prot_L-elsbetiae_contig1234.1926.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1234.1926.1
Unique Nameprot_L-elsbetiae_contig1234.1926.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 1.530e-75
Identity = 117/155 (75.48%), Postives = 130/155 (83.87%), Query Frame = 0
Query:    1 MSLLRRSALGFLQEFVRGCKNPRQGQYSKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAKLAAGELSGFEHVSEEDDGTEGGLLAEEGQQ 155
            MSLLRR+ +G LQ   RGCKNP++ Q+SKRSQIGLYAGKDI FGNTISFSHKKN+RTWKPNVQKKALYSE LDEWIKF LTTHALRCVDRAGGIDKYLLKTPD+WLNS QGS AKRKI+E LAA+   G+ SG  H  EE+ G + GL AE G+Q
Sbjct:    1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAAR---GDSSGELHAGEEEGGADAGLRAEGGRQ 152          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.540e-37
Identity = 63/98 (64.29%), Postives = 78/98 (79.59%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAK 125
            S RS+ G+YAGKDIRFGN ISFSH+K +RT+KPN Q+K L+SE L  W++F LTTHALRC+DRAGGID YLLKTPD  L S  G+NA+R I+   A++
Sbjct:   60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASR 157          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.630e-31
Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVL 122
            S R+  GL+  KDIRFGN +S S +K +R+WKPN Q K L+SE L+E++KF+ TT+ L+C+D+ GG+D YLL+TPDK LNS  G  AKR+I+EVL
Sbjct:   18 SGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVL 112          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.160e-31
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAK 125
            S R+  GL+ GKD+RFGN +S S +K +R WKPNVQ+K L+SE L ++++F +T HA+RCVD+AGG+D YLL  PDK L S QG  AK KI E L AK
Sbjct:   16 SGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQAK 113          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.860e-30
Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAK 125
            S R+  GLY GKD+ FGN +S S +K +R WKPNVQKK L+SE L +W+KF +TT A+RCVD+AGG+D YLL   D  + S QG  AKR+I+  LA K
Sbjct:   42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALAEK 139          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.180e-30
Identity = 52/99 (52.53%), Postives = 76/99 (76.77%), Query Frame = 0
Query:   28 SKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAKL 126
            S R++ GLY  KD+R GN++SFS +K +R WKPNVQ K  +S++L  W++F++TTHA++C+D+ GGIDKY+L+TP+  LNS  G+NAKR    +L +KL
Sbjct:   37 SNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKR----MLLSKL 131          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: D3BM00_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BM00_POLPP)

HSP 1 Score: 114 bits (285), Expect = 1.540e-29
Identity = 52/111 (46.85%), Postives = 74/111 (66.67%), Query Frame = 0
Query:   15 FVRGCKNPRQGQYSKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVLAAK 125
            F R   NP      KR+Q  LY G+ I++GN+ISFSHKK +RTWKPNVQ K  +S++L++ IK  +TT+ +RC+D+AG  D Y++ T DK L+S  GS+ K  ++  L  K
Sbjct:   12 FTRASNNPHSANILKRAQRALYGGRTIQYGNSISFSHKKTRRTWKPNVQSKTYHSDILNQDIKVDVTTYTMRCIDKAGNFDNYIINTKDKDLDSKLGSDLKVLLKSTLREK 122          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.730e-29
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    4 LRRSALGFLQEFVRGCKNPRQGQYSKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVL 122
            +R+SA+ FL+ F R    P    YS RSQ G+YAGKD+RFGN   FS KK++R W PNVQ K L+SE+L E I  ++TT ALR VD+AGG+D YLL T D  L S+Q S    ++ E +
Sbjct:    5 VRQSAVKFLEGFTRASSKP--NLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAI 121          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: A0A7S2V663_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V663_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.780e-28
Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0
Query:    5 RRSALGFLQEFVRGCKNPRQGQYSKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDK---WLNSAQGSNAKRKIQEVLAAK 125
            R  +  FL  F+RG         S R+  GLYAGKDIRFGN++S S++K +R++KPNV  K L+S++LD WI F+++ HALRC+D AGG+D Y+L+   K   W +S Q   A++++ E L AK
Sbjct:    6 RHVSFSFLSNFIRG---------SGRASRGLYAGKDIRFGNSVSHSNRKTRRSFKPNVFNKRLWSDILDRWIPFKVSAHALRCIDHAGGLDNYILRNSLKTGDW-DSTQAVRARKEMLEALEAK 119          
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Match: F4Q7J9_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7J9_CAVFA)

HSP 1 Score: 108 bits (270), Expect = 3.170e-27
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   21 NPRQGQYSKRSQIGLYAGKDIRFGNTISFSHKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLKTPDKWLNSAQGSNAKRKIQEVL 122
            NP      KRSQ GLY GK I++GN ISFSHKK +R WKPNVQ K  +S +LD  +K  +TT+ +RC+D+AG  D Y+LKT +K + S  G++ K  ++ VL
Sbjct:   18 NPHYANLMKRSQRGLYGGKLIQYGNIISFSHKKTRRNWKPNVQAKTYFSHLLDAEVKVNVTTYTIRCIDKAGTFDNYILKTKNKDMASELGTDLKSVLKNVL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1234.1926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS33_9PHAE1.530e-7575.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZX50_9STRA2.540e-3764.29Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2RZD4_9STRA1.630e-3156.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HHC9_9STRA2.160e-3157.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C450_9STRA1.860e-3056.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3K4M7_9STRA9.180e-3052.53Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D3BM00_POLPP1.540e-2946.85Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A835YSL8_9STRA9.730e-2951.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V663_9STRA5.780e-2845.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F4Q7J9_CAVFA3.170e-2750.00Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 36..90
e-value: 5.2E-19
score: 68.2
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 26..149
IPR037147Ribosomal protein L28/L24 superfamilyGENE3D2.30.170.40coord: 20..127
e-value: 1.8E-36
score: 126.9
IPR001383Ribosomal protein L28HAMAPMF_00373Ribosomal_L28coord: 30..97
score: 13.213
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 31..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1234contigL-elsbetiae_contig1234:968..2810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1234.1926.1mRNA_L-elsbetiae_contig1234.1926.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1234 919..3357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1234.1926.1 ID=prot_L-elsbetiae_contig1234.1926.1|Name=mRNA_L-elsbetiae_contig1234.1926.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MSLLRRSALGFLQEFVRGCKNPRQGQYSKRSQIGLYAGKDIRFGNTISFS
HKKNQRTWKPNVQKKALYSEVLDEWIKFQLTTHALRCVDRAGGIDKYLLK
TPDKWLNSAQGSNAKRKIQEVLAAKLAAGELSGFEHVSEEDDGTEGGLLA
EEGQQKERQAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026569Ribo_L28/L24
IPR037147Ribo_L28/L24_sf
IPR001383Ribosomal_L28
IPR034704L28p-like