prot_L-elsbetiae_contig1233.1922.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1233.1922.1
Unique Nameprot_L-elsbetiae_contig1233.1922.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length173
Homology
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BLAST of mRNA_L-elsbetiae_contig1233.1922.1 vs. uniprot
Match: A0A835ZD32_9STRA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD32_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.550e-7
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:  128 VAAAHELRRSLTPPHQSLFRVVCILVYEDSAGKLHQITG 166
            V  AH LRRSL PPHQS FRVVC++ YED  G  H +TG
Sbjct:   29 VTMAHRLRRSLEPPHQSRFRVVCVIEYEDDGGATHVVTG 67
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1233.1922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZD32_9STRA3.550e-764.10CMP/dCMP-type deaminase domain-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1233contigL-elsbetiae_contig1233:24470..25852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1233.1922.1mRNA_L-elsbetiae_contig1233.1922.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1233 24470..25873 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1233.1922.1 ID=prot_L-elsbetiae_contig1233.1922.1|Name=mRNA_L-elsbetiae_contig1233.1922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp
MLQYLRCSALCRTGIPLRPRSTRKTMSGGRPLGSSFSSTATASSRGRGGG
GGGGGGRVHFSARRGPLPSTLAAASAAAVGGVALIACIAAAESSRPGSSV
LAAASTRAAVPAVVEKEQEEEGENATLVAAAHELRRSLTPPHQSLFRVVC
ILVYEDSAGKLHQITGEYVHKY*
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