prot_L-elsbetiae_contig12321.1918.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12321.1918.1
Unique Nameprot_L-elsbetiae_contig12321.1918.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length78
Homology
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BLAST of mRNA_L-elsbetiae_contig12321.1918.1 vs. uniprot
Match: D7FSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD6_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 4.460e-11
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:    5 EAAEAAAARTGASNGRTSGWDLSGKDDTGIRPQQRKTRLSYLLAAEGDND 54
            EAA AAAA TGAS+GR SGWDLSG  DTG+RPQ++ TRLSYL+ ++   D
Sbjct:  110 EAAAAAAALTGASSGRKSGWDLSGGGDTGVRPQEKHTRLSYLVGSDSSGD 159
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BLAST of mRNA_L-elsbetiae_contig12321.1918.1 vs. uniprot
Match: A0A6H5JS13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS13_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.980e-10
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:   12 ARTGASNGRTSGWDLSGKDDTGIRPQQRKTRLSYLLAAEGDNDDATSGGGG 62
            A TGAS+GR SGWDLSG+ DTG+RPQ + TRLSYL+  E   DD  SG GG
Sbjct:  132 ALTGASSGRKSGWDLSGEGDTGVRPQAKHTRLSYLVEPESGGDDRESGRGG 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12321.1918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSD6_ECTSI4.460e-1166.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS13_9PHAE2.980e-1064.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12321contigL-elsbetiae_contig12321:3302..3535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12321.1918.1mRNA_L-elsbetiae_contig12321.1918.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12321 3292..3535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12321.1918.1 ID=prot_L-elsbetiae_contig12321.1918.1|Name=mRNA_L-elsbetiae_contig12321.1918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
MKAAEAAEAAAARTGASNGRTSGWDLSGKDDTGIRPQQRKTRLSYLLAAE
GDNDDATSGGGGDGRGDDGRKQQDGSAD
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