prot_L-elsbetiae_contig12307.1908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12307.1908.1
Unique Nameprot_L-elsbetiae_contig12307.1908.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
BLAST of mRNA_L-elsbetiae_contig12307.1908.1 vs. uniprot
Match: A0A6H5KWW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW8_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 2.920e-95
Identity = 159/192 (82.81%), Postives = 169/192 (88.02%), Query Frame = 0
Query:   40 DSDFLFEQKLESVRAALLCGAVGAASRLLAVGAGVLIPGTFLREALAAPEPAAASVLFGLAAGFSQGALFGLTYRYVVRSDRETPSASGTPDRPTTPVPQMDGFTVGHLGDGAVAAFALTSALGQSEVPLTLAAGEFVGVLGRGGGIVEALGAVLLPAAPFLPRVAGDLFVYSAARAALDRALDRGAIKPFP 231
            DSDFLFEQKLESVRAA+LCG+VGA SRLLAVGAG L+PG   REALAAPEPA +S+LFGLAAGF+QGALFGLTYRYVVRSDRE  S S T   P  PVPQMDGFTVGHLGDG VAAFALTSALGQSE PLTLAAGEFVGVLGRGGGI+EAL AVLLPAAPFLPR A DLF+Y+AAR A+DRALD G IKPFP
Sbjct:  162 DSDFLFEQKLESVRAAVLCGSVGATSRLLAVGAGGLLPGGLFREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQ-SPSATTGEP--PVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVGVLGRGGGILEALAAVLLPAAPFLPRAAADLFLYTAARLAIDRALDEGVIKPFP 350          
BLAST of mRNA_L-elsbetiae_contig12307.1908.1 vs. uniprot
Match: D8LP08_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP08_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 5.130e-85
Identity = 148/186 (79.57%), Postives = 158/186 (84.95%), Query Frame = 0
Query:   40 DSDFLFEQKLESVRAALLCGAVGAASRLLAVGAGVLIPGTFLREALAAPEPAAASVLFGLAAGFSQGALFGLTYRYVVRSDRETPSASGTPDRPTTPVPQMDGFTVGHLGDGAVAAFALTSALGQSEVPLTLAAGEFVGVLGRGGGIVEALGAVLLPAAPFLPRVAGDLFVYSAARAALDRALDRG 225
            DSDFLFEQKLESVRAA+LCG+VGAASRLLAVGAG L+PG  LREALAAPEPA +S+LFGLAAGF+QGALFGLTYRYVVRSDRE  S S T   P  PVPQMDGFTVGHLGDG VAAFALTSALGQSE PLTLAAGEFV VL RGGGI+EAL AVLLPAAPFLPR A DLF+YS+   A   +  RG
Sbjct:   70 DSDFLFEQKLESVRAAVLCGSVGAASRLLAVGAGALLPGGLLREALAAPEPAGSSLLFGLAAGFAQGALFGLTYRYVVRSDREQ-SPSATTGEP--PVPQMDGFTVGHLGDGCVAAFALTSALGQSEAPLTLAAGEFVRVLWRGGGILEALAAVLLPAAPFLPRAAADLFLYSSPPLAPPTSSPRG 252          
BLAST of mRNA_L-elsbetiae_contig12307.1908.1 vs. uniprot
Match: A0A7S2XV80_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV80_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.570e-6
Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 0
Query:   47 QKLESVRAALLCGAVGAASRLLAVGAGVLIPGTFLREALAAPEPAAASVLFGLAAGFSQGALFGLTYRYVVRSDRETPSASGTPDRPTTPVPQMDGFTVGHLGDGAVAAFALTSALGQSEVPLTLAAGEFVGVLGRGGGIVEALGAVLLPAAPFLPRVAGDLFVYSAARAALDRALDRGAIKP 229
            Q++ES+++A++ GA    +RL         P   + +         + V+  + +   +GALFGL YRYV+RSD + P                  F+   LG GA AAFALTS L  +E  L+    +F+ +  +  G    LG  L+ +A      A     +  A+  +D  LD G I P
Sbjct:   93 QRIESLKSAVVGGAAVGGTRLALTVLDGTKPWNMVNDV-----DTLSRVIVEVGSATLEGALFGLLYRYVIRSDMKKPKDELV-------------FSADQLGGGAAAAFALTSFLPANEERLSRILSDFLSLALQLDGKQADLGTTLMESAYTSGSFALSFIGFLVAKITIDSCLDAGIISP 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12307.1908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWW8_9PHAE2.920e-9582.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP08_ECTSI5.130e-8579.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2XV80_9STRA1.570e-628.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..53
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12307contigL-elsbetiae_contig12307:482..2188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12307.1908.1mRNA_L-elsbetiae_contig12307.1908.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12307 482..3415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12307.1908.1 ID=prot_L-elsbetiae_contig12307.1908.1|Name=mRNA_L-elsbetiae_contig12307.1908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
MFRPQQARPSAPAPPPAAPAALREEAAQASRRRRQRRHHDSDFLFEQKLE
SVRAALLCGAVGAASRLLAVGAGVLIPGTFLREALAAPEPAAASVLFGLA
AGFSQGALFGLTYRYVVRSDRETPSASGTPDRPTTPVPQMDGFTVGHLGD
GAVAAFALTSALGQSEVPLTLAAGEFVGVLGRGGGIVEALGAVLLPAAPF
LPRVAGDLFVYSAARAALDRALDRGAIKPFP*
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