prot_L-elsbetiae_contig12228.1850.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12228.1850.1
Unique Name	prot_L-elsbetiae_contig12228.1850.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	303

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: D7FRU7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU7_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.120e-82
Identity = 188/290 (64.83%), Postives = 207/290 (71.38%), Query Frame = 0

Query:    1 MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAALREEIRRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKR-------IADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPEN--DGGKGG----GTNGHRPAV---PSSTSTGET-------TPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIED 267
            MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEA LREEIR LK SA AQRP  +RQ PDD      E + E+LARTTQELEELR EN +LRK+       P   R D  + S   +  K        +A D+ + AAL++RCEALLGERKAMQTIMEQKVQVLVDNVADSACAVL+LVA  ++  D  +GG    G+  H   V   PSS   G T          AG   SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED
Sbjct:  256 MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSSALAQRPLTERQGPDD------EVATEVLARTTQELEELRCENAELRKQIL----SPALRREDANSMSENREAGKEGEDDRSSVAHDSAQEAALQDRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLDLVAASQSGIDNRRGGDGHTGSTDHAQVVLPSPSSAPAGGTGSTGEGEVSRAGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAED 535

[Close]

BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 2.950e-43
Identity = 152/340 (44.71%), Postives = 177/340 (52.06%), Query Frame = 0

Query:    1 MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAALREEIRRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADD-------NGRGAALKNRCEALLGERKAMQ----------------------------------------------TIMEQKVQVLVDNVADSACAVLNLVAVPENDG-------GKGGGTNGHRPAVPS----------STSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIEDDLR 270
            MEYLLREKLERLVQSEIEARVARMHQ      I    +DG+                 +   + SA  QRP  +RQ P+D      E + E+LARTTQELEELR EN +LRK+       P   R D    S   +  K   DD       + + AAL+NRCEALLGERKAMQ                                              TIMEQKV+VLVDNVADSACAVL+LVA  ++         G  G T+  +  +PS          S + GE +  AG   SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED  R
Sbjct: 1198 MEYLLREKLERLVQSEIEARVARMHQI-----ICGVLIDGV-----------------LEHAQHSALTQRPLTERQGPED------EIATEVLARTTQELEELRCENAELRKQML----APALRREDANTISENREAGKEGEDDRSSVAHGSAQDAALQNRCEALLGERKAMQASSETNGTKWLPTLCRILTTTTAPYNEARLPADVVTSPRALAFLCQTIMEQKVKVLVDNVADSACAVLDLVAASQSGADNHRAGDGYSGSTDHAQVVLPSPSLAPAGGTESAAEGEVSR-AGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAEDQQR 1504

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FRU7_ECTSI	2.120e-82	64.83	Kinesin-like protein n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5J9W7_9PHAE	2.950e-43	44.71	Kinesin motor domain-containing protein n=1 Tax=Ec...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12228	contig	L-elsbetiae_contig12228:1896..4196 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12228.1850.1	mRNA_L-elsbetiae_contig12228.1850.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12228 1689..4568 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12228.1850.1 ID=prot_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARAR
SEAALREEIRRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQEL
EELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAA
LKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGK
GGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLR
RLVQAAITALRNAEIEDDLRTKGTVTTAAVTAVVAAPAGEATTGSESAAV
AS*