prot_L-elsbetiae_contig12442.1991.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12442.1991.1
Unique Nameprot_L-elsbetiae_contig12442.1991.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length284
Homology
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BLAST of mRNA_L-elsbetiae_contig12442.1991.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 8.860e-5
Identity = 94/186 (50.54%), Postives = 105/186 (56.45%), Query Frame = 0 
Query:   98 ENLRTTIGGSGSAARLXXXXXXXXXXXXXXXXXVEQATSGASGSRLPRKPSSGIPRKLSGTAAAAGASRLTAPASSAXXXXSRFADRSASIGSXXXXXXXXXXXXXXGRSISSAGAALRTVQVAADLDAGEDNNSGTGSAGSLPAGTPNKSSGEGAAAGAGGRRGFIPRPSPKTGRSLIPRRSGRA 283
            E+ R TIGGSG AAR  XXXXXXXXXX      VE+AT G S  RLPR   +GIPRK    +A AG + +    SS   XX            XXXXXXXXXXXXXX             VQ A + DA E++  G G A S+   T       G AA  GGRR FIPRPSPK GRS+IPRRSGRA
Sbjct: 3327 EDHRATIGGSGLAARRAXXXXXXXXXXRSAATAVEEATGGPS--RLPR---TGIPRK----SAVAGVAPVP---SSRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQGAVEFDAVEEDG-GAGPAESVVGSTR-----RGEAAVGGGRRTFIPRPSPKAGRSMIPRRSGRA 3494
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12442.1991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4T0_9PHAE8.860e-550.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12442contigL-elsbetiae_contig12442:1423..2274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12442.1991.1mRNA_L-elsbetiae_contig12442.1991.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12442 1423..2824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12442.1991.1 ID=prot_L-elsbetiae_contig12442.1991.1|Name=mRNA_L-elsbetiae_contig12442.1991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
QQEQQLQASPHPARESPSPRPSFSGASSPRLPLGGAARARTSSDGGGGGG
GGGGRSKGGADSVESFESGRGGLSPRRASSSSLSRVRDGGGGAQAGRENL
RTTIGGSGSAARLAKAAAAAAAAVDSAAAAVEQATSGASGSRLPRKPSSG
IPRKLSGTAAAAGASRLTAPASSASSASSRFADRSASIGSSSGGGGGSGG
GGTGGRSISSAGAALRTVQVAADLDAGEDNNSGTGSAGSLPAGTPNKSSG
EGAAAGAGGRRGFIPRPSPKTGRSLIPRRSGRA*
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