mRNA_L-elsbetiae_contig12318.1913.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: D7FJJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ2_ECTSI) HSP 1 Score: 309 bits (791), Expect = 2.300e-93 Identity = 148/187 (79.14%), Postives = 167/187 (89.30%), Query Frame = 1 Query: 109 LVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 LVDTPQI WHGGEAGK APILSLDTHPL LD G G+R +LATAGTDAEVRLW+VN+PT+EDA WEQ G+S R+Q+FV+SLGGH+RGVN VRFSPDGLSLASASDGGTVVIWSVE +AAWST+ SDR+T+K ILRGAT DIYDM+WSP+S+Y+ CGSIDRRAH+WEV TKRSIATLEDHANYVQ Sbjct: 3 LVDTPQIVWHGGEAGKNAPILSLDTHPLALD--GGHQGSRVVLATAGTDAEVRLWIVNRPTQEDAKNWEQAGVSSRLQTFVASLGGHQRGVNAVRFSPDGLSLASASDGGTVVIWSVEDVAAWSTIKSDRDTRKNILRGATEDIYDMAWSPDSKYITCGSIDRRAHVWEVATKRSIATLEDHANYVQ 187
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A836CAR4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR4_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.060e-32 Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 106 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPS---------GAAGA-----RFILATAGTDAEVRLWVVNQPTREDAGVWEQPG---LSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 MLVDTPQI WH GEA K PI S D HP L Q + A+ A +++ATAG EV L+ V P D W+ P S R+Q F+++L GH+ VNV RFSP GL LA+A D GTV++WSV + W T + + L ++ +YD++W+P SR LA ID+ +W+ ++ AT +DH +VQ Sbjct: 1 MLVDTPQIIWHAGEANKNVPIYSCDIHPSPLPQSTDRRSKHGDPAASDATDNATEYVMATAGIANEVHLFAVKAPGLADPR-WDVPDGGTASVRLQRFLTALSGHDCVVNVARFSPHGLCLATAGDNGTVIVWSVASAGDWGT--EGLKPSRYSLNASSMGVYDLAWAPGSRLLASVGIDKTMRVWDCVARQCAATAQDHKQFVQ 202
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: K8Z5F2_NANGC (Transducin wd40 domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5F2_NANGC) HSP 1 Score: 138 bits (347), Expect = 2.120e-31 Identity = 75/193 (38.86%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 106 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSV---ETLAAWSTLSSDRETKKTILRGATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRS--IATLEDHANYVQ 669 M + TPQI WHGGEAGK P+LS D HP +LAT G DAEVRLW+++ E++ + Q ++ + H+R VN VRFSPDG +LA+ASDGG + ++ + W R ++R +DIYD++WSP SR L S+D + +W+VT ++S ++T H+NYVQ Sbjct: 1 MKITTPQITWHGGEAGKNDPVLSADVHPC------------GVLATGGADAEVRLWLLHLDENEES----------KFQDYLYNFENHQRSVNSVRFSPDGRALATASDGGVIFVYLLPPGRPTRFWRRPMCQRMVLCRLVRTTQSDIYDLAWSPSSRELCSVSVDSKVAVWDVTGEKSPLLSTFTSHSNYVQ 171
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A024TEX7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEX7_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.250e-27 Identity = 85/229 (37.12%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 91 TKLRDMLVDTPQICWHGGEAGKAAPILSLD--------------------THPLVLDQPSGAAGAR-------FILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWS-----VETLAA---WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 T+ M VDTP+I WH G G +L++D + P+ D PS ++ + +LATAG+D EVRLW++ PT + V FV +L H+R VN VRFSPDG LASASD T+V+WS V+ A+ WST++S+ + + +L G DI D+SWSP+S+YL S+D A IW V T + I +DH+ +VQ Sbjct: 31 TRGGGMRVDTPEIRWHYGPTGLNEAVLTIDYLRRPILPSAATGGEIDTMSSTPVAADVPSSSSRSTPQQTSLPTVLATAGSDKEVRLWIM--PTDDPLPV------------FVYTLSAHDRSVNCVRFSPDGSILASASDDSTIVLWSRPKHLVDDDASSWDWSTVASNSDVGRVLLACGHKGDITDLSWSPDSQYLCSVSVDNTASIWHVPTAKLIEKRKDHSQFVQ 245
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A024TCY2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCY2_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.560e-27 Identity = 85/229 (37.12%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 91 TKLRDMLVDTPQICWHGGEAGKAAPILSLD--------------------THPLVLDQPSGAAGAR-------FILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWS-----VETLAA---WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 T+ M VDTP+I WH G G +L++D + P+ D PS ++ + +LATAG+D EVRLW++ PT + V FV +L H+R VN VRFSPDG LASASD T+V+WS V+ A+ WST++S+ + + +L G DI D+SWSP+S+YL S+D A IW V T + I +DH+ +VQ Sbjct: 31 TRGGGMRVDTPEIRWHYGPTGLNEAVLTIDYLRRPILPSAATGGEIDTMSSTPVAADVPSSSSRSTPQQTSLPTVLATAGSDKEVRLWIM--PTDDPLPV------------FVYTLSAHDRSVNCVRFSPDGSILASASDDSTIVLWSRPKHLVDDDASSWDWSTVASNSDVGRVLLACGHKGDITDLSWSPDSQYLCSVSVDNTASIWHVPTAKLIEKRKDHSQFVQ 245
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A3R6YJP8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YJP8_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.720e-25 Identity = 82/219 (37.44%), Postives = 114/219 (52.05%), Query Frame = 1 Query: 106 MLVDTPQICWHGGEAGKAAPILSLD-----------THPLVLDQPSGA------AGARF------ILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIW-------SVETLAAWSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 M VDTP+I WH G G +LS+D + LV SG+ AG+ +LAT G+D EVRLW++ P + V FV +L H+R VN VRFSPDG LASASD T+V+W + + L WST++S+ + + +L G DI D+SWSP+S+YL S+D A IW V T + + +DH+ +VQ Sbjct: 1 MKVDTPEIRWHYGPTGLNEAVLSIDYLRRPSSSPDASGELVDTSSSGSVNGTASAGSATPPVLPSVLATGGSDKEVRLWIM--PVDDPLPV------------FVYTLSAHDRSVNCVRFSPDGSILASASDDSTIVLWMRPKHVSNDDALWDWSTVASNSDVGRVLLACGHKGDITDLSWSPDSQYLCSVSVDNTASIWHVPTAKLVEKRKDHSQFVQ 205
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: K3XC86_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC86_GLOUD) HSP 1 Score: 118 bits (296), Expect = 1.780e-24 Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 91 TKLRDMLVDTPQICWHGGEAGKAAPILSLD-THPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 TK + TP+I WH G G +LS+D H A A ILAT G D E++LW V+ ++ G+ F+ SL GH+R VN VRFSP+G+ LASASD T+++W+ AA W ++S + +T+L G DI D++WSP+S +L S+D + IW +DH YVQ Sbjct: 41 TKPTLLTALTPEIRWHCGPTGLNEAVLSIDFLHANGDKSKEDATKAPTILATGGADKEIKLWRVSYGLKDHTGL-----------EFIFSLSGHDRSVNCVRFSPNGVFLASASDDSTIILWTKPKTAAEDWAWDKITSFSDVSRTLLACGHKGDITDLAWSPDSAFLCSTSVDNTSVIWNAEKGEVEERRKDHTQYVQ 228
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A2D4BJK8_PYTIN (Chromatin assembly factor 1 subunit B-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJK8_PYTIN) HSP 1 Score: 118 bits (296), Expect = 1.910e-24 Identity = 74/193 (38.34%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 106 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 + V TP+I WH G G +LSLD G ILAT G D E++LW V +E G+ F+ SL GHER VN VRFSPDGL LASASD +V IW+ A W ++S + +T+L G DI D++WSP+S +L S+D + IW + +DH YVQ Sbjct: 26 VRVTTPEIRWHCGPTGLNXAVLSLD-----FLHAHGDGADHAILATGGADKEIKLWRVRPDMKETEGL-----------EFIFSLTGHERSVNCVRFSPDGLFLASASDDMSVTIWTKPKTAGDDWRWDXITSFSDVTRTLLSCGHKGDITDLAWSPDSAFLCSVSVDNSSVIWNIEKGEVQERRKDHTQYVQ 202
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A0P1B6K6_PLAHL (Chromatin assembly complex 1 subunit b cac2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B6K6_PLAHL) HSP 1 Score: 117 bits (293), Expect = 3.700e-24 Identity = 75/196 (38.27%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 97 LRDMLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 + + V TP+I H G G +LSLD L + + + +LAT G D E++LW V + +A Q ++ FV SL GH+R VN VRFSP+G LASASD ++++WS A W +SS + K+ IL G DI D+SWSP+S +LA S+D R IW+V +DH YVQ Sbjct: 1 MPSVRVATPEIRLHCGPTGLNEAVLSLDF--LWPNNEVATSSGKSLLATGGADKEIKLWRVGEKEEPEA----QDTIA---LEFVFSLSGHDRSVNCVRFSPNGAYLASASDDTSIILWSKPKTAGDDWHWDQISSLSDVKRNILSLGHKGDITDLSWSPDSAFLASTSVDNRCVIWDVEKGDVAERRKDHTQYVQ 187
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Match: A0A484E1D2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1D2_BRELC) HSP 1 Score: 116 bits (290), Expect = 8.510e-24 Identity = 77/195 (39.49%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 106 MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGA--RFILATAGTDAEVRLWVVNQPTREDAGVWEQPGLSGRMQSFVSSLGGHERGVNVVRFSPDGLSLASASDGGTVVIWSVETLAA----WSTLSSDRETKKTILR-GATADIYDMSWSPESRYLACGSIDRRAHIWEVTTKRSIATLEDHANYVQ 669 + V+TP+I H G G +LSLD L Q +G + ILAT G D E++LW + ED E L F+ SL GH+R +N VRFSP+G LASASD ++++W+ A W +SS +TIL G DI D+SWSP+S +LA S+D R IW+V +DHA YVQ Sbjct: 8 VRVETPEIRLHCGPTGLNEAVLSLD----FLIQKAGKISLTDKPILATGGADKEIKLWRIG--CLEDTHNKEDVALE-----FIFSLSGHDRSINCVRFSPNGTYLASASDDTSIILWTKPKTAGDDWRWGQISSLSAVDRTILSLGHRGDITDLSWSPDSAFLASSSVDNRCVIWDVEKGEVAERRKDHAQYVQ 191 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12318.1913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12318.1913.1 >prot_L-elsbetiae_contig12318.1913.1 ID=prot_L-elsbetiae_contig12318.1913.1|Name=mRNA_L-elsbetiae_contig12318.1913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=208bp MLVDTPQICWHGGEAGKAAPILSLDTHPLVLDQPSGAAGARFILATAGTDback to top mRNA from alignment at L-elsbetiae_contig12318:57..3643- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12318.1913.1 ID=mRNA_L-elsbetiae_contig12318.1913.1|Name=mRNA_L-elsbetiae_contig12318.1913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3587bp|location=Sequence derived from alignment at L-elsbetiae_contig12318:57..3643- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12318:57..3643- >mRNA_L-elsbetiae_contig12318.1913.1 ID=mRNA_L-elsbetiae_contig12318.1913.1|Name=mRNA_L-elsbetiae_contig12318.1913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1248bp|location=Sequence derived from alignment at L-elsbetiae_contig12318:57..3643- (Laminarionema elsbetiae ELsaHSoW15)back to top |