prot_L-elsbetiae_contig12315.1912.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12315.1912.1
Unique Nameprot_L-elsbetiae_contig12315.1912.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
BLAST of mRNA_L-elsbetiae_contig12315.1912.1 vs. uniprot
Match: D7G5U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.840e-37
Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 MVEFDEDSPSFRRKVEALDRNVEGLRGQLQQLVIVARKYCGTGLALCDHGRELAGVLMNQRGESWFTRLGFLAPELESLG 80
            ++EF EDSP+FRRKVE LD NVEGLRGQLQQLV VARKYCG GLA C+HGRELAGVLMN RGESWFTRLG LAP LE LG
Sbjct:  286 VMEFGEDSPAFRRKVETLDSNVEGLRGQLQQLVAVARKYCGNGLAFCEHGRELAGVLMNPRGESWFTRLGALAPALEELG 365          
BLAST of mRNA_L-elsbetiae_contig12315.1912.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 5.120e-36
Identity = 66/79 (83.54%), Postives = 69/79 (87.34%), Query Frame = 0
Query:    2 VEFDEDSPSFRRKVEALDRNVEGLRGQLQQLVIVARKYCGTGLALCDHGRELAGVLMNQRGESWFTRLGFLAPELESLG 80
            +EF EDSP+FRRKVE LD NVEGLRGQLQQLV VARKYCG GLA C+HGRELAGVLMN RGESWFTRLG LAP LE LG
Sbjct:    1 MEFGEDSPAFRRKVETLDSNVEGLRGQLQQLVAVARKYCGNGLAFCEHGRELAGVLMNPRGESWFTRLGALAPALEELG 79          
BLAST of mRNA_L-elsbetiae_contig12315.1912.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.490e-14
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 0
Query:    1 MVEFDEDSPSFRRKVEALDRNVEGLRGQLQQLVIVARKYCGTGLALCDHGRELAGVLMNQR----------------------------GESWFTRLGFLAPELESLG 80
            ++E++EDSPSFRRK++ALD NVEG+R  LQ+LV + +KY   G+A    GR  A  LM+ +                            GESWF+RLG LAP L   G
Sbjct:  301 VLEYEEDSPSFRRKLQALDENVEGMRKHLQRLVDIVQKYIEAGVAFSAVGRIFASELMHLQEGKASGKSGTGXXXXXXXXXXGLSQQGGGESWFSRLGDLAPALVRFG 408          
BLAST of mRNA_L-elsbetiae_contig12315.1912.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 3.600e-5
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    1 MVEFDEDSPSFRRKVEALDRNVEGLRGQLQQL 32
            ++EF EDSPSFRRKVE LD+NV GLRG  QQL
Sbjct:  258 IIEFAEDSPSFRRKVETLDQNVIGLRGHQQQL 289          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12315.1912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5U9_ECTSI1.840e-3782.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2J8_9PHAE5.120e-3683.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CVE4_9STRA5.490e-1440.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835ZCL2_9STRA3.600e-575.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 3..77
e-value: 7.4E-7
score: 31.1
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 3..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12315contigL-elsbetiae_contig12315:2583..3965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12315.1912.1mRNA_L-elsbetiae_contig12315.1912.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12315 2556..3965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12315.1912.1 ID=prot_L-elsbetiae_contig12315.1912.1|Name=mRNA_L-elsbetiae_contig12315.1912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
MVEFDEDSPSFRRKVEALDRNVEGLRGQLQQLVIVARKYCGTGLALCDHG
RELAGVLMNQRGESWFTRLGFLAPELESLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf