prot_L-elsbetiae_contig1228.1884.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1228.1884.1
Unique Nameprot_L-elsbetiae_contig1228.1884.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length267
Homology
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: D8LJV1_ECTSI (Similar to Cell growth regulator with RING finger domain 1 (Cell growth regulatory gene 19 protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.110e-55
Identity = 104/205 (50.73%), Postives = 122/205 (59.51%), Query Frame = 0
Query:    1 MRGIAP-VGSWTRHWDPSSEHYFYYERSTGQTRWARPEFPAEVFDSPLAHQRSADDTMLEGVVLHQARDSDPHSSQGYAQQHQEDAMFHRKQQRDDGLPIRKKRGASKD---TNRIYTDAQLNITE-----EPRKDYISIAKEYSITAPFRDTSGKQTCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGGSLCPVC 196
            M G AP VGSWT+HWDPSS+ +FYY+ STGQT W R   P E     L  +R  +  +LEG+ L QA+++        AQ H             D  P R+KRG SKD    NR++ D  L   E     EPRKDYIS AKEY +TAPFRDT GKQ CVICQ RKAS V FPCEHKC C RCI+  GFG     S+  +LCPVC
Sbjct:    1 MSGSAPAVGSWTKHWDPSSKQHFYYDPSTGQTTWGR-SVPPEKSTESL--KREGEGNLLEGIFLQQAKET--------AQHH-------------DVRPRRRKRGVSKDRKNNNRVFADDDLPQNETIEDDEPRKDYISFAKEYYLTAPFRDTGGKQICVICQKRKASAVLFPCEHKCVCARCIESEGFGAMRKASEREALCPVC 181          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A6H5JCM1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM1_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 7.340e-45
Identity = 90/189 (47.62%), Postives = 113/189 (59.79%), Query Frame = 0
Query:   17 SSEHYFYYERSTGQTRWARPEFPAEVFDSPLAHQRSADDTMLEGVVLHQARDSDPHSSQGYAQQHQEDAMFHRKQQRDDGLPIRKKRGASKD----TNRIYTDAQLNITE-----EPRKDYISIAKEYSITAPFRDTSGKQTCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGGSLCPVC 196
            +S+ +FYY+ S+GQT W RP  P++  DS    +R  + T+LEG+ L QA+++        AQ H             D  P R+KRG SKD     NR++ D   +  E     EP KDYIS AKEY +TAPFRDT GKQTCVICQ RKAS V FPCEHKC C RCI++ GFG     S+  +LCPVC
Sbjct:   18 TSQQHFYYDPSSGQTMWGRPIPPSKSTDSL---KREGEGTLLEGIFLQQAKET--------AQHH-------------DVRPWRRKRGGSKDRKNNNNRVFADDGQHQNETIEDDEPCKDYISFAKEYYLTAPFRDTGGKQTCVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC 182          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A7S2C0Y4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0Y4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.690e-23
Identity = 76/246 (30.89%), Postives = 112/246 (45.53%), Query Frame = 0
Query:    9 SWTRHWDPSSEHYFYYERSTGQTRWARPEFPAEVFDSPLAHQRSADDTMLEGVVLHQARDSDPHSSQGYAQQHQEDAMFHRKQQRDDGLPIRKKRGASKDTNRIYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQTCVICQNRKASGVFFPCEHKCACRRC------IDQGGFGKPGAVSKGG----SLCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILLEI 244
            +WT+H D +S H ++Y  +TG T+W  P   A +   P  H             L  +R   P      AQ H + A+      +   +P    R A  +     T   +   E   KDY S+A+EY+    +R+  G Q C++C    ++ V FPC HKC C  C      +D   + K  A   GG    S CP+C +++  ++   G   E E YW+WV EVKPPLPR F  KF  A + + +
Sbjct:   65 NWTQHHDDASGHDYFYNDATGVTQWEPPVADA-LASVPQPH-------------LPASRQPQPR-----AQAHPQPALC-----QPSLVPSAASRPAVAEPKLTATSETI---EPLNKDYASMAREYAQFKAYRNLDGDQFCLLCHKAPSTYVLFPCGHKCICEGCKKSNGVVDSATWQKAMANPNGGGELWSFCPLCNEEIKRISKHTG--TEYEDYWKWVNEVKPPLPRGFKTKFKSAHVEVRV 281          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A835Z103_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z103_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.730e-20
Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 0
Query:  112 IYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQTCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGG---SLCPVCCQQVVFVAPCKGGKKETELYWRWVEEVK 224
            +Y + +    +EP K+Y+ +A+EY +TAP+RD  G+        ++A  VFFPC HKC C +C+ Q  +   GA   G    ++CPVC +Q+ F++    GK E + YW+W++ V+
Sbjct:    7 VYVEGE---EDEPVKNYMQMAQEYHVTAPYRDLKGRA-------KEARMVFFPCGHKCMCEKCVMQHKYSCAGATDAGEDSWTMCPVCAEQIKFMSLFIDGKTEVQRYWQWIDAVE 112          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A7S2S490_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S490_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.830e-20
Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 0
Query:   98 PIRKKRGASKDTNRIYT-DAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQTCVICQNRKASGVFFPCEHKCACRRCIDQGGF--GKPGAVSKGG-SLCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILLEIKSEPD 249
            P R+KR A K +++     A+LN      KDY+S+A+EY+ + P+R+ SG Q C++C  R +  V FPC HKC C  C     F       + +G    CP+C +++  + P  G   E   YW WV EVKP LP  F  +   ++ +LE  S P+
Sbjct:   72 PKRQKRRAGKSSSQNNAPQARLN------KDYLSMAREYTQSEPYRNLSGAQPCLVCGTRASELVLFPCAHKCLCTACAKSQHFVESSRAKLEEGAWCFCPLCNEEIKRILPHTG--TEVADYWTWVHEVKPVLPGGFRSRLSQSSQMLEHGSIPN 219          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A1W0A713_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A713_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.730e-14
Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = 0
Query:  107 KDTNRIYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQ-----TCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKP--GAVSKGGS---LCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILL 242
            K+   +  +A    ++    DY++   +Y++  P+   + K       C +C+  K   VFFPCEHKCAC +C+   G+  P     SKG S    CP+C Q V+ +     G+ E + YW+W  EV P LP  F   F  A   L
Sbjct:   83 KEKKLLSNEALRRQSKSMTADYMTDLDKYNMAKPYSRRANKTFEPSVLCAVCKMNKCEMVFFPCEHKCACNKCL---GYQPPVIKTPSKGISWLHACPICFQDVIIMFEDSNGE-EIDFYWKWGGEVTPQLPTKFVSTFKRAGSKL 224          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A1V9Z5I3_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5I3_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.270e-11
Identity = 49/171 (28.65%), Postives = 73/171 (42.69%), Query Frame = 0
Query:  112 IYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQ-----TCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGGS------LCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILL------------EIKSEPDSHKTWDKPPT 259
            I   A    ++    DY+S  + Y++  P+     K       C++C+  K + VFFPCEHKC C +C+D     +P      G        CPVC + V  +    G   ETELYW+  ++  P LPR+F   F      L            E+ +  +   T D+P T
Sbjct:   98 IKLQALRRQSQSMTTDYMSDVEMYNMAKPYSRRPDKTFDPTAVCIVCKTNKITMVFFPCEHKCLCNKCLDY----RPPVTQIAGKGAQWPHACPVCYRDVSVMFENTG--HETELYWK--QDEVPRLPRNFVATFKRTGSRLNTAPSMVFPTLDELSTHEEVDATDDRPKT 260          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: T0S352_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S352_SAPDV)

HSP 1 Score: 67.0 bits (162), Expect = 2.710e-9
Identity = 54/176 (30.68%), Postives = 79/176 (44.89%), Query Frame = 0
Query:   83 EDAMFHRKQQRDDGLPIRKKRGASKDTNRIYTDAQLNITEEPRK------DYISIAKEYSITAPFRDTSGKQ-----TCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKP--GAVSKGGS---LCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILL 242
            +D +  R++  +D  PI + R     T     + QL +    R+      DYI+    Y+   PF   S K       C++C+ +K   VFFPCEHKC C +C+D   +  P    + KG      CPVC + V  +    G   E + YW+ ++EV P LP  F   F  A   L
Sbjct:   66 DDLISSRRRNSEDEQPIPELRSTPLATALSEKEKQLKLQALRRQSQSMTTDYITDIDRYNSAKPFSRRSDKTFDPEARCIMCKTQKILMVFFPCEHKCVCNKCLD---YHPPVTKTIGKGAHWPHACPVCYRDVTVMFENTGF--EVDHYWK-LDEV-PHLPNSFVTSFKRAGSRL 234          
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Match: A0A067CQV5_SAPPC (RING-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQV5_SAPPC)

HSP 1 Score: 60.5 bits (145), Expect = 4.700e-7
Identity = 43/142 (30.28%), Postives = 60/142 (42.25%), Query Frame = 0
Query:  112 IYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQ-----TCVICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGGS------LCPVCCQQVVFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILL 242
            I  +A    ++    DYIS  + Y+   PF     K       C++C+  K   VFFPCEHKC C +C++      P      G        CPVC + V  +    G   E + YW+ ++EV P L   F   F  A   L
Sbjct:   95 IKFEALRRQSQSMTTDYISDVERYNSAKPFSRRPDKTFDPEARCIMCKTHKIHMVFFPCEHKCVCNKCLEY----HPPVTKIAGKGAHWPHACPVCYRDVTIMFENTGF--EVDHYWK-LDEV-PHLSNSFVTTFKRAGSRL 228          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1228.1884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LJV1_ECTSI8.110e-5550.73Similar to Cell growth regulator with RING finger ... [more]
A0A6H5JCM1_9PHAE7.340e-4547.62RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2C0Y4_9STRA1.690e-2330.89Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
A0A835Z103_9STRA3.730e-2036.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S490_9STRA3.830e-2035.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A713_9STRA3.730e-1432.19Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9Z5I3_9STRA4.270e-1128.65RING-type domain-containing protein n=1 Tax=Achlya... [more]
T0S352_SAPDV2.710e-930.68Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CQV5_SAPPC4.700e-730.28RING-type domain-containing protein n=1 Tax=Saprol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 5..38
e-value: 0.0031
score: 26.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 10..36
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 10..38
score: 9.773
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 150..196
e-value: 0.0015
score: 27.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 150..196
score: 9.922
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 129..204
e-value: 1.9E-10
score: 42.0
NoneNo IPR availableGENE3D2.20.70.10coord: 4..45
e-value: 1.1E-6
score: 30.0
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 138..201
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 9..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1228contigL-elsbetiae_contig1228:20291..22304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1228.1884.1mRNA_L-elsbetiae_contig1228.1884.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1228 20291..22304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1228.1884.1 ID=prot_L-elsbetiae_contig1228.1884.1|Name=mRNA_L-elsbetiae_contig1228.1884.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
MRGIAPVGSWTRHWDPSSEHYFYYERSTGQTRWARPEFPAEVFDSPLAHQ
RSADDTMLEGVVLHQARDSDPHSSQGYAQQHQEDAMFHRKQQRDDGLPIR
KKRGASKDTNRIYTDAQLNITEEPRKDYISIAKEYSITAPFRDTSGKQTC
VICQNRKASGVFFPCEHKCACRRCIDQGGFGKPGAVSKGGSLCPVCCQQV
VFVAPCKGGKKETELYWRWVEEVKPPLPRDFPHKFHMAAILLEIKSEPDS
HKTWDKPPTSECCILS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR036020WW_dom_sf