prot_L-elsbetiae_contig12385.1949.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12385.1949.1
Unique Nameprot_L-elsbetiae_contig12385.1949.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length240
Homology
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.880e-103
Identity = 183/247 (74.09%), Postives = 198/247 (80.16%), Query Frame = 0
Query:    1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDATPAAGAATIGGSSSHSNRKGLHGGXXXXXXXXIGNSG--------PXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAGVNVVEDA 239
            FAGASDE+ITRTIE+AL LPRGTPAV+RDPEDGSALAVSDSLPDGLTVDAT  A  A  GG +    R+    G         GN+                XXXXXXXXXXX  AA EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTD+MGS +MDSTA+ALGVAFV CTLFTY+TGWLRY RVKEVLTWTGSQVKG+FGRFGL+YFTWFLG +LVLTVP+Y +AGVNVVEDA
Sbjct:   34 FAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDAT--AVPACSGGDNDR--RRAESSGNGFYGRGESGNNKNSDAKPAHDSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.570e-33
Identity = 90/240 (37.50%), Postives = 121/240 (50.42%), Query Frame = 0
Query:    1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDA---------TPAA-GAATIGGSSSHSNRK--GLHGGXXXXXXXXIGNSGPXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIY 228
            F GA+D S+ R +  A  LP  +  ++ DP DG  +A+S++LP GL ++          TPA  G A         + K  GL  G                                   ++FRGELLKFERVNAHLANERT+LAWVRTALSVL  A S+ SLT++    +        G  +V+  LFTY TGW+RY++V+ +L    S+VK +FGRFGL +   FL    + T   Y
Sbjct:   27 FPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGRDTPAKEGQAYTSAREDRDSEKSGGLESGDDES----------------------------STGKKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGY 238          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK)

HSP 1 Score: 127 bits (320), Expect = 1.680e-32
Identity = 85/228 (37.28%), Postives = 116/228 (50.88%), Query Frame = 0
Query:    1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDATPAAGAATIGGSSSHSNRKGLHGGXXXXXXXXIGNSGPXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIY 228
            + G +DE + + I  +  LP  T  ++ D  D + +A+S SLP G+ +   P       G  S    R+G+              + P                     QEF+GELLKFERVNAHLANERTWLAWVRTAL+VL  A + + LT++  S         LG  ++   L TY TGWLRYA+V+E+L   GS +K KF RFGL +   +L   L++T   Y
Sbjct:   30 YDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQP-----LEGDPSFDEQRRGV----------LNKKASPDPDEAADGDGSGLQ------GQEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFAS-GTQIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSY 235          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 6.860e-29
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 0
Query:  112 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQY 212
            FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+D+  S S  +    +G   V   LFT++TGWLRY RVK+VL  T S++   FGRFGL +
Sbjct:   91 FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSASQLA-LFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSH 190          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.430e-28
Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query:  108 AAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 232
            A+  FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+DE     +  T   +G   V   L T++TGWLRY RVK+VL      +   FGR GL +   FL   L +    Y+  G
Sbjct:   63 ASMAFRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 6.040e-28
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0
Query:  112 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYL 229
            FRG++LKFERV AHLANERTWLAWVRTAL+ L ++ +L++L+D+     +      +G   V+  LFT++TGWLRY RVK+VL     ++  +FGRFGL +   FL   LV     YL
Sbjct:  115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDDATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLVAISIAYL 232          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.650e-24
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 0
Query:  112 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 232
            F+ ++LKF+R+NAHLANERTWLAW+RT  S+L   L+L +  ++  S +      A+G A ++   FTY+TGW+RY +VKE+L      +  K GR  L+Y T+ + G L     +Y M G
Sbjct:   58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGG 178          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.110e-24
Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 0
Query:  112 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 232
            FR +L+KFE + AHLANERT+LAW+RTAL+ L ++ SL++L  +     + +   ALG AFV     T+LTGWLR+AR++++L    +QV   F R GL +  +F+     L   +YL+ G
Sbjct:   82 FRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN)

HSP 1 Score: 103 bits (258), Expect = 1.100e-23
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 0
Query:  112 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMA 231
            FR +L+KFE + AHLANERTWLAWVRT+LS L VA SL++L  +   + +      LG  F++     +LTGWLRYAR+++VL  T  +V   F R G+++    +G   +     YL A
Sbjct:   88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207          
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.590e-18
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query:  111 EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALAL---GVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 232
            +F+ + +KFERV +HLANERTWLAW+R AL++L  A ++  L D +      + +LAL   G+ +VL    T + GWLRY R K +L  +   +   FG  G+      LG  LV TV  Y   G
Sbjct:   98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCYWSLG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LKT4_ECTSI1.880e-10374.09DUF202 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2Y0E1_9STRA1.570e-3337.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YD22_HETAK1.680e-3237.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2FKJ2_9STRA6.860e-2958.42Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2GM95_9STRA2.430e-2848.80Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WVC3_9STRA6.040e-2849.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G4H1_9STRA5.650e-2442.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3K4A5_9STRA7.110e-2442.98Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
F0YI70_AURAN1.100e-2343.33Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S2DFA2_9STRA7.590e-1840.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 125..190
e-value: 6.1E-15
score: 55.4
NoneNo IPR availablePANTHERPTHR34187:SF2INNER MEMBRANE PROTEIN YIDHcoord: 124..196
NoneNo IPR availablePANTHERPTHR34187FAMILY NOT NAMEDcoord: 124..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 232..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..231
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..164
NoneNo IPR availableTMHMMTMhelixcoord: 133..150
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 208..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12385contigL-elsbetiae_contig12385:1710..2579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12385.1949.1mRNA_L-elsbetiae_contig12385.1949.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12385 1710..2579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12385.1949.1 ID=prot_L-elsbetiae_contig12385.1949.1|Name=mRNA_L-elsbetiae_contig12385.1949.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDA
TPAAGAATIGGSSSHSNRKGLHGGGGGGGSSSIGNSGPGDGDGGRGGGGG
GGGGGVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLI
SLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQ
VKGKFGRFGLQYFTWFLGGALVLTVPIYLMAGVNVVEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202