prot_L-elsbetiae_contig12318.1913.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12318.1913.1
Unique Nameprot_L-elsbetiae_contig12318.1913.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length208
Homology
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: D7FJJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ2_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.360e-98
Identity = 148/187 (79.14%), Postives = 167/187 (89.30%), Query Frame = 0
Query:    2 LVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            LVDTPQI WHGGEAGK APILSLDTHPL LD   G  G+R +LATAGTDAEVRLW+VN+PT+EDA  WEQ G+S R+Q+FV+SLGGH+RGVN VRFSPDGLSLASASDGGTVVIWSVE +AAWST+ SDR+T+K ILRGAT DIYDM+WSP+S+Y+ CGSIDRRAH+WEV TKRSIATLEDHANYVQ
Sbjct:    3 LVDTPQIVWHGGEAGKNAPILSLDTHPLALD--GGHQGSRVVLATAGTDAEVRLWIVNRPTQEDAKNWEQAGVSSRLQTFVASLGGHQRGVNAVRFSPDGLSLASASDGGTVVIWSVEDVAAWSTIKSDRDTRKNILRGATEDIYDMAWSPDSKYITCGSIDRRAHVWEVATKRSIATLEDHANYVQ 187          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A836CAR4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.400e-35
Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 0
Query:    1 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPS---------GAAGA-----RFILATAGTDAEVRLWVVNQPTREDAGVWEQPG---LSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            MLVDTPQI WH GEA K  PI S D HP  L Q +          A+ A      +++ATAG   EV L+ V  P   D   W+ P     S R+Q F+++L GH+  VNV RFSP GL LA+A D GTV++WSV +   W T     +  +  L  ++  +YD++W+P SR LA   ID+   +W+   ++  AT +DH  +VQ
Sbjct:    1 MLVDTPQIIWHAGEANKNVPIYSCDIHPSPLPQSTDRRSKHGDPAASDATDNATEYVMATAGIANEVHLFAVKAPGLADPR-WDVPDGGTASVRLQRFLTALSGHDCVVNVARFSPHGLCLATAGDNGTVIVWSVASAGDWGT--EGLKPSRYSLNASSMGVYDLAWAPGSRLLASVGIDKTMRVWDCVARQCAATAQDHKQFVQ 202          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: K8Z5F2_NANGC (Transducin wd40 domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5F2_NANGC)

HSP 1 Score: 137 bits (346), Expect = 1.460e-34
Identity = 75/193 (38.86%), Postives = 108/193 (55.96%), Query Frame = 0
Query:    1 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSV---ETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRS--IATLEDHANYVQ 188
            M + TPQI WHGGEAGK  P+LS D HP              +LAT G DAEVRLW+++    E++          + Q ++ +   H+R VN VRFSPDG +LA+ASDGG + ++ +        W      R     ++R   +DIYD++WSP SR L   S+D +  +W+VT ++S  ++T   H+NYVQ
Sbjct:    1 MKITTPQITWHGGEAGKNDPVLSADVHPC------------GVLATGGADAEVRLWLLHLDENEES----------KFQDYLYNFENHQRSVNSVRFSPDGRALATASDGGVIFVYLLPPGRPTRFWRRPMCQRMVLCRLVRTTQSDIYDLAWSPSSRELCSVSVDSKVAVWDVTGEKSPLLSTFTSHSNYVQ 171          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A024TEX7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEX7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.210e-30
Identity = 84/224 (37.50%), Postives = 118/224 (52.68%), Query Frame = 0
Query:    1 MLVDTPQICWHGGEAGKAAPILSLD--------------------THPLVLDQPSGAAGAR-------FILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWS-----VETLAA---WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            M VDTP+I WH G  G    +L++D                    + P+  D PS ++ +         +LATAG+D EVRLW++  PT +   V            FV +L  H+R VN VRFSPDG  LASASD  T+V+WS     V+  A+   WST++S+ +  + +L  G   DI D+SWSP+S+YL   S+D  A IW V T + I   +DH+ +VQ
Sbjct:   36 MRVDTPEIRWHYGPTGLNEAVLTIDYLRRPILPSAATGGEIDTMSSTPVAADVPSSSSRSTPQQTSLPTVLATAGSDKEVRLWIM--PTDDPLPV------------FVYTLSAHDRSVNCVRFSPDGSILASASDDSTIVLWSRPKHLVDDDASSWDWSTVASNSDVGRVLLACGHKGDITDLSWSPDSQYLCSVSVDNTASIWHVPTAKLIEKRKDHSQFVQ 245          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A024TCY2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCY2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.390e-30
Identity = 84/224 (37.50%), Postives = 118/224 (52.68%), Query Frame = 0
Query:    1 MLVDTPQICWHGGEAGKAAPILSLD--------------------THPLVLDQPSGAAGAR-------FILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWS-----VETLAA---WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            M VDTP+I WH G  G    +L++D                    + P+  D PS ++ +         +LATAG+D EVRLW++  PT +   V            FV +L  H+R VN VRFSPDG  LASASD  T+V+WS     V+  A+   WST++S+ +  + +L  G   DI D+SWSP+S+YL   S+D  A IW V T + I   +DH+ +VQ
Sbjct:   36 MRVDTPEIRWHYGPTGLNEAVLTIDYLRRPILPSAATGGEIDTMSSTPVAADVPSSSSRSTPQQTSLPTVLATAGSDKEVRLWIM--PTDDPLPV------------FVYTLSAHDRSVNCVRFSPDGSILASASDDSTIVLWSRPKHLVDDDASSWDWSTVASNSDVGRVLLACGHKGDITDLSWSPDSQYLCSVSVDNTASIWHVPTAKLIEKRKDHSQFVQ 245          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A2D4BJK8_PYTIN (Chromatin assembly factor 1 subunit B-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJK8_PYTIN)

HSP 1 Score: 118 bits (296), Expect = 2.560e-27
Identity = 74/191 (38.74%), Postives = 96/191 (50.26%), Query Frame = 0
Query:    3 VDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            V TP+I WH G  G    +LSLD          G      ILAT G D E++LW V    +E  G+            F+ SL GHER VN VRFSPDGL LASASD  +V IW+    A     W  ++S  +  +T+L  G   DI D++WSP+S +L   S+D  + IW +         +DH  YVQ
Sbjct:   28 VTTPEIRWHCGPTGLNXAVLSLD-----FLHAHGDGADHAILATGGADKEIKLWRVRPDMKETEGL-----------EFIFSLTGHERSVNCVRFSPDGLFLASASDDMSVTIWTKPKTAGDDWRWDXITSFSDVTRTLLSCGHKGDITDLAWSPDSAFLCSVSVDNSSVIWNIEKGEVQERRKDHTQYVQ 202          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: K3XC86_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC86_GLOUD)

HSP 1 Score: 117 bits (294), Expect = 4.560e-27
Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 0
Query:    5 TPQICWHGGEAGKAAPILSLD-THPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            TP+I WH G  G    +LS+D  H         A  A  ILAT G D E++LW V+   ++  G+            F+ SL GH+R VN VRFSP+G+ LASASD  T+++W+    AA    W  ++S  +  +T+L  G   DI D++WSP+S +L   S+D  + IW           +DH  YVQ
Sbjct:   50 TPEIRWHCGPTGLNEAVLSIDFLHANGDKSKEDATKAPTILATGGADKEIKLWRVSYGLKDHTGL-----------EFIFSLSGHDRSVNCVRFSPNGVFLASASDDSTIILWTKPKTAAEDWAWDKITSFSDVSRTLLACGHKGDITDLAWSPDSAFLCSTSVDNTSVIWNAEKGEVEERRKDHTQYVQ 228          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A0P1B6K6_PLAHL (Chromatin assembly complex 1 subunit b cac2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B6K6_PLAHL)

HSP 1 Score: 117 bits (292), Expect = 7.720e-27
Identity = 75/191 (39.27%), Postives = 102/191 (53.40%), Query Frame = 0
Query:    3 VDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            V TP+I  H G  G    +LSLD   L  +     +  + +LAT G D E++LW V +    +A    Q  ++     FV SL GH+R VN VRFSP+G  LASASD  ++++WS    A     W  +SS  + K+ IL  G   DI D+SWSP+S +LA  S+D R  IW+V         +DH  YVQ
Sbjct:    6 VATPEIRLHCGPTGLNEAVLSLDF--LWPNNEVATSSGKSLLATGGADKEIKLWRVGEKEEPEA----QDTIA---LEFVFSLSGHDRSVNCVRFSPNGAYLASASDDTSIILWSKPKTAGDDWHWDQISSLSDVKRNILSLGHKGDITDLSWSPDSAFLASTSVDNRCVIWDVEKGDVAERRKDHTQYVQ 187          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A833SPU9_PHYIN (WD domain G-beta repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SPU9_PHYIN)

HSP 1 Score: 116 bits (291), Expect = 1.170e-26
Identity = 75/191 (39.27%), Postives = 99/191 (51.83%), Query Frame = 0
Query:    3 VDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            V TP+I  H G  G    +LSLD   L  +        + +LAT G D E++LW V +    +A         G +  FV SL GH+R VN VRFSP+G  LASASD  ++++WS    A     W  +SS  +  +TIL  G   DI D+SWSP+S +LA  S+D R  IW V         +DH  YVQ
Sbjct:    4 VATPEIRLHCGPTGLNEAVLSLDF--LRANTGEATTTDKPLLATGGADKEIKLWRVGESDNPEA-------KDGVVLEFVFSLSGHDRSVNCVRFSPNGSYLASASDDTSIILWSKPKTAGDDWRWDQISSLSDVGRTILSLGHKGDITDLSWSPDSDFLASSSVDNRCVIWNVEKGDVAERRKDHTQYVQ 185          
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A484E1D2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1D2_BRELC)

HSP 1 Score: 116 bits (290), Expect = 1.400e-26
Identity = 77/193 (39.90%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    3 VDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGA--RFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 188
            V+TP+I  H G  G    +LSLD     L Q +G      + ILAT G D E++LW +     ED    E   L      F+ SL GH+R +N VRFSP+G  LASASD  ++++W+    A     W  +SS     +TIL  G   DI D+SWSP+S +LA  S+D R  IW+V         +DHA YVQ
Sbjct:   10 VETPEIRLHCGPTGLNEAVLSLD----FLIQKAGKISLTDKPILATGGADKEIKLWRIG--CLEDTHNKEDVALE-----FIFSLSGHDRSINCVRFSPNGTYLASASDDTSIILWTKPKTAGDDWRWGQISSLSAVDRTILSLGHRGDITDLSWSPDSAFLASSSVDNRCVIWDVEKGEVAERRKDHAQYVQ 191          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ2_ECTSI1.360e-9879.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAR4_9STRA1.400e-3540.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
K8Z5F2_NANGC1.460e-3438.86Transducin wd40 domain-containing protein n=1 Tax=... [more]
A0A024TEX7_9STRA2.210e-3037.50Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024TCY2_9STRA5.390e-3037.50Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4BJK8_PYTIN2.560e-2738.74Chromatin assembly factor 1 subunit B-like protein... [more]
K3XC86_GLOUD4.560e-2736.84Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B6K6_PLAHL7.720e-2739.27Chromatin assembly complex 1 subunit b cac2 n=1 Ta... [more]
A0A833SPU9_PHYIN1.170e-2639.27WD domain G-beta repeat n=1 Tax=Phytophthora infes... [more]
A0A484E1D2_BRELC1.400e-2639.90Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 78..117
e-value: 2.8E-7
score: 40.2
coord: 131..170
e-value: 5.8E-6
score: 35.8
coord: 3..57
e-value: 140.0
score: 3.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 136..169
e-value: 7.2E-5
score: 23.5
coord: 82..117
e-value: 3.8E-5
score: 24.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 138..179
score: 12.58
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 85..120
score: 13.182
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 15..206
e-value: 1.0E-29
score: 106.0
NoneNo IPR availablePANTHERPTHR15271CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT Bcoord: 1..188
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 85..179
score: 18.457
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 43..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12318contigL-elsbetiae_contig12318:1010..3538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12318.1913.1mRNA_L-elsbetiae_contig12318.1913.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12318 57..3643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12318.1913.1 ID=prot_L-elsbetiae_contig12318.1913.1|Name=mRNA_L-elsbetiae_contig12318.1913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=208bp
MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTD
AEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPD
GLSLASASDGGTVVIWSVETLAAWSTLSSDRETKKTILRGATADIYDMSW
SPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQNPRMLSGFSSSS
GELSSST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf