VDSAFSDRMF ER E
Sbjct:   27 ATIPTRRLLKRQASAAGEFDYGVIGNRASDRFKTYVRRIELDPWDTDAWTGLVKEAQNNRGGGMSLKDVLRKFLKQFPTSGRYRRMLAQAEMESGDWQAADKVLQEGLETCASLELWLLYLERVRRSAVAGGGRTEQEAREDTIAAFELALLHVGCNPASTPLWQKYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEPLWRECEEFEMAGNEVLWKTKFSLEYLPKHMAAKAVYKERKPIWDGIDPNLLARPPRGHXX--XXXXXXXXXXXXXXXXEEAQAGQYRLWKRRLAFERTNPELTDEDGLRARVRHSYAQCLSHLRHFCEIWYDLAEYEYSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRIEEADAAWKAFLKDRR-STTGHVMYLRFVRRNMGKEAARRAFGATRALRRAGLVGY--RLYLAHASIELHVNGEPEVARRVLEHGLSQHEGYVAEPEYVLEYIDFLVQRNDEENLRVLFERVLHPSAMPAERARLVWERFVQLELCLSSTGGSLAKAQDVERRMNQVYQDNSGPSGLLALWKRCSVAGCGMHPEGEVDSAFSDRMFFERRE 614
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A0A9DS54_ARUDO (Suf domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DS54_ARUDO)

HSP 1 Score: 293 bits (749), Expect = 1.050e-86
Identity = 171/459 (37.25%), Postives = 266/459 (57.95%), Query Frame = 1 
Query:  820 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLE 2193
            I  K+L  FPT+ ++ +  VQA M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y+ ++KS     P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR LA+E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D AA ++++A++ IP S++L+ A A++EE RG +  A TI+++ IA+    T+ A++ ++RF+RR+ G EAAR+ F D RK       + T+ +Y+A+A+I   ++ + +VA+ VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S +PAE +  VW+RF Q E
Sbjct:   43 IYEKLLATFPTAAKYWKQYVQAYMATNNDEATKQIFSRCLLNCLHINLWCCYINFIRRVNDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYIAFLKSMPAVMPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKYIDDIDWNVLAIPPTGSY---------------------KEEQQCMAWKRLLAFEKGNPQRIDATTANRRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSLDSAAKIFQRALKAIPDSEVLKYAFAEMEESRGAIQTAKTIYESLIAENANVTSLAHIQFIRFLRRSEGIEAARKYFLDARK-----SPSCTYHVYVAYATIAFCLDKDAKVAQSVFEAGLKR---FMHEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPAEESIEVWKRFAQFE 465
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A2K1KV29_PHYPA (Suf domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KV29_PHYPA)

HSP 1 Score: 304 bits (778), Expect = 2.130e-86
Identity = 183/524 (34.92%), Postives = 284/524 (54.20%), Query Frame = 1 
Query:  730 IELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLA 2298
            I ++  D DAW GL  EAQ    G      I  +++  FPTS +F ++ V+A++ + D  A  ++    L  C+ ++LW  YL  +R+     G     E R++  KAFE  L H+G +  + P+W  Y+ Y+K+    +P ++  +MTA+RK Y++ V  P+  +E +W+E E FE + +  L K   + +Y PK+ +A+AVY+ERK   D I+ N+LA  P G                        +  Q   WK+ L +E+ NP+ +D  GL   V  +Y QCL +  HY +IWYD A +    G  D AA ++++A++ +P + +L  A A+ EE RG V EA  +++    + +T+   A +  +RFVRR  G EAAR+ F + RK         T+ +Y+A A++EL V+ +P+VAR +FE GL +   ++ EP YVLEY DFL + NDE N+RVLFER L  S +PAE +  VW RF+  E    +T G L     VE R  +  + +     L+A
Sbjct:  104 ILINPHDVDAWNGLCNEAQMKPIG--DAVPIYEELVSTFPTSAKFWKVYVEAQLTANDDDAVKQIFSRCLLQCLHVDLWRAYLRYMRKVNENRGS----EGREEMKKAFEFMLGHIGFDINAGPVWLEYISYLKAAPAATPQEESFRMTAVRKAYQKAVLAPVHLVEQIWKEYESFENSVSRALAKGLLA-EYQPKHFSARAVYRERKKYCDHIETNMLAVPPTGSY---------------------KEEQQCIAWKQLLKFEKGNPQRLDPVGLTKHVAFTYEQCLMYLYHYPDIWYDYATWHAQNGSPDSAAVIFQRALKALPDTAVLHYAYAEFEEARGAVKEAKAVYETLTTNSKTADALAYIQLMRFVRRTEGIEAARKIFLEARK-----SSACTYHVYVASATMELCVDKDPKVARNIFELGLKK---YIHEPAYVLEYADFLCRMNDERNVRVLFERAL--SVLPAEESAEVWNRFLAFE----QTYGDLASTLKVEQRRKEALSQAGDDGALVA 585
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A388JTY0_CHABU (Suf domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTY0_CHABU)

HSP 1 Score: 306 bits (783), Expect = 3.870e-86
Identity = 181/541 (33.46%), Postives = 298/541 (55.08%), Query Frame = 1 
Query:  682 AIGNRASDRFKAYVRRIELDQWDTDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIA-DRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGLLAL 2301
            ++G+  +D+     +RIE +++D +AW  L  EAQ       +L +    IL  FP+S R  +M  + ++ +G+  A   +    L NC+ ++LW  YL  +R+      GR   E R++T +AFE  L HVG + ++  +W  Y+ ++KS    +  ++  +MTAIRKVY+RV+ +P+ G++GLW++ E FE + +  L K   + +Y PK+ +A+AVY+ERK  ++ +D  +LA  P G                      D Q  Q   WK+ +A+E+SNP+ +D      RV  +Y QCL +  HY ++WY+ A ++   G+ D A  V+++A+  +P S +L  A A+ +E  G V +A +++ A I  D   +  A + ++RF+RR  G +AAR+ F   RK         T+ +Y+A A +EL ++ +P+VAR +FE GL +   ++ EP Y+LEY+DFL+Q ND+ N+R L ER L  S +P E +  VW++F++ EL      G L     VE R  +V  D    +  L L
Sbjct:  158 SVGHAPTDKELRARKRIESNKYDLEAWGWLTTEAQARPAESAALYEF---ILSCFPSSARHWKMYAETQISAGNDDAVKSIFSRSLLNCLHIDLWRCYLRYIRK---VNDGRGV-EGREETKRAFEFMLEHVGYDISACQIWMEYISFLKSIPGGTAQEESQRMTAIRKVYQRVILIPMHGIDGLWKDYESFENSVSRALAKGLLA-EYQPKHFSARAVYRERKKYFEHLDLGMLAVPPSGS-------------------LKDEQ--QCVNWKKLIAFEKSNPQRLDAAMCAKRVAFTYEQCLMYLYHYPDMWYNYATWQAEQGQHDPAVRVFQRALMALPDSAVLHYAFAEYQESNGNVRDARSVYDALIRNDAAANALAYIQFMRFIRRTEGVDAARKVFMAARKSPMC-----TYHVYVASAKMELCIDKDPKVARNIFELGLKK---YIHEPAYILEYLDFLMQLNDDRNIRALLERAL--SVLPPEESAEVWDKFLEFELLY----GDLQSVLKVEKRRREVLQDGGEGTNTLLL 655
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: G7KP74_MEDTR (Cleavage stimulation factor n=4 Tax=Trifolieae TaxID=163742 RepID=G7KP74_MEDTR)

HSP 1 Score: 295 bits (756), Expect = 4.290e-85
Identity = 181/556 (32.55%), Postives = 299/556 (53.78%), Query Frame = 1 
Query:  736 LDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYND---SSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFV 2382
            +D+++ ++   L  EAQ      +S+ +   I  ++L+ +PT+ +F +  V+A M   +  A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAFE  L +VG + AS P+W  Y+ ++KS     P ++ ++MT +RKVY+R +  P   +E LW++ + FE + ++ L K   S +Y PKY +A+AVY+ERK  +D ID N+LA  P G                        +  Q+  WK+ L++E+ NP+ ID      RV  +Y QCL +  HY ++WYD A +    G  D A  V++++++ +P S++LR A A+LEE RG +  A  I++  + D   +T  A++ ++RF+RR  G E AR+ F D RK       + T+ +Y+A+AS+   ++ +P++A  VFE GL     F+ EP Y+LEY DFL++ ND+ N+R LFER L  S++P E +  VW+RFV+ E    +T G L     VE R  + + +   ++  S L  +  R S          D+D+       V
Sbjct:    2 VDKYNVESAEKLANEAQ-----ALSIAEATPIYEQLLQLYPTAAKFWKQYVEAHMAVNNDDAIKQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGA----EGQEETKKAFEFMLSYVGSDIASGPVWMEYIAFLKSLPAAHPQEETHRMTVVRKVYQRAIITPTHHIEQLWKDYDSFESSVSQKLAKGLIS-EYQPKYNSARAVYRERKKFFDEIDWNMLAVPPTGSH---------------------KEEMQWMSWKKLLSFEKGNPQRIDIASSNKRVIFTYEQCLMYLYHYPDVWYDYATWHAKAGSIDAAIKVFQRSLKALPDSEMLRYAYAELEESRGAIQAAKKIYENLLGDSENATALAHIQFIRFLRRTEGVEPARKYFLDARK-----SPSCTYHVYVAYASVAFCLDKDPKMAHNVFEAGLKH---FMHEPVYILEYADFLIRLNDDQNIRALFERAL--SSLPLEDSVEVWKRFVKFE----QTYGDLASMLKVEQRRKEAFGEEATAASESSLQDVVSRYSFMDLWPCSSNDLDNLSRQEWLV 512
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A5E4FC55_PRUDU (PREDICTED: cleavage stimulation factor n=2 Tax=Amygdaloideae TaxID=171637 RepID=A0A5E4FC55_PRUDU)

HSP 1 Score: 290 bits (743), Expect = 5.630e-85
Identity = 175/529 (33.08%), Postives = 288/529 (54.44%), Query Frame = 1 
Query:  724 RRIELDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADR-RTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS--GPSGL 2292
            R++  D+++ +A   L  EA +     + + +   I  ++L  FPT+ ++ +  V+A+M   + +A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    S  ++  +M A+RKVY++ +  P   +E LW+E E FE + +  L K   S +Y PK+ +A+AVY+ERK   DGID N+LA  P G                        +  Q+  WK+ LA+E+ NP+ I+      R+  +Y QCL H  HY ++WYD A +    G  D A  V++++++ +P S++LR A  +LEE RG +     I+++ + D   T+  A++ ++RF+RR  G EAAR+ F D RK         T+ +Y+A+A +   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S++P+E +  VW+RF   E    +T G L     VE R  +  + +   GPS L
Sbjct:   13 RKLVDDKYNVEATESLANEALH-----LPISEAAPIYEQLLTVFPTAAKYWKQYVEAQMVVNNDEATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----VEGQEETRKAFDFMLSYVGADIASGPVWMEYITFLKSLPALSTQEESQRMIAVRKVYQKAIVTPTHHIEQLWKEYENFENSVSRQLAKGLLS-EYQPKFNSARAVYRERKKYVDGIDWNMLAVPPTGSY---------------------KEESQWMAWKKLLAFEKGNPQRIENGSSNKRIIFTYEQCLMHLYHYPDLWYDYAMWHAKSGSIDAAIKVFQRSLKALPDSEMLRYAYGELEESRGAIQPTKKIYESLLGDGVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNC-----TYHVYVAYAMMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLTRLNDDRNIRALFERAL--SSLPSEESVEVWKRFTSFE----QTYGDLASMLKVERRKKEALSGTGEEGPSSL 496
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A445FD46_GLYSO (Cleavage stimulation factor subunit 77 isoform C n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FD46_GLYSO)

HSP 1 Score: 289 bits (739), Expect = 1.680e-84
Identity = 170/492 (34.55%), Postives = 276/492 (56.10%), Query Frame = 1 
Query:  820 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSSGPSGL 2292
            I  ++L  FPT+ +F R  V+A M + +  A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    +  ++ ++MT +RKVY++ +  P   +E LW++ E FE + +  L K   S +Y PKY +A+AVY+ERK   D ID N+LA  P G                        +  Q+  WKR L++E+ NP+ ID      R+  +Y QCL H  HY +IWYD A +    G  D A  V+++A++ +P S++LR A A+LEE RG +  A  I+++ + D  ++TT +++ ++RF+RR  G EAAR+ F D RK       + T+ +Y+A+A++   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL++ ND+ N+R LFER L  S++P E +  VW++F + E    +T G L     VE R  +  + +   + L
Sbjct:   33 IYEQLLLLFPTAAKFWRQYVEAHMAANNDDATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----MEGQEETRKAFDFMLNYVGADIASGPVWMEYIAFLKSLPAINAQEESHRMTTMRKVYQKAIVTPTHHIEQLWKDYENFENSVSRQLAKGLIS-EYQPKYNSARAVYRERKKYVDEIDWNMLAVPPTGSY---------------------KEEMQWMAWKRLLSFEKGNPQRIDTASSNKRIIFTYEQCLMHMYHYPDIWYDYATWHAKGGLIDSAIKVFQRALKALPDSEMLRYAYAELEESRGAIQAAKKIYESVMGDGDSATTLSHIQFIRFLRRTEGVEAARKYFLDARK-----SPSCTYHVYVAYATMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLIRLNDDQNIRALFERAL--SSLPPEESVEVWKKFTKFE----QTYGDLASMLKVEQRRKEALSGAEDGTAL 484
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A1B6PAU9_SORBI (Suf domain-containing protein n=16 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PAU9_SORBI)

HSP 1 Score: 293 bits (751), Expect = 4.160e-84
Identity = 173/487 (35.52%), Postives = 273/487 (56.06%), Query Frame = 1 
Query:  820 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS 2277
            I  K+L  FPT+ ++ +  V+A M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y++++KS    +P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR L +E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D A+ ++++A++ IP S++L+ A A++EE RG +  A TI+++ + +  + T+ AN+ ++RF+RR  G EAAR+ F D RK       + T+ LY+A+A++   V+ + +VA+ VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S +P E +  VW RF Q E       G L     VE R  +  + +S
Sbjct:   42 IYEKLLATFPTAAKYWKQYVEAYMATNNHEATKQIFSRCLLNCLHISLWRCYINFIRRINDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYINFLKSMPAVTPHEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKFIDDIDWNVLATPPTGSY---------------------KEEQQCMAWKRLLVFEKGNPQRIDATTANRRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSMDSASKIFQRALKAIPDSEVLKYAFAEMEESRGAIQTAKTIYESLLGENASVTSLANIQFIRFLRRTEGIEAARKYFLDARK-----SPSCTYHLYVAYATMAFCVDKDAKVAQSVFEAGLKR---FMHEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPPEESTEVWRRFAQFEQIY----GDLSSMLKVEQRRKEALSRTS 488
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A5E4FCZ5_PRUDU (PREDICTED: cleavage stimulation factor n=4 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FCZ5_PRUDU)

HSP 1 Score: 290 bits (743), Expect = 7.340e-84
Identity = 175/529 (33.08%), Postives = 288/529 (54.44%), Query Frame = 1 
Query:  724 RRIELDQWDTDAWTGLVKEAQNNRGGGMSLKD---ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADR-RTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS--GPSGL 2292
            R++  D+++ +A   L  EA +     + + +   I  ++L  FPT+ ++ +  V+A+M   + +A  ++    L NC+ + LW  Y+  +R+     G     E +++T KAF+  L +VG + AS P+W  Y+ ++KS    S  ++  +M A+RKVY++ +  P   +E LW+E E FE + +  L K   S +Y PK+ +A+AVY+ERK   DGID N+LA  P G                        +  Q+  WK+ LA+E+ NP+ I+      R+  +Y QCL H  HY ++WYD A +    G  D A  V++++++ +P S++LR A  +LEE RG +     I+++ + D   T+  A++ ++RF+RR  G EAAR+ F D RK         T+ +Y+A+A +   ++ +P++A  VFE GL +   F+ EP Y+LEY DFL + ND+ N+R LFER L  S++P+E +  VW+RF   E    +T G L     VE R  +  + +   GPS L
Sbjct:   13 RKLVDDKYNVEATESLANEALH-----LPISEAAPIYEQLLTVFPTAAKYWKQYVEAQMVVNNDEATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKKG----VEGQEETRKAFDFMLSYVGADIASGPVWMEYITFLKSLPALSTQEESQRMIAVRKVYQKAIVTPTHHIEQLWKEYENFENSVSRQLAKGLLS-EYQPKFNSARAVYRERKKYVDGIDWNMLAVPPTGSY---------------------KEESQWMAWKKLLAFEKGNPQRIENGSSNKRIIFTYEQCLMHLYHYPDLWYDYAMWHAKSGSIDAAIKVFQRSLKALPDSEMLRYAYGELEESRGAIQPTKKIYESLLGDGVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNC-----TYHVYVAYAMMAFCLDKDPKMAHNVFEAGLKR---FMHEPVYILEYADFLTRLNDDRNIRALFERAL--SSLPSEESVEVWKRFTSFE----QTYGDLASMLKVERRKKEALSGTGEEGPSSL 496
[Close]
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Match: A0A2T7DSZ3_9POAL (Suf domain-containing protein n=9 Tax=Panicoideae TaxID=147369 RepID=A0A2T7DSZ3_9POAL)

HSP 1 Score: 291 bits (746), Expect = 2.480e-83
Identity = 174/487 (35.73%), Postives = 278/487 (57.08%), Query Frame = 1 
Query:  820 ILRKILKQFPTSGRFHRMLVQAEMESGDWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIKAFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRRVVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKERKPIWDGIDPNLLARTPRGIDGDGXXXXXXXXXXXXXXXXXDAQAGQYKLWKRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFSLGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIADRRTSTT-ANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLAHASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDEDNLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENRMNQVYNDSS 2277
            I  K+L  FPT+ ++ +  V+A M + + +A  ++    L NC+ + LW  Y+  +RR     G     E  D+T KAF+  L +VG + AS P+W  Y+ ++KS    +P ++ ++MT +RKVY++ + +P + +E LW++ E FE + +  L K   S +Y PK+ +AKAVY+ERK   D ID N+LA  P G                        +  Q   WKR LA+E+ NP+ ID      RV  +Y QCL +  H+ +IWYD A +    G  D AA ++++A++ IP S +L+ A A++EE RG +  A TI+++ + +  + T+ A++ ++RF+RR  G EAAR+ F D RK       + T+ +Y+A+A++   ++ + +VA+ VFE GL +   F++EP Y+LEY DFL + ND+ N+R LFER L  S +P E++  VW+RFVQ E    +T G L     VE R  +  + +S
Sbjct:   50 IYEKLLATFPTAAKYWKQYVEAYMATNNDEATKQIFSRCLLNCLHISLWRCYINFIRRINDKRGS----EGLDETKKAFDFMLNYVGNDAASGPVWMEYITFLKSMPAVTPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLLS-EYQPKFNSAKAVYRERKKYIDDIDWNVLAVPPTGSY---------------------KEEQQSMAWKRLLAFEKGNPQRIDVTTANKRVTFTYEQCLMYLYHHPDIWYDYAMWHAKNGSMDSAAKIFQRALKAIPDSAVLKYAFAEMEESRGVIQTAKTIYESLLGENASVTSLAHIQFIRFLRRTEGIEAARKYFLDARK-----SPSCTYHVYVAYATMAFCLDKDAKVAQSVFEAGLKR---FMQEPGYILEYADFLCRLNDDRNVRALFERAL--SLLPPEKSIEVWKRFVQFE----QTYGDLSSMLKVEQRRKEALSRTS 496
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1249.2025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMJ6_ECTSI0.000e+087.69Suf domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A0A9DS54_ARUDO1.050e-8637.25Suf domain-containing protein n=1 Tax=Arundo donax... [more]
A0A2K1KV29_PHYPA2.130e-8634.92Suf domain-containing protein n=4 Tax=Physcomitriu... [more]
A0A388JTY0_CHABU3.870e-8633.46Suf domain-containing protein n=1 Tax=Chara brauni... [more]
G7KP74_MEDTR4.290e-8532.55Cleavage stimulation factor n=4 Tax=Trifolieae Tax... [more]
A0A5E4FC55_PRUDU5.630e-8533.08PREDICTED: cleavage stimulation factor n=2 Tax=Amy... [more]
A0A445FD46_GLYSO1.680e-8434.55Cleavage stimulation factor subunit 77 isoform C n... [more]
A0A1B6PAU9_SORBI4.160e-8435.52Suf domain-containing protein n=16 Tax=Andropogone... [more]
A0A5E4FCZ5_PRUDU7.340e-8433.08PREDICTED: cleavage stimulation factor n=4 Tax=Pru... [more]
A0A2T7DSZ3_9POAL2.480e-8335.73Suf domain-containing protein n=9 Tax=Panicoideae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1249contigL-elsbetiae_contig1249:11295..26990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1015.8
Seed ortholog evalue1.2e-293
Seed eggNOG ortholog2880.D8LMJ6
KEGG koko:K14408
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mRNA processing
EggNOG OGsCOG0696@1,KOG1914@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Ec32 ortholog descriptionSuppressor of forked
Ec32 orthologEc-05_002990.1
Exons15
Model size2454
Cds size2451
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815442.6195202-CDS-L-elsbetiae_contig1249:11294..118161622815442.6195202-CDS-L-elsbetiae_contig1249:11294..11816Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 11295..11816 +
1691682900.4155457-CDS-L-elsbetiae_contig1249:11294..118161691682900.4155457-CDS-L-elsbetiae_contig1249:11294..11816Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 11295..11816 +
1622815442.6342652-CDS-L-elsbetiae_contig1249:12842..130271622815442.6342652-CDS-L-elsbetiae_contig1249:12842..13027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 12843..13027 +
1691682900.4306028-CDS-L-elsbetiae_contig1249:12842..130271691682900.4306028-CDS-L-elsbetiae_contig1249:12842..13027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 12843..13027 +
1622815442.6484087-CDS-L-elsbetiae_contig1249:13605..137251622815442.6484087-CDS-L-elsbetiae_contig1249:13605..13725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 13606..13725 +
1691682900.4397233-CDS-L-elsbetiae_contig1249:13605..137251691682900.4397233-CDS-L-elsbetiae_contig1249:13605..13725Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 13606..13725 +
1622815442.6579273-CDS-L-elsbetiae_contig1249:14281..143751622815442.6579273-CDS-L-elsbetiae_contig1249:14281..14375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 14282..14375 +
1691682900.44881-CDS-L-elsbetiae_contig1249:14281..143751691682900.44881-CDS-L-elsbetiae_contig1249:14281..14375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 14282..14375 +
1622815442.6744702-CDS-L-elsbetiae_contig1249:15084..152421622815442.6744702-CDS-L-elsbetiae_contig1249:15084..15242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 15085..15242 +
1691682900.4570496-CDS-L-elsbetiae_contig1249:15084..152421691682900.4570496-CDS-L-elsbetiae_contig1249:15084..15242Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 15085..15242 +
1622815442.6858678-CDS-L-elsbetiae_contig1249:16506..166151622815442.6858678-CDS-L-elsbetiae_contig1249:16506..16615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 16507..16615 +
1691682900.465336-CDS-L-elsbetiae_contig1249:16506..166151691682900.465336-CDS-L-elsbetiae_contig1249:16506..16615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 16507..16615 +
1622815442.6958127-CDS-L-elsbetiae_contig1249:16991..171191622815442.6958127-CDS-L-elsbetiae_contig1249:16991..17119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 16992..17119 +
1691682900.474283-CDS-L-elsbetiae_contig1249:16991..171191691682900.474283-CDS-L-elsbetiae_contig1249:16991..17119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 16992..17119 +
1622815443.645243-CDS-L-elsbetiae_contig1249:18453..186731622815443.645243-CDS-L-elsbetiae_contig1249:18453..18673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 18454..18673 +
1691682900.4850862-CDS-L-elsbetiae_contig1249:18453..186731691682900.4850862-CDS-L-elsbetiae_contig1249:18453..18673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 18454..18673 +
1622815443.657403-CDS-L-elsbetiae_contig1249:19075..191561622815443.657403-CDS-L-elsbetiae_contig1249:19075..19156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 19076..19156 +
1691682900.4983058-CDS-L-elsbetiae_contig1249:19075..191561691682900.4983058-CDS-L-elsbetiae_contig1249:19075..19156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 19076..19156 +
1622815443.6778836-CDS-L-elsbetiae_contig1249:20352..204331622815443.6778836-CDS-L-elsbetiae_contig1249:20352..20433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 20353..20433 +
1691682900.5085537-CDS-L-elsbetiae_contig1249:20352..204331691682900.5085537-CDS-L-elsbetiae_contig1249:20352..20433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 20353..20433 +
1622815443.6902893-CDS-L-elsbetiae_contig1249:22342..224851622815443.6902893-CDS-L-elsbetiae_contig1249:22342..22485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 22343..22485 +
1691682900.5188375-CDS-L-elsbetiae_contig1249:22342..224851691682900.5188375-CDS-L-elsbetiae_contig1249:22342..22485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 22343..22485 +
1622815443.7002318-CDS-L-elsbetiae_contig1249:23594..238381622815443.7002318-CDS-L-elsbetiae_contig1249:23594..23838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 23595..23838 +
1691682900.5287545-CDS-L-elsbetiae_contig1249:23594..238381691682900.5287545-CDS-L-elsbetiae_contig1249:23594..23838Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 23595..23838 +
1622815443.7117229-CDS-L-elsbetiae_contig1249:24877..250511622815443.7117229-CDS-L-elsbetiae_contig1249:24877..25051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 24878..25051 +
1691682900.5377433-CDS-L-elsbetiae_contig1249:24877..250511691682900.5377433-CDS-L-elsbetiae_contig1249:24877..25051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 24878..25051 +
1622815443.7235956-CDS-L-elsbetiae_contig1249:26153..262661622815443.7235956-CDS-L-elsbetiae_contig1249:26153..26266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 26154..26266 +
1691682900.5466633-CDS-L-elsbetiae_contig1249:26153..262661691682900.5466633-CDS-L-elsbetiae_contig1249:26153..26266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 26154..26266 +
1622815443.7363806-CDS-L-elsbetiae_contig1249:26909..269881622815443.7363806-CDS-L-elsbetiae_contig1249:26909..26988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 26910..26988 +
1691682900.557082-CDS-L-elsbetiae_contig1249:26909..269881691682900.557082-CDS-L-elsbetiae_contig1249:26909..26988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1249 26910..26988 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1249.2025.1prot_L-elsbetiae_contig1249.2025.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1249 11295..26988 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1249.2025.1

>prot_L-elsbetiae_contig1249.2025.1 ID=prot_L-elsbetiae_contig1249.2025.1|Name=mRNA_L-elsbetiae_contig1249.2025.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=817bp
LYHLWESGWDTVSQGSMPGESNSKQKDEPAKKAKKSGASTKKEKHDAKGK
GAATASKAKLTTAGAATKAKGIKKSKSSKARKTAAAKESAVVDGDDNDET
KETKTSKSKSKSKAVKVEEGKAKGGKDQQPEEPEPADGDDNDGDGDGDGD
GDERQEQELESMEEDQEAEEDAAEGDGDGEGDGEGDGDGEAESAAPVPSM
HVPTISTIPTHRRLRRQVSAAGEFDYGAIGNRASDRFKAYVRRIELDQWD
TDAWTGLVKEAQNNRGGGMSLKDILRKILKQFPTSGRFHRMLVQAEMESG
DWQAADKVLQEGLENCVSLELWLLYLERVRRSAVAGGGRTEQEARDDTIK
AFELALLHVGCNPASTPLWQRYLDYIKSWEERSPLDKGNKMTAIRKVYRR
VVALPLDGLEGLWRECEEFEMAGNEVLWKTKFSLDYLPKYMAAKAVYKER
KPIWDGIDPNLLARTPRGIDGDGGGGGSGGRDGRENKKRKDAQAGQYKLW
KRRLAYERSNPELIDEDGLRMRVRHSYAQCLTHFRHYCEIWYDLAEYEFS
LGEADRAAAVYRKAVEVIPGSDLLRVAQADLEERRGRVDEANTIWKAFIA
DRRTSTTANVMYLRFVRRNMGKEAARRAFGDTRKLRRSEELTHTHRLYLA
HASIELHVNGEPEVARRVFEHGLSQHEGFVREPEYVLEYIDFLVQRNDED
NLRVLFERVLHPSAMPAERARLVWERFVQLELCLSRTGGSLMRAQNVENR
MNQVYNDSSGPSGLLALWKRCSVSGCGMHPEGDVDSAFSDRMFVERHETW
KQRDQGQQRGDKDAKDA
back to top

mRNA from alignment at L-elsbetiae_contig1249:11295..26990+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1249.2025.1 ID=mRNA_L-elsbetiae_contig1249.2025.1|Name=mRNA_L-elsbetiae_contig1249.2025.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=15696bp|location=Sequence derived from alignment at L-elsbetiae_contig1249:11295..26990+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTACCACCTGTGGGAGAGTGGTTGGGACACTGTTTCACAGGGAAGCAT
GCCTGGAGAGAGCAACAGTAAGCAAAAGGATGAACCGGCGAAAAAAGCGA
AGAAATCCGGTGCTTCTACCAAGAAAGAGAAGCACGATGCCAAGGGGAAG
GGAGCGGCTACAGCCTCCAAAGCAAAGTTGACAACGGCAGGCGCGGCCAC
GAAGGCTAAGGGCATCAAAAAGAGCAAGAGCTCCAAGGCCAGGAAAACTG
CTGCAGCGAAAGAATCGGCGGTGGTCGATGGAGATGACAATGACGAGACC
AAGGAGACAAAGACATCCAAGTCCAAGTCCAAGTCCAAGGCGGTGAAGGT
AGAGGAGGGGAAGGCGAAGGGAGGGAAGGACCAGCAACCAGAGGAGCCAG
AGCCTGCGGATGGTGACGATAATGACGGTGATGGTGATGGTGATGGTGAT
GGTGATGAGCGGCAGGAACAGGAGCTCGAATCGATGGAAGAGGACCAAGA
GGCTGAGGAAGATGCTGCTGAGGTGAGAGCACGACCCCCCCCCCTACAAC
ACAACAGCAGTGTATGCAGGATGTACACATGTTCTTGCGTAAACAATCGG
TTGATCTACAAGGACATGCAGCCTATGTACACCCTGCATATCTGGTAAGA
CTGCTGTACCGTTTACGCCAGCTACGCACGGCATGTCCGTTGTTGTCGTT
GTTGGTGATTATTGGGAAGATTTATCAGCACACATGGCCGGCCAGAGTTT
GTGAGCCGAGTATTCTCGAGATCGGTCGGCATGTGAGACGAAAGCCACGA
TCTACTCCGCAGACTACACTCTTGTACTACTACTTAGAAGCACGAGCCTC
TAACTTCGACGGCAATGCAAAATTCAACGGATCACCTTCTCTTCCTAACC
CCCATCATTACGAGCATGGTGATTTTGCCCTCGTTCTGTCACAAACGTGT
TGGATAGATACAGTCCTACTTCGAAGTAATACACCGTGTGCTGCAGCATG
ACTGCGATCCCACCCCCTCCGCCCATGCATGTTGCTCCGTGCGCCTCGTT
TTCTCGGCGTCCGGTGCTTGTTGCTTGCTTCCCCGCTTGTTTAGTGCGTG
TACAAAATTCCATCTTGGTTCCCCTGTCTGTGATATGTACAGAGTGCATA
CAGCACGCCCCCCCTTTTGCTAGCATATACGTTTGATACATCAGTTGATA
CGGAGTATTGTGTAGTATCTTGACACGAAATGACCAGTATTCTACGCAGG
GTTTTCATCTTTTCATATTCAGCTAACATATGGGATAAAGTATGGGGACT
GGGAAAGGGGGGTCGGTGGTTGGGGTTAGGGTTAAAGTGTTTTTCCTAGA
TAAAACTTAAATCCGGCGTATGCGGTCCGAAATGGTGTACACAGCAGATG
CAGCAAGGTACTTCGTGCTACCAGGTACCTGATACCATATACCATGTGTA
CGTGTTGTGCTCTCTTGCGCTTCGGTGCTCGTTTTAATATCAACGTTCAG
CTGCGTGACATGACATGAAGTATTGCCGTGTGTTCTGTGTCAAGGAAGGG
CGATGGTGATGGTGAAGGTGATGGTGAAGGTGACGGCGACGGCGAGGCCG
AGAGCGCCGCCCCTGTCCCATCGATGCATGTACCCACGATATCCACGATA
CCGACCCACCGGAGGCTTCGGCGTCAAGTGTCTGCGGCCGGGGAATTCGA
CTACGGCGCCATCGGCAACCGCGCCTCAGACAGGTTAGCTGAGTGCGTAG
CGCTGTGCGCGTGCGTTGAGTGCATGTGCTGGCATCATGTGCCGATATCA
TGTGCTGAGATCATGCGCTGAGAGGAGATGCTGATGTTATGTGGTAAGAA
GATGTGCTGAGAGCATGTGCTGAATGTGCGTGTTGAGTGCATGTGCTGGA
AGCATGTGCTGGAAGCAGCAAGTATGCTGAAAGCATGTGGTGAGAACACG
TGCTGAGTGCGTGTGATGCAGGCCTGATCTGACTTGATCTGACCGGATTG
GTCGCAGCACGAAGACGGCGACATTTTAAGATGTACTTCTTAGATGGCAG
TGAAGTGAACGTGACGGAACGACTGGTTTGGCTTGACTGCTGGTAGGCCT
GGTGTGATGTGATGGGACTCGATTGGCCAGCGCAGGCCTGGTTCCGTGGT
CGTAAAACGCCTCGCTGATGAACTCAAGTGTGTGTACGCAAGCACCACAT
TTACTGACTGTAACGTCAGCGACCAGCCTCCGACCAGAATGAGATTGTAC
CTTGTAACGAGCGTATTTACCCTCCTCTAACAACCTTTGTTGTTTTGATA
CTTGAGATCAGATTTAAGGCGTACGTGAGGCGCATCGAGCTGGACCAGTG
GGACACGGACGCCTGGACGGGGTTGGTTAAGGAGGCGCAGAACAACCGGG
GGGGTGGTATGAGTCTCAAGGACATTTTAAGGTACAGTACAATGAAGGCA
TGAGTCCGAAAGGCGATTAAAAGTACATTATCAAGCATGAGAGCATGCCT
ATCAAGGACGTTTTAAGGTACAGTATCATGATCCTCGATGCCTATTTAAA
CATACATGAAAGCATGCCTCTCGAGGGCGTTCTGAGGTGCAGTATCATGA
TCCTCGATGACGTTTTCAAGATACATTATCAAGATCAAGCATGAGAGCAT
GCTTCCTTTGGACGTTTTAAGGTACAGTACCAAGAACGAGGACAGGAGCC
TCAAGGATGTCTGTTGCCAGGTTTTCTGAATTGCGAAGGCTGAGGAGACA
AATAAATGCCTGGGAGCAGGCTCGTTGAACTTGAACTGAAGCTAAGTTTG
TTGCGAGGCACCATACTCCGTACAAGGATGTTCAGGCCACTTACTCTCTC
ACTCTTCGAGGCTCAGGCAAACGGCAAAACAACACAGCGTTTTTTTTCTC
GGCTCGTAAAGCCTTGTGCTGTGGATACTTACCGGTACATTCTTGTTTTT
GTTGACGGTATATGTATACCCGATACGCTGGCGGCAGGAAAATTCTGAAG
CAGTTTCCGACGTCCGGGAGGTTCCACCGCATGCTGGTGCAGGCGGAGAT
GGAGAGCGGTGACTGGCAGGCGGCGGACAAGGTCAATACTCCGAGTGCTT
AGTTCCTGGATAAAGTTAATGTGTGCGGTAGTTGATAGAAGAGTTGCGTT
GAGCGACTCCTACCCAGGCCAGGTGCTAGCTACATCACCCAAACGCGGAA
CGCATCTGCTGAATGTTACGTAATTTGTATGCCCAAACATAGGTGTTGGC
TGCCATGGTTGTTGATGTTGGTGTTTTGTGGTGGTGGCGGTTGTCACGCT
CTTGTAACGGCCGAACGAGCTGTTGTTAGGTACAGCCGAACGATAATGCG
GCGCAATCGAACGAAGTGATTTGTGACCTCCGTGGCAGCTGCACTACACT
ACGGTTCTTGTTGAACGACGTTATGCCAATAAGCTCCCCTGATTTCTTCG
TGCACGCTTTTTGGCACGGTGTGAGTGGATGTATCGGCCCCCGTGGATGC
GGATGGCGTCATATGTATAATAGGAGTATGTAGTTAAATATAAATCAGTG
AATCAAAAATGGAACCTAGCCCACATGAGAGCAAGACTCTATGGGTTTCA
GACGATATTCCACTAAGTGACGTAATATTGGTTCAGTAGAGTAGAAAAAG
TTGTGATTTTATGTGTGTTTGTGTAGTTGTGCTTTATGTGTGTTTTGTGT
TTTGTCCCGTCACTTGGACCACAGCATCGACGACAGAGTCGAACCGAACC
GGCAGTATTTGTCAAATATCCACACAACGAACCACAACAGGTGCTGCAAG
AAGGATTGGAGAACTGTGTGAGCTTGGAGCTGTGGCTCTTGTACCTCGAG
AGAGTGCGGCGGTCGGCTGTTGCCGGCGGTGGCCGAACGGAACAGGAAGC
GAGGGACGACACCATCAAGGCTTTCGAGCTCGCCCTACTGCACGTGGGGT
GAGCCTTGGTCTTGTGCCGTAGCTTGCAGCCTCATCATCAGCCTTCGTTT
CTGTTGTGTTGCTGTGGCGGTGACATTAATAACATGAATACCGTAGGTGG
CACGAGTTCGCACGCGAGTCCGATCGGTTCATACTACATACGGAGTATAT
CATTTGAAGCTGGCCGTTTTATCCCACGGGGTGCGATCTTACCGGTCCTG
CGCGAACTGACTGCCCTGTGCGAACTCACGCACTTTTACGGTACACAAGC
AACAAAAGCGGATATGGTAACTGGTAGACTTTGGTCTGGGTCTGCTTTTA
TGGTGATGGTTACCGTAGGTGACACAAGATGCCACCCCCCGTGGACCGAG
TTTGGAGCTCCATTACTCCCTAACGAAGAGGGTGCCAGCACCAAACGACA
CCTTTTCGGACAGTCCTCGACCAGATATTTCCAACCCCACTCCCGTCCGG
CACTGGCACTCTTCTTGCTGGGGAGGAATCGAGCTTTGAAAATCTGTCCA
GGGGGGTGATAACGTGTGTCATCTACGGTACACCGTCAAGGCCAAGGCGT
AGCTTGCGACGATCGACTTTTGGCTCGATGTGGTGAATGGAAGCATCAAA
ACCTCGATGGACATATCAAGTCAAGTGACCAGTGGTCCTTTGCTCGTAGT
GGCGAATGACAGCGCTTTTACGGTAGACCAGCATCCAAACCTCGATGGAC
ATACATATCAAGTCAATTGACCGGCAGTCCTTTGCTCGTAGTGGTGAATG
CCAGCGATCTTACGGTAAACCAGCATTCAAACCTCGATGGTCATATCAAT
TAAAGTCACCAGTGGTCTTTTGCTCGTAGTGGCGAATGGCAGCGCTCTTA
CGGTAAACCAGCATCCAAACCTCGATGGACATATCAATTCAAGTCAAGTG
ACCAGCAGTCCTTCGCTCGTAGTGGTGAAGGCCAGCGCGAAAAAGGGCAT
CGAGATCGAATTTGGTTTGTCAAGCTTGAAGATATAGACGAAGGACAGGA
GGAATATGTGCTACGCAGCAGTGACGACTCGAGGAAAGTCTTGAGTACAC
CCCCCGGGTCCATTTTATGTTTTTGTACCTTTTGTTTTAGGTATAAGTAA
GTTAGCCTGTGACGACGGGAATTGACCGCATCGGCTATTGGAATAGTACA
CCCCTAGGGGGGTACTGGGTGGAGAGATCAGAGCGGTTTTTAATGTGAAG
AAACAACAACAAAGTAAGATTTTGTGACAGACGAAAGGCCTTCACCTTGG
TTGGCTTTGCAGGTGCAACCCCGCGTCAACGCCCCTCTGGCAGAGGTACC
TGGATTACATCAAGAGCTGGGAAGAGCGGAGCCCCCTCGACAAGGGCAAC
AAGATGACTGCCATCAGGAAGGTAAGAGAGGTCTATTACCAGACAGCGGC
ACTTTTTGTATTGGGATTTTACCAGCTTCTGAAAAGCCTCCATGCGTCCT
GCGAACCACTCTCCACCCCATGATAACCACATGCATGCCTCGTCTACGCC
TGCGTTTTCGTTTTGTGGATCGGTGTACCGGATAGTTGTGGCTTGGACCA
CGCACTCACCCATATAACAACCACATACATACATGCATACCTGATCTACG
GCTGCGTTTCCGTGTTGTATTCTCAAATGTAATATGCCGGCGAGTTGTGA
CTTGAACCCCTCAACCATCCATAACAACCACATTCATACTACAACATTCC
TGGTCTACGGCTGCGTCTTTGCTTCCGTTTTATGCATGCATCTGTAGGTG
TACCGGCGAGTCGTGGCTCTGCCCCTGGACGGGCTGGAGGGGCTGTGGAG
AGAGTGCGAGGAGTTCGAGATGGCCGGGAATGAGGTGCTGTGGAAGACCA
AGTTCAGCCTGGATTATTTACCAAAGTGAGCATGTTCAATAGAGTGTGAC
TATTCACCCGAGTGAGGCTCTTTAAATGGAATGGTACTGCTGTTTACACA
GATTCGGTCCAGTGTTTACCCAAGTGTTAATCATATAGTGAGGCCTTTGA
TGGAATGGTACTGTTGTTTACACAAATTCGATCGGGAGCACTATTAACAG
CGTGAGGCCTTTGATGGAATGTTATTGTTTGCCAAAATTTAGTCTGGATC
ATGCACCCAAGCGGTCGATTGGTAAGAGTGCTTACCCAAATTCAGTCTTG
ATCGTTTACCCCCCAAAAAAGGGAGCGTTATTAACAGCCTGAGGCCTTTA
ATGGAATGTTAACGTTTACCCAAATTCAGTCTTGACTGTGTACCCAAACG
GATCTATTAGTGAAAGTGCTTACCTAAATCCAGTCTTTACTGTTTACCCA
AGCGAGCCGGCGAAGCGAAGCAGATAAGGTAGACAGCAGTTAAAGTGGTC
CAATAGTGGGGTGTTCACCCAGATAAGATAGACTGCAGATAAAGTGGTAG
TACAATAGTGGGGTGTCCATCCAGGTGAGCGTGTGCTGTCCACCCGAAGT
GAGCCGCAAAGCGAGGCCTACGGTAGTGTAGACCATTCCTCACCGGCTGC
CTGCAGAGAGTTGAACGATGTAGGCCGAAAATGCTGAAAGATCCGGAGTG
CAGCTGAGAGCAGTTAAGGGGATGCGCCAGGAAAGCCGAAACCTATCCGG
CCTCGGGGAATAAAGAGAAATCTATACCTCTGTGCGCGCCCGTAGAGGTG
CAGGCATGGAAGGCATACCCCTGATGCGCCTGGCCTATCGACATGGGCGT
ATTTTTGCGGCATCTTTTTACGATAGGGGCCCTGCTTTTTGCGCTTTCGA
TTTCGTTCATACGTGGCTTCGATTTACAGTCACGGGGATTCATGCACCCA
CCCCATATCTGCACAGGGGCGACGACAAGTCGATGACGATGTTTGAGAAG
TGGCTTTAGTTCAGCATCATTTCTGTAGTGCGTGGGGGAAGGAGGGGTCA
CGTGATGTGAAAGCCAAGAAGAAGCAAGTACGAAATAGATGTGCTCGTGA
CCTCTATCACAGGCTGGCTGGCTGTTGCCGGAAAACGAATCCCGAACCCC
TTGCGAAAAATGGCGCCGCCATTTAGTCAACGAATAGTCCAGTCTACAGT
CCTCTTTTTTTAAGTGAGGTGTAATTTACCATATGTGCGGTTTTTCTTCG
TATTTCCTCCTTTTGTCAGTATTTGTTTTCCTTTTTCCTTTTCGCAATCC
TCACGGCATCCCGTCTTCGTATACATGTCGTTGCGGCGTGGTGTGGTGTG
GCGTTCCAGGTACATGGCAGCTAAGGCCGTTTACAAGGAGAGGAAGCCGA
TCTGGGACGGCATCGACCCAAACCTTCTAGCCAGGACTCCAAGAGGGATC
GATGGCGACGGCGGCGGCGGCGGTAGCGGCGGTAGGGACGGCAGGGAAAA
CAAGAAGAGAAAAGATGCGCAGGCTGGGCAGTACAAGCTGTGGAAGAGGA
GGCTGGCCTACGAGAGGTCCAACCCGGAGGTACATACATGCATTTCGTAC
ATGCATACCGTAGGTGACACAAGACACCACACCCCCTGGACAGATTTTCG
AAGCCCGATGCTTCCCCAGCAAGAAGGGTGCTAGTGCCGAAGGGGGTGGC
GTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAATGTGTTGTTTAGTGCTA
GCACCCTCTTCGGTACGGAGTAATGGAGCTCTAAAGTTCGATTCAGGGGG
TGTGGTATCTTGTGTTACCTACGGTTGGCGTTCGTGTTGTCGTAATATTT
ATCATGCAATCTGGTGTATGTACGTACAATTTTACTGCGAAACGTGACAC
GTGACACGCCTGCTTTGCGAATCACGCCCACTCCTCGCGAACTGATATTT
ATATTTCTGCGACACATGTCCGATCCGACAGCTGATAGATGAGGACGGGC
TACGGATGCGAGTCCGGCACAGCTACGCCCAATGCCTCACCCACTTCCGG
CATTACTGCGAGGTGAGGGTTTTTGCGAATCCTCCTTTGCGGGCAGTCCC
GCCGTCGTTTTGGTGTTGTTTTCTTTTGTTTTGCTGTTCCTGATGCTGTT
GTTTCATTGTCATGGTGGCGACCCTTGTGTATAACCGTACACGATACAAC
ATAACACACACACACCCTGGACCAATTTTCAAAGCTCAAGTACTCGACAG
CGAGAAGAGTATCAGTCCCAGTCCCGAAAAGGGCGGCGGCGTTGGAAATA
TCTCACCAAGAACTGCCCGAAAATAAATGTGTCGCTTGGTGTTATAGTCA
TACTCGTTGCGGAATAGCCAAGCTTTGAAAATCGGTCCAGGGGGGGGTGT
TATCTTGTGTCGCATAAACACGGTATGTAGATGTGCCGTGTTTTGTGCCG
TGCCGTGCGGTGCGAGAACGTTTTACATACGTACCCGCAAGACGAGAAAA
GTAGTTTAGCATCGCTATGGCTGGCATAGGCGTATCGACCGAGGTATCGG
GAGTACCGATGTTAGGGTGGGTCTTGCAGCGTGCCGGTTCACACGTGCCG
GTTCACACGTGCCGGTTCACACCGGCAGGCACAAGGTCGGTGTAGCGTAT
CGGTTCACTGGTGAAGGATTTTTTTTTCGGGCAGTGGTTGATGGTTGGTT
CTTGGTGGGAGAGTTCCGCCACTCTCGTGTCCTAGATCATTCATTCATGC
ACGCCGTGATGATGACGTGGTGATGACGTGGTGATGACGTCATGGACCCC
CCCCCTCCGTGCCCGTCTCGTCTCCGCGTCCATTTTGATTATTTTGTCTC
GATGAATACCGTACGTGCGAACCTTGATTGGTGTAGGTGTTGCGCCTGCC
CCCCCGAATGTGCCGATGGATTATGAGAGCTGTTTTATTTTTGTCGTTTT
TTTTCCATTCATTTGTTGCTCCTCCACAGTAGTTTCGTCCCCTGGACATG
ATAAACCTACCGTTACACAATTGAAACCTAAATGCACCCCCAGACCCATT
GTTCATGTTGTCCTGCATGTTATGTATTTATTTATTTTTCTTTCTTCCCA
TGATTGGCTTATTCGTCGTCTGCCCCACTGGCCCCCTTCCTCCACTACGA
TATGTGTGTTGTGTAGATCTGGTACGACCTGCATGTACCCCCAACCCGTT
GTCCATGTTGTCCTGCATGTTATGTATGCCATGCATGTATGTTACGTATG
TTGTGTAGATCTGGTACGACCTGGCGGAGTACGAGTTCTCCTTGGGTGAG
GCCGACCGCGCCGCCGCCGTCTACAGGAAGGCCGTCGAGGTACGTATTTG
TTGTACTGGAAGACGAATTGAGATTGGAACTGGGAGGGGTGACTTTGTGG
GTTTTGTCGACGCAAGCATGTGTGACCCCGGTTGGTGCATCTATTATTTC
AATGGTTAGTTTGTTGTCCAGAGAACATACACCGCGATGTGTAGATACGA
GCACCCAATACGCCGAATCGTGTTTGTGCACGAGAGGAGAAGTCAGACTT
GTATCTAGGCCGGAATAGATGGGATGATGGGATGGGATGGAAAAACAAAA
GTTGTGTTGTGGTGTGAGGTATGTACATCGTCGTTAGGTACATCGGATAC
TACTGCGTGGGCAGAAGTGGACAGGTACTAGAGTAGTCGATCAATCGATC
GGTGGATTGGGGGTAGTCGAGAGTGTTATAACGGGTTAGGGTTGGTGATT
TTTGAATGAAATGTAGACCAGGCCGCCCCTATCGATGCCTTTTGTACATA
CAGCAGAAATATGACGTTGGAAAGCAAATAGCCGCAGTTTGTAGAAGTGG
ATACTCAGCACAATTGGGTCGAGGGCATGCCATGCAAGCGGGGTGTCGAC
GACCACCAGCGTCTCCCCAAAAATAAAGATGCCGGTTCCAGGTATGTATG
TAGCTATACGTAATAACGAAGGTTCGCATGGCATGTCCTTGTTGCTCGTG
ATTGGAATACAACCAGTTATCGAGCGGAGCCGGGATCGACCCCACCCCAT
GGACAATGTCATACAGTATAAAGGGTAGCTTGGAAGCTGACGGAAGTTAC
GCCGCGTTTCGATGTGAGGGACAGGCCTCAAAAGCCGGAAGGCTTCCTTT
CTCGCCGGGGACGCATTTTTTCGAGCTGCTGGCAAGCATACAGAACCAAG
TCCCACCATAGCGAGCTGGCCTCTCCCTCGGAATAAAGAGCTAGTATAGG
CTACACCTGTCACAATAAACCCCTGGTGCGCAGGAGGGGTTTAATCTCGT
CCAAAATACAAGTCCAGAACGCTTGTTGCTCAACCAGCGGCTGGTTTGTC
AGAAAAAAAACTACACCCCTCCATACCGCCAGTGCTTGCTCGTCAGAGAG
CTGCTACAGGTCTATGCTTGCCCAGCCCATACGAGACCTCTCTGCATGTG
ACTGGCTGTGTCTGGCGACAATCCGCTTTCCACGTCATGAGGCGTAGGCC
GAGTATTGCTTTATCTCCGGCCTCAACAATTTCCAGCGGTTCTTTGGTGC
GTAGAGCAGCATGATACACTTGGAGGTAACAACATGTTTTTTTCAGGAAA
GTGGCAACGGCGGTGCTTTCGCCTCCAGCAAGCCCAAAACCCCCGCAACC
AGCACTTTTTAAACCCGTAGATCCAGCAATACTCGGCCTACACTTCATGA
AACCGAAAGCGGATGATTGCCAGACATATGCAGAGAGGTTTGGTATGGGC
TAACAGGACCTGTAGCAACTCTGTGACGAGCAAGCGCCGGCGGTATGAAG
GTTTTATGTTTTTTTCTAAGGAACCAGCCCCTGGTTGAGCAACACGCGTT
CTGGGCTTGTAGCACGAGATTGAACCCCTCCTTCGTACCCAAGGCCCTTA
TTTTCTTATTTTGATAGTTCAAGCCTCGCCCGTCTCGTTCGTGCCGAGTG
TGAGGCCGGTTCGCTCTATGACGGACTTGGTTCTGTGTGCTGGGTAGTAG
ATCAGAAAAAACAACCCCACCCGATAGAGAAAGCCTTCCGGCTTTTGAGA
CCTGTCCCTCACACAAAAATTACTAAAAAATGAGTGCGGCGGAATTTCTG
TCAGCTTCAAAGCTACGCTTGATATGTCATTGTCTATAGACCCCACCCGT
GTTTTTCTCATCACGTCGCCGTTTTTGTTTTTCTTCATCAGTCCACCCCC
CCCCCATTCATTATTCTTGTCACGACACCCCTTTCGCGTGACGGCAAGGT
TATTCCCGGAAGTGACCTTCTGCGCGTGGCACAAGCAGACCTAGAGGAGA
GGAGAGGGCGCGTGGACGAGGCAAACACCATCTGGAAGGCGTTTATTGCA
GACCGCCGCACCAGCACTACCGCCAACGTCATGTATCTCAGGTACCGTCA
AACGCTTTGAGTTCCTCCCAGGAAGGGTGTCTTTTTTGTTGTTGAAATAC
AATACAGGTATCCCCGGTGTAACTCAAGAAAGGGGAGGTGATTTGTTTTG
TGTTGAATACAGGTACCCCAATACAGGTACCCCGGGGGGAGCAGAAATGT
CTGGCCATATTTTACACAACCATTTCACCCAAAACCGCGATGGATCTAGC
CAGCATTTATGTACGAGCAACAGTCGAAGAAGGAGAGAGATGAGGAGGAG
GAGGAGGAGGAGGGGGAGGAGCATGAAGTGTTGGGCCCCAATGTATGCCT
GTTTTGATGCGCGCCGTGATGCCAAAACATGTGCAAAAAACGACGAAGAA
ATTATTGGGAAACAAGTACCTTGGGGGGGGGGGGGGGGGAGATTTGTTTT
TTTTCCCCGTTAAAACACACAATACCCCGGGGGTACCCAAACATGAATTT
TAGACGAAAAGGTGATAGGGGCAGGGGAACTCACTGTGAGGGGGGGGGAC
TCAAAGCTTGTTACGGCATGTAGAATCATGGAGTGTTCACTCACTCAGAG
TATGTATGCATGCCATCCCTACTCTCTTTTGCATCCACGGGGGCGCAACT
TCCTCCTGTTGTCTCATTCCCACTTATTGCCACACACACGCATTCAAAAC
TGAACACTGCCCCATGGCAACAGCAGTGCAACTAGGTATTATGGCTGTTG
CAAGTATCTAGGTATTGTTTTGCGAGCTTGAAACGAAAGAGAAGATTGGC
ATACGCGGCCCCAAAACCATAGGATAGGATAGGATAGGATAGGATAGGAT
AGGAGATGTGATCGGGTGTTTCGCAGGCCCGACACCACGCTGTTTCCCCT
TTGGTCCTACCGTGTGCTTCCCTTCCCTCGCCTTGAGATTGATCACCCCC
CCCGTCCCCCGCTCTCTTCTTTCTCCCACACGCTATCTAGGCTTGAACTC
GCTAGGCGTTTTTTTTTCTTCGTTTTACCTACACTTTTTTTCTACACTAA
AACCAGTATAATAGGACTTGTGTTCCTCCGCAATTTCGCAAATCGCCTAG
CGAGTTCAAGCCTAACACCATCACGCAAAACACGCGACTGATCCGCTCAG
GTTTGTGCGGCGCAACATGGGCAAGGAGGCGGCCCGCCGCGCGTTCGGCG
ACACCCGGAAGCTCCGTCGGTCGGAGGAGCTAACGCACACCCACCGCCTG
TACCTGGCGCACGCCTCCATAGAGCTGCACGTGAACGGGGAGCCGGAGGT
TGCCCGGAGGGTGTTCGAGCACGGGCTGTCGCAGCACGAGGGCTTCGTCC
GGGAGCCGGAGTACGTGCTCGAGTACATAGACTTCTTGGTGCAGGTGTGT
GTGTGTGTTTGTGCGTATGTATGTTGTTGTTTGTTGTTGTTGTTGTTGAT
GTTTTTGGTGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGCTGTTGTTGTTGACAGTCCCGTGACAGTCCCGT
AACAGTCCCGTTGTTGTTGTTGTTGTTGTTGACAGTCCCGTGACAGTCCC
GTAACAGTCCCGTTGTTGCTGTTGTTGTTGTTGTTATTGTTTCTTGACGT
TGACAACCGTTCCGATCTCTCCACCCAGTAAATTACGTCCCTATTATGGG
CGTACTATTCCAACACTTGATGCGGTCAATTCCCGTGGTAACAGGCTAGT
ATAACTTACACCTAAAAAAAGATACACGAAAATACAATGGACCCGAAGGG
TCAGCAAAGCGATAAAAAATCAAAGACAAACATGTGTATGTCGAAAAAGA
GTGTATGTAGTTTTGGGATGGGGATATGGGACAGGGGCCCGAACCGACCG
TGCTTGCGGGGTAGGGCAATCGTGTGTTTTCGTGGATCTGAGGAGTGTCA
ACTTGAGTGCGGACAATCGGAATCGTGACTGCTGCTTTATCTTCTTGCAG
CCCTCCGTGGCATTTCGGTGAGAGGTGCTGTGTGGGTGGCGCTACTTCTC
ACGCGGTTTTCGCAACAGCTCGCTATTGTATTGCATCTCGATATCGGGTT
GAAACTCGGAGAGAAGCGGCCAAATAGAGACACCAGCAGTGGTGGGACAT
TGATTGTGGGAGGGGCCCCGTGCGGTTCACCTAGGGCTACATATTGAACA
GTTTTTATGCCTCCTCCACCTCACCTCTGTTTTTGATTTCTGCTGCTCAT
TCCTCATTCCACTATTTCCACTGTTACACTACTACTGCTGTACGCTGCAA
CTGCATGGCATGATGCCATATTGTCATATTTAGCATGATGCGAATTCGGT
ATCATGGGATGCGTATGACACGGCATGATGCTGGTGTGATGTGTGATGCA
TATGTGTGGCATGACCATGACATGATGTGACAGCGCAACGACGAAGATAA
CCTTCGAGTGCTGTTCGAGAGGGTGCTGCACCCATCCGCCATGCCCGCTG
AGAGAGCGAGGCTCGTGTGGGAGCGGTTCGTGCAGCTGGAGCTTTGCCTC
TCGCGTACCGGCGGGAGCTTGATGAGGGCCCAAAACGTCGAGAATCGCAT
GAACCAGGTGAATTATGTATATAGCACAAGAAACAACTCGTGTGTGGTAG
ATTTTAGCGTTCGGCGAGTTGAAATAAACAACATCGTAGATATGCAAGGG
TGTGTTGTGCTTGTACTGCTGTTGATGTTTTTTTTTTGGTCCTGTCGCAA
TTCCTAGAAGAAGTCCATCCCCTCACCTCCATCTTTCATTTTGACTGACC
GTGTACGCATGTATGTTGGTTGGTACCTTGTTGGTGTACGGTCCGTGCAC
AACGGTTTGTCCAAACATTCTCAGGCATGGGTAAATTAGCAACTTTTCTT
TGCACACAGGGGGGTTGTTCCGAAATACTCTGTATGAAGGTACCGGCAAC
CGGCAACCGCCCTGTCTCCAGGCGCATTTCGTGACGGAGTTTTTTTTTCC
TCCACTTTTTATGAGAGAAAACCCGGGAAAACTTGTACAGTACCATAGTC
TTTTCCCCGAGGTGTGGTGTAACCGATTACAAAAAACTTGACGGATTTGG
ACCTCGGAATTTGCCAGAATGGGATTTTGTTACATATTGTAGAAATAATC
AAAGTTGACGAGGATATTTATCGCCCAAGAACTTGATCTAGAGGGTCGAC
TTGTAATCTTTTATTTGAGATAACCAACCCTACGATTTCAAAAAATAGAC
TGCTGCAAACGATCCCTCTCATCAGTCCCCAGAACGGGATGTTTTTTTTT
TCCCTGGGGAAAGCCGTGTTTCTCGAGATTTCCAGATTTTGTTTAGCAGT
CTTTTTTCAGTATAGTTTGGAGGTAACGCATGTTGTCTACGGGGCCCCGT
CGTGTTGAAGGAGGTCCGTGACGGGCAAGGGGATTTCGTGGGGGCATATT
ATATCGAAAACCGCTCAATATCCCGAAAATAAATGAATCTTCAAGATATC
GACGTATCTCGACGTGGTGGTCACGAATATCATTGTTTCACGTTCCTAAT
ATTTTTCTTTCTAACAAAAGTTATCCCAAAAACATCATGTGTTGTGCACG
GACCACATGTATGTATGTATGTATATATGTATGTATGCTGATGGCATCCT
TGTCCGCACCCGGTGTGTCTTGTGCGTTACATTGTGTTGTCTTGTCTCCT
CCGAGTTAGGTGTACAACGACAGCTCCGGCCCTTCCGGTCTGCTGGCTCT
GTGGAAGCGGTGCTCAGTGTCAGGTTGCGGGATGCATCCGGAGGGAGACG
TGGACTCCGCTTTCAGCGACAGGTATTTGCGTCTTCTGTACATGCATAGT
TGCTTTTTTGGTCAATGCCGTGCCGATGTCGTTAAAATAATTGTATCTGT
TTAATTTTGATTGTTTTGGGAACCAAGTCTTGTTGTTTTTCTCAGCTTCC
CTCTTCTGCCGCGTGCTGACATCATTTTTTTTCTTTTTTCTTTCTTCACA
TTTATTTTCAGTGCTCGATGACATCCTCGCCATGAGAGCATCTTGCCAGA
GTACTTAAGAACCATGGTCCCACAGAAGGGTGTCTTTCCCCGAGGCCCCC
ACTACCCCCTTCTGCGGTGCTTGCCTAAGGTTTTTGTCGCGAGAAGGGTT
CAGCCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGTTTGTGTAGACAC
GCCAAGCGCTACAATATCCACCGACAGGGACGAAAGCGAGAGAAAAAACT
CACTTTTTGCGAGAAAAAGCCGCTTCCGCCGGGATTCGAACCCGTGCCAT
TTAAAAGGTGTACAGGATGCATTACCGGGGCGATGAGGTCATTTATCAGC
CCGCCAGGGTGTCCCAGCCCGAGAGGCCCAACCCCCCCATCCTCATCCCC
GATGTCACTAAATTCATAAAATCGTCAAAATGTCGAATGTATGAACATCC
CATGTTGATCTGCAGAATGTTTGTCGAGAGGCATGAAACGTGGAAACAAA
GAGACCAGGGTCAACAGCGGGGCGACAAGGACGCCAAAGATGCAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1249:11295..26990+

>mRNA_L-elsbetiae_contig1249.2025.1 ID=mRNA_L-elsbetiae_contig1249.2025.1|Name=mRNA_L-elsbetiae_contig1249.2025.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4902bp|location=Sequence derived from alignment at L-elsbetiae_contig1249:11295..26990+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTACCACCTGTGGGAGAGTGGTTGGGACACTGTTTCACAGGGAAGCAT
GCCTGGAGAGAGCAACAGTAAGCAAAAGGATGAACCGGCGAAAAAAGCGA
AGAAATCCGGTGCTTCTACCAAGAAAGAGAAGCACGATGCCAAGGGGAAG
GGAGCGGCTACAGCCTCCAAAGCAAAGTTGACAACGGCAGGCGCGGCCAC
GAAGGCTAAGGGCATCAAAAAGAGCAAGAGCTCCAAGGCCAGGAAAACTG
CTGCAGCGAAAGAATCGGCGGTGGTCGATGGAGATGACAATGACGAGACC
AAGGAGACAAAGACATCCAAGTCCAAGTCCAAGTCCAAGGCGGTGAAGGT
AGAGGAGGGGAAGGCGAAGGGAGGGAAGGACCAGCAACCAGAGGAGCCAG
AGCCTGCGGATGGTGACGATAATGACGGTGATGGTGATGGTGATGGTGAT
GGTGATGAGCGGCAGGAACAGGAGCTCGAATCGATGGAAGAGGACCAAGA
GGCTGAGGAAGATGCTGCTGAGCTCTACCACCTGTGGGAGAGTGGTTGGG
ACACTGTTTCACAGGGAAGCATGCCTGGAGAGAGCAACAGTAAGCAAAAG
GATGAACCGGCGAAAAAAGCGAAGAAATCCGGTGCTTCTACCAAGAAAGA
GAAGCACGATGCCAAGGGGAAGGGAGCGGCTACAGCCTCCAAAGCAAAGT
TGACAACGGCAGGCGCGGCCACGAAGGCTAAGGGCATCAAAAAGAGCAAG
AGCTCCAAGGCCAGGAAAACTGCTGCAGCGAAAGAATCGGCGGTGGTCGA
TGGAGATGACAATGACGAGACCAAGGAGACAAAGACATCCAAGTCCAAGT
CCAAGTCCAAGGCGGTGAAGGTAGAGGAGGGGAAGGCGAAGGGAGGGAAG
GACCAGCAACCAGAGGAGCCAGAGCCTGCGGATGGTGACGATAATGACGG
TGATGGTGATGGTGATGGTGATGGTGATGAGCGGCAGGAACAGGAGCTCG
AATCGATGGAAGAGGACCAAGAGGCTGAGGAAGATGCTGCTGAGGGCGAT
GGTGATGGTGAAGGTGATGGTGAAGGTGACGGCGACGGCGAGGCCGAGAG
CGCCGCCCCTGTCCCATCGATGCATGTACCCACGATATCCACGATACCGA
CCCACCGGAGGCTTCGGCGTCAAGTGTCTGCGGCCGGGGAATTCGACTAC
GGCGCCATCGGCAACCGCGCCTCAGACAGGGCGATGGTGATGGTGAAGGT
GATGGTGAAGGTGACGGCGACGGCGAGGCCGAGAGCGCCGCCCCTGTCCC
ATCGATGCATGTACCCACGATATCCACGATACCGACCCACCGGAGGCTTC
GGCGTCAAGTGTCTGCGGCCGGGGAATTCGACTACGGCGCCATCGGCAAC
CGCGCCTCAGACAGATTTAAGGCGTACGTGAGGCGCATCGAGCTGGACCA
GTGGGACACGGACGCCTGGACGGGGTTGGTTAAGGAGGCGCAGAACAACC
GGGGGGGTGGTATGAGTCTCAAGGACATTTTAAGATTTAAGGCGTACGTG
AGGCGCATCGAGCTGGACCAGTGGGACACGGACGCCTGGACGGGGTTGGT
TAAGGAGGCGCAGAACAACCGGGGGGGTGGTATGAGTCTCAAGGACATTT
TAAGGAAAATTCTGAAGCAGTTTCCGACGTCCGGGAGGTTCCACCGCATG
CTGGTGCAGGCGGAGATGGAGAGCGGTGACTGGCAGGCGGCGGACAAGGA
AAATTCTGAAGCAGTTTCCGACGTCCGGGAGGTTCCACCGCATGCTGGTG
CAGGCGGAGATGGAGAGCGGTGACTGGCAGGCGGCGGACAAGGTGCTGCA
AGAAGGATTGGAGAACTGTGTGAGCTTGGAGCTGTGGCTCTTGTACCTCG
AGAGAGTGCGGCGGTCGGCTGTTGCCGGCGGTGGCCGAACGGAACAGGAA
GCGAGGGACGACACCATCAAGGCTTTCGAGCTCGCCCTACTGCACGTGGG
GTGCTGCAAGAAGGATTGGAGAACTGTGTGAGCTTGGAGCTGTGGCTCTT
GTACCTCGAGAGAGTGCGGCGGTCGGCTGTTGCCGGCGGTGGCCGAACGG
AACAGGAAGCGAGGGACGACACCATCAAGGCTTTCGAGCTCGCCCTACTG
CACGTGGGGTGCAACCCCGCGTCAACGCCCCTCTGGCAGAGGTACCTGGA
TTACATCAAGAGCTGGGAAGAGCGGAGCCCCCTCGACAAGGGCAACAAGA
TGACTGCCATCAGGAAGGTGCAACCCCGCGTCAACGCCCCTCTGGCAGAG
GTACCTGGATTACATCAAGAGCTGGGAAGAGCGGAGCCCCCTCGACAAGG
GCAACAAGATGACTGCCATCAGGAAGGTGTACCGGCGAGTCGTGGCTCTG
CCCCTGGACGGGCTGGAGGGGCTGTGGAGAGAGTGCGAGGAGTTCGAGAT
GGCCGGGAATGAGGTGCTGTGGAAGACCAAGTTCAGCCTGGATTATTTAC
CAAAGTGTACCGGCGAGTCGTGGCTCTGCCCCTGGACGGGCTGGAGGGGC
TGTGGAGAGAGTGCGAGGAGTTCGAGATGGCCGGGAATGAGGTGCTGTGG
AAGACCAAGTTCAGCCTGGATTATTTACCAAAGTACATGGCAGCTAAGGC
CGTTTACAAGGAGAGGAAGCCGATCTGGGACGGCATCGACCCAAACCTTC
TAGCCAGGACTCCAAGAGGGATCGATGGCGACGGCGGCGGCGGCGGTAGC
GGCGGTAGGGACGGCAGGGAAAACAAGAAGAGAAAAGATGCGCAGGCTGG
GCAGTACAAGCTGTGGAAGAGGAGGCTGGCCTACGAGAGGTCCAACCCGG
AGGTACATGGCAGCTAAGGCCGTTTACAAGGAGAGGAAGCCGATCTGGGA
CGGCATCGACCCAAACCTTCTAGCCAGGACTCCAAGAGGGATCGATGGCG
ACGGCGGCGGCGGCGGTAGCGGCGGTAGGGACGGCAGGGAAAACAAGAAG
AGAAAAGATGCGCAGGCTGGGCAGTACAAGCTGTGGAAGAGGAGGCTGGC
CTACGAGAGGTCCAACCCGGAGCTGATAGATGAGGACGGGCTACGGATGC
GAGTCCGGCACAGCTACGCCCAATGCCTCACCCACTTCCGGCATTACTGC
GAGCTGATAGATGAGGACGGGCTACGGATGCGAGTCCGGCACAGCTACGC
CCAATGCCTCACCCACTTCCGGCATTACTGCGAGATCTGGTACGACCTGG
CGGAGTACGAGTTCTCCTTGGGTGAGGCCGACCGCGCCGCCGCCGTCTAC
AGGAAGGCCGTCGAGATCTGGTACGACCTGGCGGAGTACGAGTTCTCCTT
GGGTGAGGCCGACCGCGCCGCCGCCGTCTACAGGAAGGCCGTCGAGGTTA
TTCCCGGAAGTGACCTTCTGCGCGTGGCACAAGCAGACCTAGAGGAGAGG
AGAGGGCGCGTGGACGAGGCAAACACCATCTGGAAGGCGTTTATTGCAGA
CCGCCGCACCAGCACTACCGCCAACGTCATGTATCTCAGGTTATTCCCGG
AAGTGACCTTCTGCGCGTGGCACAAGCAGACCTAGAGGAGAGGAGAGGGC
GCGTGGACGAGGCAAACACCATCTGGAAGGCGTTTATTGCAGACCGCCGC
ACCAGCACTACCGCCAACGTCATGTATCTCAGGTTTGTGCGGCGCAACAT
GGGCAAGGAGGCGGCCCGCCGCGCGTTCGGCGACACCCGGAAGCTCCGTC
GGTCGGAGGAGCTAACGCACACCCACCGCCTGTACCTGGCGCACGCCTCC
ATAGAGCTGCACGTGAACGGGGAGCCGGAGGTTGCCCGGAGGGTGTTCGA
GCACGGGCTGTCGCAGCACGAGGGCTTCGTCCGGGAGCCGGAGTACGTGC
TCGAGTACATAGACTTCTTGGTGCAGGTTTGTGCGGCGCAACATGGGCAA
GGAGGCGGCCCGCCGCGCGTTCGGCGACACCCGGAAGCTCCGTCGGTCGG
AGGAGCTAACGCACACCCACCGCCTGTACCTGGCGCACGCCTCCATAGAG
CTGCACGTGAACGGGGAGCCGGAGGTTGCCCGGAGGGTGTTCGAGCACGG
GCTGTCGCAGCACGAGGGCTTCGTCCGGGAGCCGGAGTACGTGCTCGAGT
ACATAGACTTCTTGGTGCAGCGCAACGACGAAGATAACCTTCGAGTGCTG
TTCGAGAGGGTGCTGCACCCATCCGCCATGCCCGCTGAGAGAGCGAGGCT
CGTGTGGGAGCGGTTCGTGCAGCTGGAGCTTTGCCTCTCGCGTACCGGCG
GGAGCTTGATGAGGGCCCAAAACGTCGAGAATCGCATGAACCAGCGCAAC
GACGAAGATAACCTTCGAGTGCTGTTCGAGAGGGTGCTGCACCCATCCGC
CATGCCCGCTGAGAGAGCGAGGCTCGTGTGGGAGCGGTTCGTGCAGCTGG
AGCTTTGCCTCTCGCGTACCGGCGGGAGCTTGATGAGGGCCCAAAACGTC
GAGAATCGCATGAACCAGGTGTACAACGACAGCTCCGGCCCTTCCGGTCT
GCTGGCTCTGTGGAAGCGGTGCTCAGTGTCAGGTTGCGGGATGCATCCGG
AGGGAGACGTGGACTCCGCTTTCAGCGACAGGTGTACAACGACAGCTCCG
GCCCTTCCGGTCTGCTGGCTCTGTGGAAGCGGTGCTCAGTGTCAGGTTGC
GGGATGCATCCGGAGGGAGACGTGGACTCCGCTTTCAGCGACAGAATGTT
TGTCGAGAGGCATGAAACGTGGAAACAAAGAGACCAGGGTCAACAGCGGG
GCGACAAGGACGCCAAAGATGCAAATGTTTGTCGAGAGGCATGAAACGTG
GAAACAAAGAGACCAGGGTCAACAGCGGGGCGACAAGGACGCCAAAGATG
CA
back to top