mRNA_L-elsbetiae_contig12433.1987.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12433.1987.1
Unique NamemRNA_L-elsbetiae_contig12433.1987.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: D7FYJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ4_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.880e-61
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 1 
Query:   10 YEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 348
            YEDQQKINEFGRLNTRL+EIRDDKSHIKD LDKL+DATTELMT EGD VMLMLGDSFMECEE++AT+YCERQQE+RQS LDDL DEEK IL RQGVLKKELYARFGSSIQLEA
Sbjct:    8 YEDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQEKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLEA 120
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A6H5KTT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT7_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.060e-38
Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQE 231
            V YEDQQKINEFGRLNTRL+EIR+DKSH+KD LDKL+DATTELMT EGD VMLMLGDSFMECEE++AT+YCERQQE
Sbjct:    2 VSYEDQQKINEFGRLNTRLLEIREDKSHVKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQE 77
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S3YAJ8_HETAK (Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAJ8_HETAK)

HSP 1 Score: 129 bits (325), Expect = 1.670e-36
Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 348
            VR EDQ +INEFG+LN RL EIR+D   +KD  D+L+DA TELMT +GD V + +G+SF++C E+YATEYCE++QE+ Q  LD  K+EE  IL+RQ  LK  LY RFG +I LEA
Sbjct:   13 VRREDQLQINEFGQLNNRLNEIREDCKALKDKFDRLDDANTELMTGDGDDVKIFMGESFIQCSEEYATEYCEKEQEKLQGMLDTFKEEETAILERQKELKVVLYGRFGDAINLEA 127
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S2V806_9STRA (Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V806_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.580e-36
Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 345
            VR+EDQQKINEFGRLNTRL E++ +    K+ LDKL+DA+TELMT +G  V L+LG+ F+EC EDYATEY +++QE+ Q  +D L +EE  IL+RQ  LK+ LYARFGSSI LE
Sbjct:   14 VRWEDQQKINEFGRLNTRLHELQVELKLHKENLDKLDDASTELMTEDGSGVKLLLGEVFIECNEDYATEYLDKEQEKTQVLVDQLSEEEHTILERQKELKEVLYARFGSSINLE 127
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A835Z9N6_9STRA (Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.010e-33
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQ----------------EERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 348
            VR+EDQQ+INEFGRLNTRL E+R D   +K  LD L+DATTELMT +G  V L LGD+F+  EE++ATEYCE++Q                E  Q+ LD L  EE  IL+RQ  LKK LYARFG+SI LEA
Sbjct:   12 VRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A6V0ZXN8_9STRA (Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0ZXN8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.240e-33
Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 348
            VR EDQ  INEFGRLN RL E++    ++K TL+K++DA+TELM  +GD VML LG +  E  ED ATEYCE + E +Q  LD L +EE GI++RQ  LKK LY RFG SI LEA
Sbjct:   19 VRREDQDAINEFGRLNARLDEVKRQVDNLKKTLEKIDDASTELMMGDGDAVMLSLGGAMFEATEDEATEYCEAEVERQQKILDKLSEEEAGIVERQETLKKLLYGRFGKSINLEA 133
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: B5YND4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YND4_THAPS)

HSP 1 Score: 119 bits (299), Expect = 1.830e-32
Identity = 63/114 (55.26%), Postives = 82/114 (71.93%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 345
            VR EDQ KINEFG+LN RL E+R + + +K  L+K++DA+TELM   GD VML LG++  E  ED ATE+CE + E+ Q+ LDDL  EE  I+++Q  LKK LY RFG+SI LE
Sbjct:   19 VRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEMEKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: W7TPN2_9STRA (Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPN2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.200e-32
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 345
            VR EDQ+ INEFGRLN + +E+ +D +++K+ L+KL+DA TELM   G PV L LG++FM+  EDYATE+CER+QE+ Q+ +++L  E+  I  RQ  LKK LY RFGSSI LE
Sbjct:   30 VRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A7S0B128_9STRA (Prefoldin subunit 4 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B128_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.080e-31
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLE 345
            VR EDQ+ IN+FGRLN RL E+R ++  IK  L++++DA+TELM   GD VMLMLGD+F E  E+ ATE+CE + E+ Q+ +D+L++EE  IL+ Q  LKK LY RFG SI LE
Sbjct:   20 VRREDQENINKFGRLNARLYEVRGERDAIKKKLERIDDASTELMMGSGDKVMLMLGDAFFESSEEDATEFCEAEVEKFQAVVDNLEEEESEILEEQEKLKKILYTRFGKSINLE 133
[Close]
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Match: A0A1E7F096_9STRA (Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F096_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.450e-30
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 1 
Query:    4 VRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMT-AEGDPVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVLKKELYARFGSSIQLEA 348
            VR EDQ  IN+F RLN RL E+RD++  IK +L++L+DA+TELM  +EGD VML++G+SF +  E+ ATEYCE + E     L+ L  EE  IL+RQ  LKK LY RFG SIQLEA
Sbjct:   13 VRREDQDNINKFARLNARLHELRDERKIIKQSLERLDDASTELMMGSEGDNVMLLIGESFFDTSEEDATEYCESEVERMSGELEILDGEESTILERQAELKKLLYGRFGKSIQLEA 128
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12433.1987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ4_ECTSI2.880e-6188.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTT7_9PHAE3.060e-3885.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YAJ8_HETAK1.670e-3658.26Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S2V806_9STRA3.580e-3661.40Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica Ta... [more]
A0A835Z9N6_9STRA2.010e-3355.73Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V0ZXN8_9STRA6.240e-3357.39Prefoldin subunit 4 n=1 Tax=Skeletonema marinoi Ta... [more]
B5YND4_THAPS1.830e-3255.26Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
W7TPN2_9STRA7.200e-3255.26Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S0B128_9STRA1.080e-3155.26Prefoldin subunit 4 n=1 Tax=Minutocellus polymorph... [more]
A0A1E7F096_9STRA1.450e-3056.03Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12433contigL-elsbetiae_contig12433:2725..5245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue8e-47
Seed eggNOG ortholog2880.D7FYJ4
Preferred namePFDN4
KEGG koko:K09550,ko:K20177
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006950,GO:0007021,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0022607,GO:0030163,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033554,GO:0034243,GO:0034622,GO:0035966,GO:0035967,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051603,GO:0051716,GO:0051788,GO:0060255,GO:0065003,GO:0065007,GO:0070887,GO:0071218,GO:0071310,GO:0071629,GO:0071704,GO:0071840,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG1382@1,KOG1760@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110,ko04131
Ec32 ortholog descriptionPrefoldin beta-like
Ec32 orthologEc-23_002980.1
Exons4
Model size351
Cds size351
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12433.1987.1prot_L-elsbetiae_contig12433.1987.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12433 2725..5245 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815439.4220035-CDS-L-elsbetiae_contig12433:2724..27811622815439.4220035-CDS-L-elsbetiae_contig12433:2724..2781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 2725..2781 -
1691682898.4750266-CDS-L-elsbetiae_contig12433:2724..27811691682898.4750266-CDS-L-elsbetiae_contig12433:2724..2781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 2725..2781 -
1622815439.4335155-CDS-L-elsbetiae_contig12433:3206..32691622815439.4335155-CDS-L-elsbetiae_contig12433:3206..3269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 3207..3269 -
1691682898.4944968-CDS-L-elsbetiae_contig12433:3206..32691691682898.4944968-CDS-L-elsbetiae_contig12433:3206..3269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 3207..3269 -
1622815439.443211-CDS-L-elsbetiae_contig12433:4484..46221622815439.443211-CDS-L-elsbetiae_contig12433:4484..4622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 4485..4622 -
1691682898.505092-CDS-L-elsbetiae_contig12433:4484..46221691682898.505092-CDS-L-elsbetiae_contig12433:4484..4622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 4485..4622 -
1622815439.4516199-CDS-L-elsbetiae_contig12433:5152..52451622815439.4516199-CDS-L-elsbetiae_contig12433:5152..5245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 5153..5245 -
1691682898.5135446-CDS-L-elsbetiae_contig12433:5152..52451691682898.5135446-CDS-L-elsbetiae_contig12433:5152..5245Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12433 5153..5245 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12433.1987.1

>prot_L-elsbetiae_contig12433.1987.1 ID=prot_L-elsbetiae_contig12433.1987.1|Name=mRNA_L-elsbetiae_contig12433.1987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
KVRYEDQQKINEFGRLNTRLVEIRDDKSHIKDTLDKLEDATTELMTAEGD
PVMLMLGDSFMECEEDYATEYCERQQEERQSNLDDLKDEEKGILQRQGVL
KKELYARFGSSIQLEA*
back to top

mRNA from alignment at L-elsbetiae_contig12433:2725..5245-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12433.1987.1 ID=mRNA_L-elsbetiae_contig12433.1987.1|Name=mRNA_L-elsbetiae_contig12433.1987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2521bp|location=Sequence derived from alignment at L-elsbetiae_contig12433:2725..5245- (Laminarionema elsbetiae ELsaHSoW15)
AAGGTGCGATACGAGGACCAGCAGAAAATCAACGAGTTCGGCCGCCTCAA
CACGCGCCTTGTGGAAATCAGGGACGACAAATCGCACATCAAGGTAACGT
TGTTCTACCGACAGACAGATAGATAGTGCACGCAGCACCTGCCGGCACAC
AGCTGGAACCAGCTGACACGCCGCCTTCTCTCTTCTTTCCCCCACAGGGG
GTCATTCGCACCCACTGCTCTCTCCAATTGAGCGACCGCGTTTTATTTTT
TGGAGCGGGGCTACGTACAATACATACATAGGTACCCCGTCCGCATCCAC
GAAAATCAAGGATGCCTAAATGTAAACTTGGCATATGATAACGTCTCTGA
TACCTCGCAGCCATAGCCGGGAGGTGTCCCTCTGCTTTACAGCATAGACT
ATACTTATAATACGTGATTTTTTTGACCACCACCACCACCACCACCGTGT
GAGGATTATTTTCTTCCCGCTTAGTGCTCCGGTTTCTGGTGGTCAAACGC
CCTTGGACGTGATGATATATCACTACCACCACCACCGCTACTGCTGTTTT
GTCTGTTGTGAGGGCTCCTTTCTAGTGTTGCGGGTTTTGATGGTCAAGCG
CCCTTTGCCCCCCCCCGAAACAGGACACCTTGGACAAGCTGGAGGACGCG
ACGACGGAGCTCATGACCGCCGAAGGCGACCCGGTGATGCTCATGCTGGG
CGACAGTTTCATGGAGTGCGAGGAGGATTACGCCACGGAGTACTGCGAGC
GGCAGCAGGAGGTATGTACAGAATGCTTTTTCGCGCTATTTATTATGGTC
ATGCAACGCGTTCTGCTGCTGCATTGTATTTGCGCGGGCTGTCTTGTTGT
GTATTTGATTTCTCGCGTGTCGCGGCGCTTGCCCCGCGGGGTTTAACCCG
GAACATGCGGGCTGATGGTGGAGCACCTTGTAGGTACATACTTCGGGAGC
GCGCGCGTGTGCCTGACGGGTCGCATGCACGGTCGCAAATACTCTTTTTT
AATTAAGGGCGAACAGAACAGCACGTTTCATATGGTGTGCACAGAGCGAG
AGGAACCGCGTGCCACGGCGTGCGTCCCTTTTTGCGTTATCTATTTAGCA
CGTGCGTGTGTGTTTTGTTTGGTCTTCTTGTGGGGCGAGTGGGCGTGTCG
TGTGAGACGTGATTTTTCCAGGATTTTTCTGTGCCCCAAGAGGGAGGGCC
TTGCCCCCGCCTCAGCACCAACAATGGGGTCTTCTTTCCGGGTAGATTTT
CGATTTGATGCACCGATTTTACACTTCTTTGCCCCCGCGTAATCTCGGTT
GCAAGCAGCCCTTCGTGCTTAGGCAGCAGTATCGCAAACTCCTCTACCCG
ACACATGGGGAGAGAGCGAGAGAGAGATGCACTTTGCATCAGGAGTGCGC
GCGCACCAATAGATATTTCTTGAAAAACAGCGTGGACTGGAGCCACTCGG
ATTCGAAGTGGTAGGTTAGGTTAGGATGATCCTCTACCAGGGCTTCTACC
CGCACACGCGGGAGAGAGAATGCACTTTGCATCAGGGTCTTTTTTTTTCT
TTTTTTTCTTCACATTTATTTCCAGTGCTCGACGGGCTCCTTTGCCACGA
GAGCATCTCGCGGGAGTACTGGACCGTGGTCACAGAGAAAAGGGTTCCTT
TCCCCGAGCCCCCCACTCCCACCTTCTGCGGTGCTTGCCTAAAGACTTTT
GTCGCGAGAAGGGTTCAGCCGTCCCTTTCCCTTTCCCTCGTCGACCGTGA
GGTCGAAGGGGGTGCCTGCGCACGCACACCAATACATATTGTTTCTTAAA
AAAAAAACAGCGTGGACTGGGGCCGCTCGGATCCACGTGTAGATTTGGAA
TGGTCCGCGGGCGTATGTACGTGTTTTCTACAATATCAGGGCCGTAAAGA
GGTACTACACCCTTCTTCGCTTGACGTGCCGCGCAAACCCTCACCGGACC
GCTTGCTCCTCCTCCGAACGTCGCAGGAGCGACAATCGAACTTGGACGAT
CTCAAAGATGAGGAGAAAGGAATTCTGCAGCGACAGGGGGTGGGTAAAAC
TGCAAGCATGGAAGTATTAAGTATTTAGATTAAAAAAAAAACATCGTCGT
TTTTTTTCCGAGGTGGTTTTGCTATCTACTAAGGGACCAAAGGTAGATTA
AAATATTAATTAGGTGGTATCACTTGGTGGTATGTATGTATGTACTTCTA
CTATGAGTTTGCGTTGTGGAAACACGGTGGTGTGTTCGTGTTGTGTTTTT
TTGGCCACCACCATCAAGCCTGTGCATGTATGTTTATGTGTATGTGTATG
TACAGTGTAATCTGCAATACGCGATATTGCGATGGACTGCGTTACTTCCG
AGTCGAATTCCCTCTAGCACCGCCCGTTGCGTTCGTGTCTGATTCACACA
CACACACACACACCCTCCCCCGCGTGCATCGTCCCCTCTCCACGCTGCCC
CCTACGCTCTTCAGGTTCTCAAGAAGGAATTGTATGCGCGGTTTGGGTCG
TCCATCCAGCTGGAAGCGTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig12433:2725..5245-

>mRNA_L-elsbetiae_contig12433.1987.1 ID=mRNA_L-elsbetiae_contig12433.1987.1|Name=mRNA_L-elsbetiae_contig12433.1987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=702bp|location=Sequence derived from alignment at L-elsbetiae_contig12433:2725..5245- (Laminarionema elsbetiae ELsaHSoW15)
AAGGTGCGATACGAGGACCAGCAGAAAATCAACGAGTTCGGCCGCCTCAA
CACGCGCCTTGTGGAAATCAGGGACGACAAATCGCACATCAAGAAGGTGC
GATACGAGGACCAGCAGAAAATCAACGAGTTCGGCCGCCTCAACACGCGC
CTTGTGGAAATCAGGGACGACAAATCGCACATCAAGGACACCTTGGACAA
GCTGGAGGACGCGACGACGGAGCTCATGACCGCCGAAGGCGACCCGGTGA
TGCTCATGCTGGGCGACAGTTTCATGGAGTGCGAGGAGGATTACGCCACG
GAGTACTGCGAGCGGCAGCAGGAGGACACCTTGGACAAGCTGGAGGACGC
GACGACGGAGCTCATGACCGCCGAAGGCGACCCGGTGATGCTCATGCTGG
GCGACAGTTTCATGGAGTGCGAGGAGGATTACGCCACGGAGTACTGCGAG
CGGCAGCAGGAGGAGCGACAATCGAACTTGGACGATCTCAAAGATGAGGA
GAAAGGAATTCTGCAGCGACAGGGGGAGCGACAATCGAACTTGGACGATC
TCAAAGATGAGGAGAAAGGAATTCTGCAGCGACAGGGGGTTCTCAAGAAG
GAATTGTATGCGCGGTTTGGGTCGTCCATCCAGCTGGAAGCGTAGGTTCT
CAAGAAGGAATTGTATGCGCGGTTTGGGTCGTCCATCCAGCTGGAAGCGT
AG
back to top