prot_L-elsbetiae_contig12481.2022.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12481.2022.1
Unique Nameprot_L-elsbetiae_contig12481.2022.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length144
Homology
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BLAST of mRNA_L-elsbetiae_contig12481.2022.1 vs. uniprot
Match: D7G3Y0_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y0_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 2.400e-5
Identity = 43/76 (56.58%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:   68 MVVSSLPASYAFGLVAGGTA-------GRTATAHIARC-SSRLLAPSTRSGGGGGRSALVAFDRSRR-TAFGIVPA 134
            MVVSSLPASYAFGLVA G+        GR   A++ARC SSRL A  T    G G+S+   FDRSRR +AFGI  A
Sbjct:    1 MVVSSLPASYAFGLVAAGSGAVAAAVGGRAGAANLARCCSSRLSALPTH---GVGQSSPGGFDRSRRLSAFGIFAA 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12481.2022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3Y0_ECTSI2.400e-556.58Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12481contigL-elsbetiae_contig12481:3742..4173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12481.2022.1mRNA_L-elsbetiae_contig12481.2022.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12481 3737..4173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12481.2022.1 ID=prot_L-elsbetiae_contig12481.2022.1|Name=mRNA_L-elsbetiae_contig12481.2022.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
MHSRTQCHRTHSSSSRPSQPHRADTTTLRAVGTAAAIPGRCAPTASLASR
SRGGGAGGGIFRLGAAAMVVSSLPASYAFGLVAGGTAGRTATAHIARCSS
RLLAPSTRSGGGGGRSALVAFDRSRRTAFGIVPAAATAGGELWG
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