prot_L-elsbetiae_contig12466.2008.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12466.2008.1
Unique Nameprot_L-elsbetiae_contig12466.2008.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 3.800e-113
Identity = 170/188 (90.43%), Postives = 180/188 (95.74%), Query Frame = 0
Query:   50 ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPGRRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCA+GADRTGFKAIAYEFFSQAFILYEDEL+DSKAQVRALVSMAGTLLSCEGFD  DYD+LATKTAQYAAKLLKKPDQCRMVTLCSHLFW+PDE  PGRRDARRVLECLQRSLKIADVC+AGG+NAQLFIEILNHY++FFEADNPE+    +S
Sbjct:  672 ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCAIGADRTGFKAIAYEFFSQAFILYEDELSDSKAQVRALVSMAGTLLSCEGFDPVDYDALATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEAAPGRRDARRVLECLQRSLKIADVCIAGGMNAQLFIEILNHYIFFFEADNPEIAGRYIS 859          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2MQE7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQE7_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.410e-78
Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0
Query:   54 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWA-PDEDVPGRRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            +FS+RK++QFLHEIVTAMA  +P   L LFLQCA  AD    KAIAYEF SQA ILYEDELTDSK Q+RAL+SM GTLL+C  FD  DYD+L TKT QYAAKLLKKPDQCRMVTLCSHLFW    ED     D RRVLECLQRSLKIADVC+A  ++  LF+EILN Y+Y+FE DN  +    +S
Sbjct:   82 KFSTRKIFQFLHEIVTAMAHSYPEHCLKLFLQCAQAADNCSLKAIAYEFVSQASILYEDELTDSKKQLRALISMVGTLLTCRNFDDQDYDTLITKTTQYAAKLLKKPDQCRMVTLCSHLFWVGKSEDETHYHDDRRVLECLQRSLKIADVCMASSMHVHLFVEILNRYLYYFENDNQLITEKYIS 266          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2V1M5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M5_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.060e-73
Identity = 118/193 (61.14%), Postives = 142/193 (73.58%), Query Frame = 0
Query:   52 PRQFSSRKVYQFLHEIVTAMAPL-HPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDED-VPGR-----------RDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEV 231
            P +FS+RKV+QFLHE VTA+A   H  ++L LFLQCA  AD+T FKAIAYEF SQAF++YEDEL DS+AQVRAL SM GTLL+C  F+  DYD L TKT QYAAKLLKKPDQ RM+T+C+HLFW    D V G            +D RRVLECLQRSLKIADVC+A   + QLF+++LN Y++FF    PE+
Sbjct:   29 PPRFSTRKVFQFLHEAVTAIAGAQHAPLALQLFLQCAQAADKTNFKAIAYEFISQAFVIYEDELADSRAQVRALGSMVGTLLNCHNFEEDDYDPLITKTTQYAAKLLKKPDQARMITMCTHLFWVTKPDQVEGEDSAASGGQYYYQDGRRVLECLQRSLKIADVCMASSAHVQLFVQLLNQYLHFFHLGCPEI 221          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A835Z7F2_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F2_9STRA)

HSP 1 Score: 236 bits (601), Expect = 6.210e-68
Identity = 116/200 (58.00%), Postives = 147/200 (73.50%), Query Frame = 0
Query:   49 AARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQ--------VRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVSK 238
            A  P ++ SRK++QF+HE VTAMAP+ P  SL LFLQCA+ ADR GF AIAYEF SQA ILYEDELT+++AQ        V A+ ++ G L SC GF+ AD+++LA KTAQY  +LL+KPDQ R V +CSHLFWA ++D     +RDARRVLECLQR+LKIAD C+AGG N  LF+E+LN YVY+FE  N +V    +S+
Sbjct:  843 AVSPLKYGSRKMFQFVHETVTAMAPMFPAASLRLFLQCAIAADRAGFPAIAYEFVSQACILYEDELTEARAQASHTLNLAVSAVTALVGALTSCSGFNAADWEALAAKTAQYGVRLLRKPDQSRAVAMCSHLFWAAEDDAGAHFKRDARRVLECLQRALKIADGCMAGGTNVVLFVEVLNLYVYYFEHGNADVAEKYISR 1042          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: F0YJY6_AURAN (SWIM-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY6_AURAN)

HSP 1 Score: 218 bits (554), Expect = 3.280e-62
Identity = 121/202 (59.90%), Postives = 133/202 (65.84%), Query Frame = 0
Query:   54 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFW------------------------AP-DEDVPGRRDARRVLECLQRSLKIADVCLAGGVNA-QLFIEILNHYVYFFEADNP 229
            Q+SSRKV+QF+HEIVTAMA   P +SL LFLQCA  AD  G  AIAYEF SQAFILYEDEL DSKAQ++AL  M GTLL   GFD  DYD+LATKT QYAAKL KKPDQCRMV  CSHLFW                        AP DE      DARRVLECLQ+SLKIAD C+    +   LF+EIL+HYV  FE   P
Sbjct:  586 QYSSRKVFQFVHEIVTAMAGSFPALSLHLFLQCAQEADAAGLGAIAYEFVSQAFILYEDELPDSKAQLQALHLMVGTLLQASGFDAPDYDALATKTTQYAAKLFKKPDQCRMVATCSHLFWSGPPPAAPPKPEGDLLDDDGDDATAPADEPAAAPGDARRVLECLQKSLKIADACMTSSSSPINLFVEILDHYVAHFEKKCP 787          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2EWB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWB7_TRICV)

HSP 1 Score: 202 bits (513), Expect = 8.030e-61
Identity = 104/195 (53.33%), Postives = 137/195 (70.26%), Query Frame = 0
Query:   53 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQ-------CALGADRTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEV 231
            +  + RKVY FL + V A++P +P + L L+LQ       CAL A R+G      F A+AYE  +QAF+LYED+++DSKAQ R +V+M GTLL+C  F+  DY++L TKTAQYAAKLLKK DQC+MVTLCSHLF+   E  P   R   +RVLECLQR+LKIAD C +A   N QLF++IL+HYV+++E  NP +
Sbjct:   42 KDINCRKVYVFLQQTVAALSPGNPELGLKLYLQIANSADRCALAASRSGSKEGPEFSAVAYEIMAQAFLLYEDDVSDSKAQQRTIVAMVGTLLACRTFERDDYEALITKTAQYAAKLLKKTDQCKMVTLCSHLFFTGAEGDPSAVRSHPQRVLECLQRALKIADACSMASPANVQLFVDILDHYVFYYERKNPVI 236          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: W7TDU3_9STRA (Vacuolar protein sorting-associated protein 35 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU3_9STRA)

HSP 1 Score: 211 bits (538), Expect = 9.960e-60
Identity = 104/188 (55.32%), Postives = 136/188 (72.34%), Query Frame = 0
Query:   54 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRT---GFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPGR-RDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            QF  RK++Q +HE++T++AP    ++L LFL+ A  ADR     FK I+YEF +QAF+LYEDE+TDSK+Q+RAL +M GTLL    FD +DYD+L+TK  QYAAKLLKKPDQCRMV L SHLF+    D PG   D +RV+ECLQRS+K AD+C+A   +  LF+E+LNHY+YF+E   P V    +S
Sbjct:  642 QFGCRKLFQAVHEMLTSLAPHFANLALKLFLEAAQAADRCEADAFKLISYEFVTQAFLLYEDEVTDSKSQIRALTAMIGTLLQARHFDESDYDALSTKVTQYAAKLLKKPDQCRMVALASHLFFVGRADEPGHYHDPKRVIECLQRSVKTADMCMASSQHMHLFVEVLNHYLYFYECGCPTVTEKYLS 829          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7R9WF66_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF66_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.380e-58
Identity = 103/196 (52.55%), Postives = 135/196 (68.88%), Query Frame = 0
Query:   58 RKVYQFLHEIVTAMAPLHPWVSLSLFL-------QCALGADRTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            RKVY F  + V A++  +P   L L+L       +CA+ A  +G      F ++AYE  +QAF+LYEDE++DSKAQ RA+ SM GTLL+C  F+  D+++L TKTAQYAAKLLKK DQC+MVTLCSHLF+  DED     R   +RVLECLQR+LKIAD C +A   N QLF++IL++YVY+FE +NP +    VS
Sbjct:   40 RKVYVFAQKTVAALSSGNPETGLKLYLNIANSADRCAMAARESGAAEWSEFSSVAYELMAQAFLLYEDEVSDSKAQQRAITSMVGTLLACRTFEREDFEALVTKTAQYAAKLLKKADQCKMVTLCSHLFFNVDEDEQSTLRSHPQRVLECLQRALKIADACSMASSANVQLFVDILDYYVYYFERNNPVITDKFVS 235          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: B8C964_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C964_THAPS)

HSP 1 Score: 198 bits (504), Expect = 1.340e-55
Identity = 100/200 (50.00%), Postives = 139/200 (69.50%), Query Frame = 0
Query:   53 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADR-------------TGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVP-GRRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            +  + RK+  FL + V  ++P +P ++  L+L+ A+  D              T F  IAY+F +QAF++YEDE+++SKAQ+RA+ SM G+LLSC  F+ ADY++L TKTAQYAAKLLKKPDQCRMV +CS LF+   +D P G R+ +RVLECLQR+LKIAD C +A   N QLF+EIL++YVY++E +NP +    VS
Sbjct:  525 KNVNCRKILVFLQKSVAILSPNNPELAFKLYLEIAVATDHLAHATLPNFQNASTEFSGIAYDFTTQAFLVYEDEISESKAQIRAITSMVGSLLSCRSFERADYEALITKTAQYAAKLLKKPDQCRMVCVCSRLFYVGGKDDPNGYRNPQRVLECLQRALKIADACSMASSSNIQLFVEILDYYVYYYEIENPAITDKFVS 724          
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2MWL0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MWL0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.650e-55
Identity = 101/209 (48.33%), Postives = 135/209 (64.59%), Query Frame = 0
Query:   53 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTG---------------------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDE--DVPGRRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 237
            ++ + RK++ F+ + +  ++   P  S  L L+ A+ ADR                       + AI+YEF +QAF LYEDE+++SKAQ R++  + GTLLSC+ F+  DY++L TKTAQYAAKLLKKPDQCRMVTLCSHLF+   +  D    R+ +RVLECLQR+LKIAD C +A   N QLF+EIL HYVY+FE DNP +    VS
Sbjct:  131 KKINCRKIFVFIQKTIAMLSLTDPEASFKLNLEAAIAADRCAVLAXXXXXXXXXXXXXXXXXDYSAISYEFIAQAFQLYEDEISESKAQQRSIELVVGTLLSCKTFEKDDYEALITKTAQYAAKLLKKPDQCRMVTLCSHLFFTGVDANDKQTYRNPQRVLECLQRALKIADACSMASSANVQLFVEILEHYVYYFEKDNPVISDKFVS 339          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMW9_9PHAE3.800e-11390.43Vacuolar protein sorting-associated protein 35 n=2... [more]
A0A7S2MQE7_9STRA1.410e-7867.03Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2V1M5_9STRA2.060e-7361.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z7F2_9STRA6.210e-6858.00Vacuolar protein sorting-associated protein 35 n=1... [more]
F0YJY6_AURAN3.280e-6259.90SWIM-type domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S2EWB7_TRICV8.030e-6153.33Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W7TDU3_9STRA9.960e-6055.32Vacuolar protein sorting-associated protein 35 n=4... [more]
A0A7R9WF66_9STRA2.380e-5852.55Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8C964_THAPS1.340e-5550.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2MWL0_9STRA2.650e-5548.33Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005378Vacuolar protein sorting-associated protein 35PFAMPF03635Vps35coord: 39..234
e-value: 1.3E-66
score: 225.6
IPR005378Vacuolar protein sorting-associated protein 35PANTHERPTHR11099VACUOLAR SORTING PROTEIN 35coord: 55..233
IPR042491Vacuolar protein sorting-associated protein 35, C-terminalGENE3D1.25.40.660coord: 25..238
e-value: 2.7E-72
score: 245.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12466contigL-elsbetiae_contig12466:2739..4532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12466.2008.1mRNA_L-elsbetiae_contig12466.2008.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12466 2739..4532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12466.2008.1 ID=prot_L-elsbetiae_contig12466.2008.1|Name=mRNA_L-elsbetiae_contig12466.2008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
DETPGTAAAEESEENGQAAATETTALEGAGQEDEEEEEEGFPPPPPPVAA
RPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAY
EFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTA
QYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPGRRDARRVLECLQRSLKIA
DVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005378Vps35
IPR042491Vps35_C