mRNA_L-elsbetiae_contig12385.1949.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.880e-103 Identity = 183/247 (74.09%), Postives = 198/247 (80.16%), Query Frame = 1 Query: 1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDATPAAGAATIGGSSSHSNRKGLHGGXXXXXXXXIGNSG--------PXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAGVNVVEDA 717 FAGASDE+ITRTIE+AL LPRGTPAV+RDPEDGSALAVSDSLPDGLTVDAT A A GG + R+ G GN+ XXXXXXXXXXX AA EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTD+MGS +MDSTA+ALGVAFV CTLFTY+TGWLRY RVKEVLTWTGSQVKG+FGRFGL+YFTWFLG +LVLTVP+Y +AGVNVVEDA Sbjct: 34 FAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDAT--AVPACSGGDNDR--RRAESSGNGFYGRGESGNNKNSDAKPAHDSAGGIGXXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.570e-33 Identity = 90/240 (37.50%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDA---------TPAA-GAATIGGSSSHSNRK--GLHGGXXXXXXXXIGNSGPXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIY 684 F GA+D S+ R + A LP + ++ DP DG +A+S++LP GL ++ TPA G A + K GL G ++FRGELLKFERVNAHLANERT+LAWVRTALSVL A S+ SLT++ + G +V+ LFTY TGW+RY++V+ +L S+VK +FGRFGL + FL + T Y Sbjct: 27 FPGATDASLHRLVLDAFSLPLHSRFLLVDPADGCIVALSENLPSGLVLNVQHVQTQGRDTPAKEGQAYTSAREDRDSEKSGGLESGDDES----------------------------STGKKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGY 238
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK) HSP 1 Score: 127 bits (320), Expect = 1.680e-32 Identity = 85/228 (37.28%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 1 FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDATPAAGAATIGGSSSHSNRKGLHGGXXXXXXXXIGNSGPXXXXXXXXXXXXXXXXXVGAAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIY 684 + G +DE + + I + LP T ++ D D + +A+S SLP G+ + P G S R+G+ + P QEF+GELLKFERVNAHLANERTWLAWVRTAL+VL A + + LT++ S LG ++ L TY TGWLRYA+V+E+L GS +K KF RFGL + +L L++T Y Sbjct: 30 YDGTTDEGLEKLIADSFSLPSKTRFILIDSADNTTIALSSSLPSGIELQIQP-----LEGDPSFDEQRRGV----------LNKKASPDPDEAADGDGSGLQ------GQEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFAS-GTQIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSY 235
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.860e-29 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 334 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQY 636 FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+D+ S S + +G V LFT++TGWLRY RVK+VL T S++ FGRFGL + Sbjct: 91 FRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSASQLA-LFVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSH 190
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.430e-28 Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 322 AAQEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 696 A+ FRG++LKFERV AHLANERTWLAWVRTALS L +A SL++L+DE + T +G V L T++TGWLRY RVK+VL + FGR GL + FL L + Y+ G Sbjct: 63 ASMAFRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.040e-28 Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 334 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYL 687 FRG++LKFERV AHLANERTWLAWVRTAL+ L ++ +L++L+D+ + +G V+ LFT++TGWLRY RVK+VL ++ +FGRFGL + FL LV YL Sbjct: 115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDDATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLVAISIAYL 232
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.650e-24 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 334 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 696 F+ ++LKF+R+NAHLANERTWLAW+RT S+L L+L + ++ S + A+G A ++ FTY+TGW+RY +VKE+L + K GR L+Y T+ + G L +Y M G Sbjct: 58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGG 178
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA) HSP 1 Score: 104 bits (259), Expect = 7.110e-24 Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 334 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 696 FR +L+KFE + AHLANERT+LAW+RTAL+ L ++ SL++L + + + ALG AFV T+LTGWLR+AR++++L +QV F R GL + +F+ L +YL+ G Sbjct: 82 FRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN) HSP 1 Score: 103 bits (258), Expect = 1.100e-23 Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 334 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALALGVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMA 693 FR +L+KFE + AHLANERTWLAWVRT+LS L VA SL++L + + + LG F++ +LTGWLRYAR+++VL T +V F R G+++ +G + YL A Sbjct: 88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYLCA 207
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 7.590e-18 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 331 EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDEMGSTSMDSTALAL---GVAFVLCTLFTYLTGWLRYARVKEVLTWTGSQVKGKFGRFGLQYFTWFLGGALVLTVPIYLMAG 696 +F+ + +KFERV +HLANERTWLAW+R AL++L A ++ L D + + +LAL G+ +VL T + GWLRY R K +L + + FG G+ LG LV TV Y G Sbjct: 98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCYWSLG 222 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12385.1949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12385.1949.1 >prot_L-elsbetiae_contig12385.1949.1 ID=prot_L-elsbetiae_contig12385.1949.1|Name=mRNA_L-elsbetiae_contig12385.1949.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp FAGASDESITRTIEIALGLPRGTPAVIRDPEDGSALAVSDSLPDGLTVDAback to top mRNA from alignment at L-elsbetiae_contig12385:1710..2579- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12385.1949.1 ID=mRNA_L-elsbetiae_contig12385.1949.1|Name=mRNA_L-elsbetiae_contig12385.1949.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig12385:1710..2579- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12385:1710..2579- >mRNA_L-elsbetiae_contig12385.1949.1 ID=mRNA_L-elsbetiae_contig12385.1949.1|Name=mRNA_L-elsbetiae_contig12385.1949.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig12385:1710..2579- (Laminarionema elsbetiae ELsaHSoW15)back to top |