prot_L-elsbetiae_contig12325.1919.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12325.1919.1
Unique Nameprot_L-elsbetiae_contig12325.1919.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.530e-60
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 MIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 111
            MIQMVNELLPSSSSSVASASV+WLNEK EDFALY ELEKAFF NHRKLDVSCIVERDLFG+HLEAN NV  A+P+FK+GTLAAVAGP+FFTRKVTDYL+RRGYPE+ II L
Sbjct:   68 MIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178          
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.930e-57
Identity = 95/111 (85.59%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 MIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 111
            MIQMVNELLPSSSSSVASASV+WLNEK EDFALY ELEKAFF NHRKLDVSCIVERDLFG+HLEAN NV  A+P+FK+GTLAAVAGP+FFTRKVTDYL+RRGYPE+ II L
Sbjct:  324 MIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434          
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.120e-42
Identity = 71/109 (65.14%), Postives = 88/109 (80.73%), Query Frame = 0
Query:    1 MIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETII 109
            M+Q+V ELLP+  SSV +ASV+WLNE  EDFALYGELE+AF+  HRKLDV+CI+ERDLFG+ L  N  V EA P F++GTLA V+GP+FF  KV DYL+R+GYP+E II
Sbjct:  238 MLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVII 346          
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A4D9DFZ6_9STRA (FAD_binding_6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFZ6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.940e-19
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    2 IQMVNELLPSSSS-SVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 111
            +Q +N LLPS+   SV  A+V+W+NE+ + + L  +L+  F+  + KLDV  + ERDLF   L  NP    + P     TL  VAGPE+FT KV DYL + GY E+ I+ L
Sbjct:  316 LQFLNALLPSAGGYSVDFANVVWVNERQDQYILQNDLQDLFYRYNSKLDVYTVAERDLFMGDLGHNPQFRASIPPPSKETLVLVAGPEYFTAKVVDYLTKSGYTEDVIVTL 426          
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: K0RP22_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RP22_THAOC)

HSP 1 Score: 83.6 bits (205), Expect = 1.510e-16
Identity = 47/103 (45.63%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   10 PSSSSSVASASVIWLNEKTEDFAL-YGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 111
            P  SSSV  +SVIW+N+K +DF L   +LE  +     KL VSCI++       LE N  V EA P F  GT+A V+GP+ F  K   YLM+RGYP+  I  L
Sbjct:  317 PKGSSSVKVSSVIWMNDKRDDFDLAMDDLEAEYMKYSTKLAVSCIMDDSASSGTLEGNREVEEAVPYFNPGTMAVVSGPKRFADKAEGYLMKRGYPKNCICVL 419          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KGP4_9PHAE1.530e-6085.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMW3_ECTSI3.930e-5785.59Cytochrome b5 reductase domain-containing protein ... [more]
A0A836CM13_9STRA7.120e-4265.14Cytochrome b5 reductase domain-containing protein ... [more]
A0A4D9DFZ6_9STRA4.940e-1943.24FAD_binding_6 domain-containing protein n=2 Tax=Mo... [more]
K0RP22_THAOC1.510e-1645.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainGENE3D3.40.50.80coord: 1..110
e-value: 5.9E-5
score: 25.1
IPR039261Ferredoxin-NADP reductase (FNR), nucleotide-binding domainSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12325contigL-elsbetiae_contig12325:1696..4631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12325.1919.1mRNA_L-elsbetiae_contig12325.1919.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12325 1607..4767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12325.1919.1 ID=prot_L-elsbetiae_contig12325.1919.1|Name=mRNA_L-elsbetiae_contig12325.1919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDV
SCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMR
RGYPEETIIKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039261FNR_nucleotide-bd