prot_L-elsbetiae_contig12407.1968.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12407.1968.1
Unique Name	prot_L-elsbetiae_contig12407.1968.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	217

Homology

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BLAST of mRNA_L-elsbetiae_contig12407.1968.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 3.820e-54
Identity = 131/218 (60.09%), Postives = 148/218 (67.89%), Query Frame = 0

Query:    2 SLRCLVNDKLSNGNAGGSAAVGDPMASAALALDRVDAAIGAFDDSFRLRGAPAGGGAYADVLGHLGLARGSLLLKLG--RLEEARSAVEMVSAGALLVGCSGGGDVHQQHGGAGASLAATSEAELVTAGRPPSLYCRALCVASELDLSEGDTESAKAKLKEVLVVDSRSADALSRLGWLLLGFGSXXXXXXXXXXXXTRERDIEAARPLLERAVGEEP 217
            SLRCLV+++L +G        GDP A+AAL L RVDAA+ AFD+SFRLRG P G G YADVLG LGLAR SLLLKLG  RLEEARSAVEM SAGA+ V         Q   GA   +            RPPSL+CRALCVASE+DL+ G+ E AK KL+E L  ++   DALSRLGWLLLGFG XXXXXXXX        D+EAARPLLERAV EEP
Sbjct:  330 SLRCLVDERLGDGG-------GDPAAAAALGLGRVDAAMTAFDESFRLRGPPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARSAVEMASAGAVHV-------ARQASAGADDGIC-----------RPPSLHCRALCVASEVDLAGGEREQAKGKLREALEAEAGFGDALSRLGWLLLGFGGXXXXXXXXRRAPCEREDVEAARPLLERAVAEEP 522

[Close]

BLAST of mRNA_L-elsbetiae_contig12407.1968.1 vs. uniprot
Match: A0A6H5JAD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD5_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.350e-52
Identity = 126/218 (57.80%), Postives = 147/218 (67.43%), Query Frame = 0

Query:    2 SLRCLVNDKLSNGNAGGSAAVGDPMASAALALDRVDAAIGAFDDSFRLRGAPAGGGAYADVLGHLGLARGSLLLKLG--RLEEARSAVEMVSAGALLVGCSGGGDVHQQHGGAGASLAATSEAELVTAGRPPSLYCRALCVASELDLSEGDTESAKAKLKEVLVVDSRSADALSRLGWLLLGFGSXXXXXXXXXXXXTRERDIEAARPLLERAVGEEP 217
            SLRCLV+++L +G        GDP A+AAL L RVDAA+ AFD+S RLRG P G G YADVLG LGLAR SLLLKLG  RLEEAR+AVEM SAGA+ V                   +A ++  +    RPPSLYCRALCVAS++DL+ G+ E AK KL+E L  ++   DALSRLGWLLLGFG XXXXXXX         D+EAARPLLERAV EEP
Sbjct:  505 SLRCLVDERLGDGG-------GDPAAAAALGLGRVDAAMAAFDESSRLRGKPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARAAVEMASAGAVHVA---------------RQASAVADDGIC---RPPSLYCRALCVASDVDLAGGEREQAKGKLREALEAEAGFGDALSRLGWLLLGFGGXXXXXXXGKRAPCEREDVEAARPLLERAVAEEP 697

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12407.1968.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12407.1968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G059_ECTSI	3.820e-54	60.09	Similar to Tetratricopeptide repeat protein 37 (TP...	[more]
A0A6H5JAD5_9PHAE	2.350e-52	57.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 26..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12407	contig	L-elsbetiae_contig12407:4513..5163 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12407.1968.1	mRNA_L-elsbetiae_contig12407.1968.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12407 4513..5165 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12407.1968.1 ID=prot_L-elsbetiae_contig12407.1968.1|Name=mRNA_L-elsbetiae_contig12407.1968.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
QSLRCLVNDKLSNGNAGGSAAVGDPMASAALALDRVDAAIGAFDDSFRLR
GAPAGGGAYADVLGHLGLARGSLLLKLGRLEEARSAVEMVSAGALLVGCS
GGGDVHQQHGGAGASLAATSEAELVTAGRPPSLYCRALCVASELDLSEGD
TESAKAKLKEVLVVDSRSADALSRLGWLLLGFGSGASASASGCGKGTRER
DIEAARPLLERAVGEEP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf