prot_L-elsbetiae_contig12373.1945.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12373.1945.1
Unique Nameprot_L-elsbetiae_contig12373.1945.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
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BLAST of mRNA_L-elsbetiae_contig12373.1945.1 vs. uniprot
Match: D8LN24_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN24_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.470e-49
Identity = 98/118 (83.05%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:    1 RFYDDDGDEGTSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGVGGSSRFSAGPRSQASFAANSVAASGRSVQSSVARGGAPSIASSRSNFPPRGGVSPPYSLGGGGDGGGASPLAGMV 118
            ++Y+DDG   TSDWGGTDLTGAAMGGSILGPEFPLRKGMVGG G SSRFSAGPRSQASFAANSVAASGRSVQSSV  GGA    SSRSNFPPRGG+SPPYSLGG G GGGASPL G+ 
Sbjct:  151 KYYEDDG---TSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGGGPSSRFSAGPRSQASFAANSVAASGRSVQSSVTIGGA----SSRSNFPPRGGISPPYSLGGAG-GGGASPLRGLA 260
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BLAST of mRNA_L-elsbetiae_contig12373.1945.1 vs. uniprot
Match: A0A6H5KYX6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX6_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.010e-44
Identity = 93/116 (80.17%), Postives = 96/116 (82.76%), Query Frame = 0 
Query:    3 YDDDGDEGTSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGVGGSSRFSAGPRSQASFAANSVAASGRSVQSSVARGGAPSIASSRSNFPPRGGVSPPYSLGGGGDGGGASPLAGMV 118
            Y +DGD   SDWGGTDLTGAAMGGSILGPEFPLRKGMVGG G SSRFSAGPRSQASFAANSVAASGRS+QSSV  GGA    SSRSNFPPRGG SPPYSLGGG     ASPL G+ 
Sbjct:  186 YYEDGD--MSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGGGPSSRFSAGPRSQASFAANSVAASGRSIQSSVTTGGA----SSRSNFPPRGGTSPPYSLGGG-----ASPLRGLA 290
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12373.1945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN24_ECTSI1.470e-4983.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KYX6_9PHAE3.010e-4480.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12373contigL-elsbetiae_contig12373:1210..4559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12373.1945.1mRNA_L-elsbetiae_contig12373.1945.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12373 1210..4559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12373.1945.1 ID=prot_L-elsbetiae_contig12373.1945.1|Name=mRNA_L-elsbetiae_contig12373.1945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
RFYDDDGDEGTSDWGGTDLTGAAMGGSILGPEFPLRKGMVGGVGGSSRFS
AGPRSQASFAANSVAASGRSVQSSVARGGAPSIASSRSNFPPRGGVSPPY
SLGGGGDGGGASPLAGMVGIEG
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