prot_L-elsbetiae_contig1243.1982.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1243.1982.1
Unique Nameprot_L-elsbetiae_contig1243.1982.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1243.1982.1 vs. uniprot
Match: D7FWS8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS8_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.010e-13
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:   14 KFINADKRRRAARKKIALEANKRARAEKGRPKRAAKMATLVRLLDAAVQAEPWNVLLHDR--KKGEACGRTAGSRIPEGRRRHP 95
            + I ADKRRRAARK   LEA+++ARAE  RP+R  KMA L+RLLDA ++ EPWN+  H +  +  E CGR     + EG R  P
Sbjct:   16 RVIEADKRRRAARKAKGLEASRKARAEMRRPRRDEKMALLLRLLDAVLEVEPWNLARHTKVSEAWEECGRRVPGYLKEGARTEP 99
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1243.1982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWS8_ECTSI1.010e-1351.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1243contigL-elsbetiae_contig1243:794..1972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1243.1982.1mRNA_L-elsbetiae_contig1243.1982.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1243 16..2193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1243.1982.1 ID=prot_L-elsbetiae_contig1243.1982.1|Name=mRNA_L-elsbetiae_contig1243.1982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MLDVQCKRYLDKAKFINADKRRRAARKKIALEANKRARAEKGRPKRAAKM
ATLVRLLDAAVQAEPWNVLLHDRKKGEACGRTAGSRIPEGRRRHPARWCG
GWPFV*
back to top