prot_L-elsbetiae_contig12475.2016.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12475.2016.1
Unique Nameprot_L-elsbetiae_contig12475.2016.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
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BLAST of mRNA_L-elsbetiae_contig12475.2016.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 6.130e-8
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   46 MLSDYDTLTLGGGGRPLTPVGQESQTTYQVPVAA 79
            MLSD+DTLTLGG  RP+TPVG+ESQT YQ+PVAA
Sbjct: 1247 MLSDFDTLTLGGSERPVTPVGEESQTAYQIPVAA 1280
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BLAST of mRNA_L-elsbetiae_contig12475.2016.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 9.670e-7
Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0 
Query:   46 MLSDYDTLTLGGGGRPLTPVGQESQTTYQVPV 77
            MLSD+DTLTLGG  RP+TPVG+ESQTTYQ+P 
Sbjct: 1115 MLSDFDTLTLGGSERPVTPVGEESQTTYQLPA 1146
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12475.2016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEL9_9PHAE6.130e-879.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLR2_ECTSI9.670e-778.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12475contigL-elsbetiae_contig12475:3638..4111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12475.2016.1mRNA_L-elsbetiae_contig12475.2016.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12475 3611..4111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12475.2016.1 ID=prot_L-elsbetiae_contig12475.2016.1|Name=mRNA_L-elsbetiae_contig12475.2016.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MPPEKGRSAGGGGGSGGGGRRKDEAPAKRPSLNDGDDKGKGQGQVMLSDY
DTLTLGGGGRPLTPVGQESQTTYQVPVAAGGGKNAPASLRRERTDPPPLP
PRRDNEGSPTYAGAVDGEDLQQQQQQQEPPVSGGAVAAGGGVAPPPLPPR
LSGRDVSG
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