prot_L-elsbetiae_contig12295.1896.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12295.1896.1
Unique Nameprot_L-elsbetiae_contig12295.1896.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length340
Homology
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BLAST of mRNA_L-elsbetiae_contig12295.1896.1 vs. uniprot
Match: A0A6H5L4P0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P0_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 4.560e-33
Identity = 84/159 (52.83%), Postives = 98/159 (61.64%), Query Frame = 0 
Query:   41 MDADYVMGTEEWQAATSTISTTTRA-IPASAWRTPLARHLKLRNFLE------GDSGXXXXXXXXXXXXXKDLLEEKNDE--YESRGCT--HPLHVAASQNILKLGSLLLSGTARTPVDPDVRDGSGKTALHWAAMTDRAGFVLLLLESGAAVDTTDSQ 188
            MD + VM +++W  ATS ISTTT + IPA AWRTPLARHLKL +FLE      G+S            XX        D+   +  G    HPLHVAASQNILKLG +LLS  A   VDP+VRDGSG+T LHWAAMT R  F LLLLES A +D  D +
Sbjct:   26 MDVEDVMRSQDWVKATSAISTTTSSGIPARAWRTPLARHLKLVSFLEAGDGCNGNSNINNNSNRVSRDXXXXXXXXXXDDCLLDEEGTMRHHPLHVAASQNILKLGRVLLSPAAAASVDPNVRDGSGRTPLHWAAMTGRVDFALLLLESDAKLDAVDRE 184
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BLAST of mRNA_L-elsbetiae_contig12295.1896.1 vs. uniprot
Match: D7G1Y0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y0_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 9.300e-21
Identity = 49/68 (72.06%), Postives = 54/68 (79.41%), Query Frame = 0 
Query:  121 HPLHVAASQNILKLGSLLLSGTARTPVDPDVRDGSGKTALHWAAMTDRAGFVLLLLESGAAVDTTDSQ 188
            HPLHVAASQNILKLG++LLS  A   VDP VRDGSG+T LHWAAMT RA F LLLLESGA +D  D +
Sbjct:    4 HPLHVAASQNILKLGTVLLSPAAAASVDPCVRDGSGRTPLHWAAMTGRADFALLLLESGAKLDAVDRE 71
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BLAST of mRNA_L-elsbetiae_contig12295.1896.1 vs. uniprot
Match: A0A2T3AKG0_9PEZI (Uncharacterized protein n=1 Tax=Coniella lustricola TaxID=2025994 RepID=A0A2T3AKG0_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 1.870e-5
Identity = 37/92 (40.22%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:  106 LLEEKNDEYESRGCTH--PLHVAASQNILKLGSLLLSGTARTPVDPDVRDGSGKTALHWA-AMTDRAGFVLLLLESGAAVDTTDSQSRTPLL 194
            LL +K  +   R  T   PLH   +  +L     LLSG      DP+     GKTALH A A+++R  FV LLLE GA  D T     TPL+
Sbjct:  184 LLLQKGADPNLRDSTRRSPLHWTVTNGLLDFARCLLSGAYGIKADPNAAQNRGKTALHLASALSNRLDFVALLLEHGAYADATSDGRWTPLI 275
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12295.1896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4P0_9PHAE4.560e-3352.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1Y0_ECTSI9.300e-2172.06Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A2T3AKG0_9PEZI1.870e-540.22Uncharacterized protein n=1 Tax=Coniella lustricol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 254..284
e-value: 3300.0
score: 1.1
coord: 155..184
e-value: 0.01
score: 25.0
coord: 188..217
e-value: 2600.0
score: 2.0
coord: 221..250
e-value: 3.0E-4
score: 30.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 155..187
score: 12.262
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 221..253
score: 13.838
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 188..249
e-value: 6.1E-8
score: 33.1
coord: 120..186
e-value: 3.9E-7
score: 30.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 122..274
score: 37.533
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 104..191
e-value: 2.8E-14
score: 54.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 192..298
e-value: 1.9E-23
score: 84.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 121..271
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 116..216
coord: 153..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12295contigL-elsbetiae_contig12295:539..2766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12295.1896.1mRNA_L-elsbetiae_contig12295.1896.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12295 539..2766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12295.1896.1 ID=prot_L-elsbetiae_contig12295.1896.1|Name=mRNA_L-elsbetiae_contig12295.1896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
QSPVRSCEVITYMPFAPSDHIRRFRRREKTSRLHQREGQTMDADYVMGTE
EWQAATSTISTTTRAIPASAWRTPLARHLKLRNFLEGDSGGGGGSIIGSG
GGGKDLLEEKNDEYESRGCTHPLHVAASQNILKLGSLLLSGTARTPVDPD
VRDGSGKTALHWAAMTDRAGFVLLLLESGAAVDTTDSQSRTPLLCSSAFG
ATAAVRLLLRWGAAASRAARGGLTPLHGAASGGHVEVAEVLVEAGADVHG
RTEMGAKPRHLAERHGHAGVVRALSLAASRQPSLSSASACTSIAAAEDDD
DGLWDGSGGGARGGGGGGGGGGAGGGAYDDRREEVLAQHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf