mRNA_L-elsbetiae_contig12325.1919.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE) HSP 1 Score: 239 bits (609), Expect = 7.860e-78 Identity = 118/140 (84.29%), Postives = 128/140 (91.43%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PGR LVYGG +QPITDLVL+A GVGVVPMIQMVNELLPSSSSSVASASV+WLNEK EDFALY ELEKAFF NHRKLDVSCIVERDLFG+HLEAN NV A+P+FK+GTLAAVAGP+FFTRKVTDYL+RRGYPE+ II L Sbjct: 39 PGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI) HSP 1 Score: 241 bits (615), Expect = 2.500e-75 Identity = 119/140 (85.00%), Postives = 129/140 (92.14%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PGR GLVYGG +QPITDLVL+A GVGVVPMIQMVNELLPSSSSSVASASV+WLNEK EDFALY ELEKAFF NHRKLDVSCIVERDLFG+HLEAN NV A+P+FK+GTLAAVAGP+FFTRKVTDYL+RRGYPE+ II L Sbjct: 295 PGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.890e-55 Identity = 91/138 (65.94%), Postives = 110/138 (79.71%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETII 416 PGR L Y GP PITD+VLIA G+GVVPM+Q+V ELLP+ SSV +ASV+WLNE EDFALYGELE+AF+ HRKLDV+CI+ERDLFG+ L N V EA P F++GTLA V+GP+FF KV DYL+R+GYP+E II Sbjct: 209 PGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVII 346
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: B8CAB2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB2_THAPS) HSP 1 Score: 118 bits (296), Expect = 3.790e-28 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFAL-YGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG+ L Y G P+TD+V IA+G+G+VP++ V + P +SSV SV+W+N++ DF L ELE + KL VSCI++ D+ N +E N V EA P F GT+A ++GP+ F+ K YLMR+GYPE I L Sbjct: 305 PGKTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGTSSVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: K0RP22_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RP22_THAOC) HSP 1 Score: 118 bits (295), Expect = 3.920e-28 Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFAL-YGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG+ L YGG P+TD+V + +G+G+VP++ + P SSSV +SVIW+N+K +DF L +LE + KL VSCI++ LE N V EA P F GT+A V+GP+ F K YLM+RGYP+ I L Sbjct: 279 PGKSHLAYGGQHVPVTDMVYLTSGLGIVPILDQIRATSPKGSSSVKVSSVIWMNDKRDDFDLAMDDLEAEYMKYSTKLAVSCIMDDSASSGTLEGNREVEEAVPYFNPGTMAVVSGPKRFADKAEGYLMKRGYPKNCICVL 419
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC) HSP 1 Score: 115 bits (289), Expect = 3.070e-27 Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGEL-EKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG L Y G P+T +V IA G G+VP++ V +LP+ SSSV S SV+W+NE+ +DF + EL EK ++ +KL VSC+V+ + L N V A PDF GT+A +AGP +K +L RGYP +TI L Sbjct: 287 PGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSSSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.510e-27 Identity = 62/141 (43.97%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFAL-YGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG L Y G P+TD+V +A+GVG+VP++ V +LPS SSSV S++W+N +DF + ELE+ +F + KL VSCI E ++ LE N + EA PDF GT+A ++GP F+ K YL RGYPE+ + L Sbjct: 328 PGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGSSSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A7S2XRE5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE5_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.230e-25 Identity = 62/146 (42.47%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFAL-YGELEKAFFLNHRKLDVSCIVERDLFGNHLEA-----NPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG + L Y G P+TD+V +A+G G+VP+++ V +LPS SSV + SV+W+N DF + LEK +F +KL VSC+VE G EA N + EA P+F GT+A ++GP F K YL+ RGYPE+ I L Sbjct: 371 PGPQTLHYRGQYLPVTDMVYMASGPGIVPIVEQVRAVLPSGKSSVKAVSVVWINHNAHDFDVALDALEKEYFKYSKKLLVSCLVEPKWNGKKSEAPRMDQNDEINEAVPNFNPGTMAVLSGPRRFADKAKIYLISRGYPEDCICVL 516
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A7S3KXF0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXF0_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.140e-24 Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGE-LEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKVGTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG L Y G P+TD++ +A G G+VP+++ +LP SSSVA+ +V+W+NE+T+DF + E LEK +F KL VSCIV+ + + N + A PDFK GT+A +AGP K YL RGYP +TI L Sbjct: 291 PGDTRLNYRGQYLPVTDILYVACGNGIVPVLEQARAVLPRGSSSVAAVTVVWINEETKDFDVLAEVLEKEYFKYSDKLAVSCIVDSPRRRDWSDNN-EINAAVPDFKQGTMAVLAGPTDLMEKAFYYLEDRGYPSDTICVL 430
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.820e-24 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 3 PGREGLVYGGPDQPITDLVLIATGVGVVPMIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVSCIVERDLFGNHLEANPNVCEAAPDFKV-GTLAAVAGPEFFTRKVTDYLMRRGYPEETIIKL 422 PG E L Y G PI D+ IA+G+G+VP + ++NELLPS +SSV +A+++W+NE DF Y ++E ++ +KLDVSC+++ D FG+ L N + PD V G + VAGPE F V L + +PE I+ L Sbjct: 320 PGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRASSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12325.1919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12325.1919.1 >prot_L-elsbetiae_contig12325.1919.1 ID=prot_L-elsbetiae_contig12325.1919.1|Name=mRNA_L-elsbetiae_contig12325.1919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp MIQMVNELLPSSSSSVASASVIWLNEKTEDFALYGELEKAFFLNHRKLDVback to top mRNA from alignment at L-elsbetiae_contig12325:1607..4767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12325.1919.1 ID=mRNA_L-elsbetiae_contig12325.1919.1|Name=mRNA_L-elsbetiae_contig12325.1919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3161bp|location=Sequence derived from alignment at L-elsbetiae_contig12325:1607..4767+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12325:1607..4767+ >mRNA_L-elsbetiae_contig12325.1919.1 ID=mRNA_L-elsbetiae_contig12325.1919.1|Name=mRNA_L-elsbetiae_contig12325.1919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig12325:1607..4767+ (Laminarionema elsbetiae ELsaHSoW15)back to top |