prot_L-elsbetiae_contig12475.2015.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12475.2015.1
Unique Nameprot_L-elsbetiae_contig12475.2015.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig12475.2015.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 4.980e-13
Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:    4 KDLRLEVKED-----------FSTWQGPNSRAPSSGQARDGSFGVRRRRRQSDGESKG----WTSDSTSADVGXXXXXXXXXXVTSFPSHPSPLSG 84
            K+LRLEVK D           + +WQGP+SRAPSSGQA+DG+FGVRR+  QS+GE       W +DS+ A     XXXXXXXX  SFPSHPSPL+G
Sbjct:  911 KNLRLEVKGDGDGDDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEGEGGRNLGPWATDSSGAPX---XXXXXXXXQASFPSHPSPLAG 1003
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BLAST of mRNA_L-elsbetiae_contig12475.2015.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.250e-12
Identity = 44/95 (46.32%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:    5 DLRLEVKE-----------DFSTWQGPNSRAPSSGQARDGSFGVRRRRRQSDGESK----GWTSDSTSADVGXXXXXXXXXXVTSFPSHPSPLSG 84
            +LRLEVK            ++ +WQGP+SRAPSSGQA+DG+FGVRR+  QS+ E       W +DS+ A  G            SFPSHPSPL+G
Sbjct: 1047 NLRLEVKGHGDGDDGSEWGNYYSWQGPDSRAPSSGQAKDGTFGVRRQSNQSEEEGGKHLGAWATDSSGAPTGGGGAGGQ----ASFPSHPSPLAG 1137
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12475.2015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLR2_ECTSI4.980e-1356.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL9_9PHAE8.250e-1246.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12475contigL-elsbetiae_contig12475:2486..3514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12475.2015.1mRNA_L-elsbetiae_contig12475.2015.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12475 2486..3515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12475.2015.1 ID=prot_L-elsbetiae_contig12475.2015.1|Name=mRNA_L-elsbetiae_contig12475.2015.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
GSTKDLRLEVKEDFSTWQGPNSRAPSSGQARDGSFGVRRRRRQSDGESKG
WTSDSTSADVGGGGGGGGGGGVTSFPSHPSPLSGGEGG
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