prot_L-elsbetiae_contig12433.1987.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12433.1987.1
Unique Nameprot_L-elsbetiae_contig12433.1987.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: D7FYJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ4_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.880e-61
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0
Query:    4 YEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 116
            YEDQQKINEFGRLNTRL+EIRDDKSHIKD LDKL+DATTELMT EGD VMLMLGDSFMECEE++AT+YCERQQE+RQS LDDL DEEK IL RQGVLKKELYARFGSSIQLEA
Sbjct:    8 YEDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQEKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLEA 120          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A6H5KTT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT7_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.060e-38
Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQE 77
            V YEDQQKINEFGRLNTRL+EIR+DKSH+KD LDKL+DATTELMT EGD VMLMLGDSFMECEE++AT+YCERQQE
Sbjct:    2 VSYEDQQKINEFGRLNTRLLEIREDKSHVKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQE 77          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S3YAJ8_HETAK (Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAJ8_HETAK)

HSP 1 Score: 129 bits (325), Expect = 1.670e-36
Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 116
            VR EDQ +INEFG+LN RL EIR+D   +KD  D+L+DA TELMT +GD V + +G+SF++C E+YATEYCE++QE+ Q  LD  K+EE  IL+RQ  LK  LY RFG +I LEA
Sbjct:   13 VRREDQLQINEFGQLNNRLNEIREDCKALKDKFDRLDDANTELMTGDGDDVKIFMGESFIQCSEEYATEYCEKEQEKLQGMLDTFKEEETAILERQKELKVVLYGRFGDAINLEA 127          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S2V806_9STRA (Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V806_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.580e-36
Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 115
            VR+EDQQKINEFGRLNTRL E++ +    K+ LDKL+DA+TELMT +G  V L+LG+ F+EC EDYATEY +++QE+ Q  +D L +EE  IL+RQ  LK+ LYARFGSSI LE
Sbjct:   14 VRWEDQQKINEFGRLNTRLHELQVELKLHKENLDKLDDASTELMTEDGSGVKLLLGEVFIECNEDYATEYLDKEQEKTQVLVDQLSEEEHTILERQKELKEVLYARFGSSINLE 127          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A835Z9N6_9STRA (Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.010e-33
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQ----------------EERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 116
            VR+EDQQ+INEFGRLNTRL E+R D   +K  LD L+DATTELMT +G  V L LGD+F+  EE++ATEYCE++Q                E  Q+ LD L  EE  IL+RQ  LKK LYARFG+SI LEA
Sbjct:   12 VRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A6V0ZXN8_9STRA (Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0ZXN8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.240e-33
Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 116
            VR EDQ  INEFGRLN RL E++    ++K TL+K++DA+TELM  +GD VML LG +  E  ED ATEYCE + E +Q  LD L +EE GI++RQ  LKK LY RFG SI LEA
Sbjct:   19 VRREDQDAINEFGRLNARLDEVKRQVDNLKKTLEKIDDASTELMMGDGDAVMLSLGGAMFEATEDEATEYCEAEVERQQKILDKLSEEEAGIVERQETLKKLLYGRFGKSINLEA 133          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: B5YND4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YND4_THAPS)

HSP 1 Score: 119 bits (299), Expect = 1.830e-32
Identity = 63/114 (55.26%), Postives = 82/114 (71.93%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 115
            VR EDQ KINEFG+LN RL E+R + + +K  L+K++DA+TELM   GD VML LG++  E  ED ATE+CE + E+ Q+ LDDL  EE  I+++Q  LKK LY RFG+SI LE
Sbjct:   19 VRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEMEKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: W7TPN2_9STRA (Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPN2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.200e-32
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 115
            VR EDQ+ INEFGRLN + +E+ +D +++K+ L+KL+DA TELM   G PV L LG++FM+  EDYATE+CER+QE+ Q+ +++L  E+  I  RQ  LKK LY RFGSSI LE
Sbjct:   30 VRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S0B128_9STRA (Prefoldin subunit 4 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B128_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.080e-31
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 115
            VR EDQ+ IN+FGRLN RL E+R ++  IK  L++++DA+TELM   GD VMLMLGD+F E  E+ ATE+CE + E+ Q+ +D+L++EE  IL+ Q  LKK LY RFG SI LE
Sbjct:   20 VRREDQENINKFGRLNARLYEVRGERDAIKKKLERIDDASTELMMGSGDKVMLMLGDAFFESSEEDATEFCEAEVEKFQAVVDNLEEEESEILEEQEKLKKILYTRFGKSINLE 133          
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A1E7F096_9STRA (Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F096_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.450e-30
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    2 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMT-AEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 116
            VR EDQ  IN+F RLN RL E+RD++  IK +L++L+DA+TELM  +EGD VML++G+SF +  E+ ATEYCE + E     L+ L  EE  IL+RQ  LKK LY RFG SIQLEA
Sbjct:   13 VRREDQDNINKFARLNARLHELRDERKIIKQSLERLDDASTELMMGSEGDNVMLLIGESFFDTSEEDATEYCESEVERMSGELEILDGEESTILERQAELKKLLYGRFGKSIQLEA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ4_ECTSI2.880e-6188.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTT7_9PHAE3.060e-3885.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YAJ8_HETAK1.670e-3658.26Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S2V806_9STRA3.580e-3661.40Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica Ta... [more]
A0A835Z9N6_9STRA2.010e-3355.73Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V0ZXN8_9STRA6.240e-3357.39Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi Ta... [more]
B5YND4_THAPS1.830e-3255.26Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
W7TPN2_9STRA7.200e-3255.26Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S0B128_9STRA1.080e-3155.26Prefoldin subunit 4 n=1 Tax=Minutocellus polymorph... [more]
A0A1E7F096_9STRA1.450e-3056.03Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..50
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 6..104
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 7..110
e-value: 1.6E-14
score: 53.7
IPR016661Prefoldin, subunit 4PANTHERPTHR21100FAMILY NOT NAMEDcoord: 1..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12433contigL-elsbetiae_contig12433:2725..5245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12433.1987.1mRNA_L-elsbetiae_contig12433.1987.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12433 2725..5245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12433.1987.1 ID=prot_L-elsbetiae_contig12433.1987.1|Name=mRNA_L-elsbetiae_contig12433.1987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
KVRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGD
PVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVL
KKELYARFGSSIQLEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR016661PFDN4