mRNA_L-elsbetiae_contig12466.2008.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE) HSP 1 Score: 354 bits (908), Expect = 3.800e-113 Identity = 170/188 (90.43%), Postives = 180/188 (95.74%), Query Frame = 1 Query: 148 ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPGRRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCA+GADRTGFKAIAYEFFSQAFILYEDEL+DSKAQVRALVSMAGTLLSCEGFD DYD+LATKTAQYAAKLLKKPDQCRMVTLCSHLFW+PDE PGRRDARRVLECLQRSLKIADVC+AGG+NAQLFIEILNHY++FFEADNPE+ +S Sbjct: 672 ARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCAIGADRTGFKAIAYEFFSQAFILYEDELSDSKAQVRALVSMAGTLLSCEGFDPVDYDALATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEAAPGRRDARRVLECLQRSLKIADVCIAGGMNAQLFIEILNHYIFFFEADNPEIAGRYIS 859
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2MQE7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQE7_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.410e-78 Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 1 Query: 160 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWA-PDEDVPGRRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 +FS+RK++QFLHEIVTAMA +P L LFLQCA AD KAIAYEF SQA ILYEDELTDSK Q+RAL+SM GTLL+C FD DYD+L TKT QYAAKLLKKPDQCRMVTLCSHLFW ED D RRVLECLQRSLKIADVC+A ++ LF+EILN Y+Y+FE DN + +S Sbjct: 82 KFSTRKIFQFLHEIVTAMAHSYPEHCLKLFLQCAQAADNCSLKAIAYEFVSQASILYEDELTDSKKQLRALISMVGTLLTCRNFDDQDYDTLITKTTQYAAKLLKKPDQCRMVTLCSHLFWVGKSEDETHYHDDRRVLECLQRSLKIADVCMASSMHVHLFVEILNRYLYYFENDNQLITEKYIS 266
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2V1M5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M5_9STRA) HSP 1 Score: 233 bits (595), Expect = 2.060e-73 Identity = 118/193 (61.14%), Postives = 142/193 (73.58%), Query Frame = 1 Query: 154 PRQFSSRKVYQFLHEIVTAMAPL-HPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDED-VPGR-----------RDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEV 693 P +FS+RKV+QFLHE VTA+A H ++L LFLQCA AD+T FKAIAYEF SQAF++YEDEL DS+AQVRAL SM GTLL+C F+ DYD L TKT QYAAKLLKKPDQ RM+T+C+HLFW D V G +D RRVLECLQRSLKIADVC+A + QLF+++LN Y++FF PE+ Sbjct: 29 PPRFSTRKVFQFLHEAVTAIAGAQHAPLALQLFLQCAQAADKTNFKAIAYEFISQAFVIYEDELADSRAQVRALGSMVGTLLNCHNFEEDDYDPLITKTTQYAAKLLKKPDQARMITMCTHLFWVTKPDQVEGEDSAASGGQYYYQDGRRVLECLQRSLKIADVCMASSAHVQLFVQLLNQYLHFFHLGCPEI 221
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A835Z7F2_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F2_9STRA) HSP 1 Score: 236 bits (601), Expect = 6.210e-68 Identity = 116/200 (58.00%), Postives = 147/200 (73.50%), Query Frame = 1 Query: 145 AARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQ--------VRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVSK 714 A P ++ SRK++QF+HE VTAMAP+ P SL LFLQCA+ ADR GF AIAYEF SQA ILYEDELT+++AQ V A+ ++ G L SC GF+ AD+++LA KTAQY +LL+KPDQ R V +CSHLFWA ++D +RDARRVLECLQR+LKIAD C+AGG N LF+E+LN YVY+FE N +V +S+ Sbjct: 843 AVSPLKYGSRKMFQFVHETVTAMAPMFPAASLRLFLQCAIAADRAGFPAIAYEFVSQACILYEDELTEARAQASHTLNLAVSAVTALVGALTSCSGFNAADWEALAAKTAQYGVRLLRKPDQSRAVAMCSHLFWAAEDDAGAHFKRDARRVLECLQRALKIADGCMAGGTNVVLFVEVLNLYVYYFEHGNADVAEKYISR 1042
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: F0YJY6_AURAN (SWIM-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY6_AURAN) HSP 1 Score: 218 bits (554), Expect = 3.280e-62 Identity = 121/202 (59.90%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 160 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFW------------------------AP-DEDVPGRRDARRVLECLQRSLKIADVCLAGGVNA-QLFIEILNHYVYFFEADNP 687 Q+SSRKV+QF+HEIVTAMA P +SL LFLQCA AD G AIAYEF SQAFILYEDEL DSKAQ++AL M GTLL GFD DYD+LATKT QYAAKL KKPDQCRMV CSHLFW AP DE DARRVLECLQ+SLKIAD C+ + LF+EIL+HYV FE P Sbjct: 586 QYSSRKVFQFVHEIVTAMAGSFPALSLHLFLQCAQEADAAGLGAIAYEFVSQAFILYEDELPDSKAQLQALHLMVGTLLQASGFDAPDYDALATKTTQYAAKLFKKPDQCRMVATCSHLFWSGPPPAAPPKPEGDLLDDDGDDATAPADEPAAAPGDARRVLECLQKSLKIADACMTSSSSPINLFVEILDHYVAHFEKKCP 787
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2EWB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWB7_TRICV) HSP 1 Score: 202 bits (513), Expect = 8.030e-61 Identity = 104/195 (53.33%), Postives = 137/195 (70.26%), Query Frame = 1 Query: 157 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQ-------CALGADRTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEV 693 + + RKVY FL + V A++P +P + L L+LQ CAL A R+G F A+AYE +QAF+LYED+++DSKAQ R +V+M GTLL+C F+ DY++L TKTAQYAAKLLKK DQC+MVTLCSHLF+ E P R +RVLECLQR+LKIAD C +A N QLF++IL+HYV+++E NP + Sbjct: 42 KDINCRKVYVFLQQTVAALSPGNPELGLKLYLQIANSADRCALAASRSGSKEGPEFSAVAYEIMAQAFLLYEDDVSDSKAQQRTIVAMVGTLLACRTFERDDYEALITKTAQYAAKLLKKTDQCKMVTLCSHLFFTGAEGDPSAVRSHPQRVLECLQRALKIADACSMASPANVQLFVDILDHYVFYYERKNPVI 236
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: W7TDU3_9STRA (Vacuolar protein sorting-associated protein 35 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDU3_9STRA) HSP 1 Score: 211 bits (538), Expect = 9.960e-60 Identity = 104/188 (55.32%), Postives = 136/188 (72.34%), Query Frame = 1 Query: 160 QFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRT---GFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPGR-RDARRVLECLQRSLKIADVCLAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 QF RK++Q +HE++T++AP ++L LFL+ A ADR FK I+YEF +QAF+LYEDE+TDSK+Q+RAL +M GTLL FD +DYD+L+TK QYAAKLLKKPDQCRMV L SHLF+ D PG D +RV+ECLQRS+K AD+C+A + LF+E+LNHY+YF+E P V +S Sbjct: 642 QFGCRKLFQAVHEMLTSLAPHFANLALKLFLEAAQAADRCEADAFKLISYEFVTQAFLLYEDEVTDSKSQIRALTAMIGTLLQARHFDESDYDALSTKVTQYAAKLLKKPDQCRMVALASHLFFVGRADEPGHYHDPKRVIECLQRSVKTADMCMASSQHMHLFVEVLNHYLYFYECGCPTVTEKYLS 829
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7R9WF66_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF66_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.380e-58 Identity = 103/196 (52.55%), Postives = 135/196 (68.88%), Query Frame = 1 Query: 172 RKVYQFLHEIVTAMAPLHPWVSLSLFL-------QCALGADRTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVPG--RRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 RKVY F + V A++ +P L L+L +CA+ A +G F ++AYE +QAF+LYEDE++DSKAQ RA+ SM GTLL+C F+ D+++L TKTAQYAAKLLKK DQC+MVTLCSHLF+ DED R +RVLECLQR+LKIAD C +A N QLF++IL++YVY+FE +NP + VS Sbjct: 40 RKVYVFAQKTVAALSSGNPETGLKLYLNIANSADRCAMAARESGAAEWSEFSSVAYELMAQAFLLYEDEVSDSKAQQRAITSMVGTLLACRTFEREDFEALVTKTAQYAAKLLKKADQCKMVTLCSHLFFNVDEDEQSTLRSHPQRVLECLQRALKIADACSMASSANVQLFVDILDYYVYYFERNNPVITDKFVS 235
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: B8C964_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C964_THAPS) HSP 1 Score: 198 bits (504), Expect = 1.340e-55 Identity = 100/200 (50.00%), Postives = 139/200 (69.50%), Query Frame = 1 Query: 157 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADR-------------TGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDEDVP-GRRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 + + RK+ FL + V ++P +P ++ L+L+ A+ D T F IAY+F +QAF++YEDE+++SKAQ+RA+ SM G+LLSC F+ ADY++L TKTAQYAAKLLKKPDQCRMV +CS LF+ +D P G R+ +RVLECLQR+LKIAD C +A N QLF+EIL++YVY++E +NP + VS Sbjct: 525 KNVNCRKILVFLQKSVAILSPNNPELAFKLYLEIAVATDHLAHATLPNFQNASTEFSGIAYDFTTQAFLVYEDEISESKAQIRAITSMVGSLLSCRSFERADYEALITKTAQYAAKLLKKPDQCRMVCVCSRLFYVGGKDDPNGYRNPQRVLECLQRALKIADACSMASSSNIQLFVEILDYYVYYYEIENPAITDKFVS 724
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Match: A0A7S2MWL0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MWL0_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.650e-55 Identity = 101/209 (48.33%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 157 RQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCALGADRTG---------------------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLSCEGFDHADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWAPDE--DVPGRRDARRVLECLQRSLKIADVC-LAGGVNAQLFIEILNHYVYFFEADNPEVQRLRVS 711 ++ + RK++ F+ + + ++ P S L L+ A+ ADR + AI+YEF +QAF LYEDE+++SKAQ R++ + GTLLSC+ F+ DY++L TKTAQYAAKLLKKPDQCRMVTLCSHLF+ + D R+ +RVLECLQR+LKIAD C +A N QLF+EIL HYVY+FE DNP + VS Sbjct: 131 KKINCRKIFVFIQKTIAMLSLTDPEASFKLNLEAAIAADRCAVLAXXXXXXXXXXXXXXXXXDYSAISYEFIAQAFQLYEDEISESKAQQRSIELVVGTLLSCKTFEKDDYEALITKTAQYAAKLLKKPDQCRMVTLCSHLFFTGVDANDKQTYRNPQRVLECLQRALKIADACSMASSANVQLFVEILEHYVYYFEKDNPVISDKFVS 339 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12466.2008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12466.2008.1 >prot_L-elsbetiae_contig12466.2008.1 ID=prot_L-elsbetiae_contig12466.2008.1|Name=mRNA_L-elsbetiae_contig12466.2008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp DETPGTAAAEESEENGQAAATETTALEGAGQEDEEEEEEGFPPPPPPVAAback to top mRNA from alignment at L-elsbetiae_contig12466:2739..4532+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12466.2008.1 ID=mRNA_L-elsbetiae_contig12466.2008.1|Name=mRNA_L-elsbetiae_contig12466.2008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig12466:2739..4532+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12466:2739..4532+ >mRNA_L-elsbetiae_contig12466.2008.1 ID=mRNA_L-elsbetiae_contig12466.2008.1|Name=mRNA_L-elsbetiae_contig12466.2008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig12466:2739..4532+ (Laminarionema elsbetiae ELsaHSoW15)back to top |