mRNA_L-elsbetiae_contig12228.1850.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12228.1850.1
Unique NamemRNA_L-elsbetiae_contig12228.1850.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: D7FRU7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU7_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 8.940e-109
Identity = 227/336 (67.56%), Postives = 246/336 (73.21%), Query Frame = 2
Query:    2 RAGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKR-------IADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPEN--DGGKGG----GTNGHRPAV---PSSTSTGET-------TPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIED 940
            RAGA GAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEA        LK SA AQRP  +RQ PDD      E + E+LARTTQELEELR EN +LRK+       P   R D  + S   +  K        +A D+ + AAL++RCEALLGERKAMQTIMEQKVQVLVDNVADSACAVL+LVA  ++  D  +GG    G+  H   V   PSS   G T          AG   SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED
Sbjct:  210 RAGAGGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSSALAQRPLTERQGPDD------EVATEVLARTTQELEELRCENAELRKQIL----SPALRREDANSMSENREAGKEGEDDRSSVAHDSAQEAALQDRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLDLVAASQSGIDNRRGGDGHTGSTDHAQVVLPSPSSAPAGGTGSTGEGEVSRAGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAED 535          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.720e-69
Identity = 196/386 (50.78%), Postives = 221/386 (57.25%), Query Frame = 2
Query:    2 RAGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADD-------NGRGAALKNRCEALLGERKAMQ----------------------------------------------TIMEQKVQVLVDNVADSACAVLNLVAVPENDG-------GKGGGTNGHRPAVPS----------STSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIEDDLR 949
            RAG  GAKLLNAWEKIEELEGLVESSRSHNERLL+DLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQ      I    +DG+   A                 + SA  QRP  +RQ P+D      E + E+LARTTQELEELR EN +LRK+       P   R D    S   +  K   DD       + + AAL+NRCEALLGERKAMQ                                              TIMEQKV+VLVDNVADSACAVL+LVA  ++         G  G T+  +  +PS          S + GE +  AG   SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED  R
Sbjct: 1152 RAGVGGAKLLNAWEKIEELEGLVESSRSHNERLLKDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQI-----ICGVLIDGVLEHA-----------------QHSALTQRPLTERQGPED------EIATEVLARTTQELEELRCENAELRKQML----APALRREDANTISENREAGKEGEDDRSSVAHGSAQDAALQNRCEALLGERKAMQASSETNGTKWLPTLCRILTTTTAPYNEARLPADVVTSPRALAFLCQTIMEQKVKVLVDNVADSACAVLDLVAASQSGADNHRAGDGYSGSTDHAQVVLPSPSLAPAGGTESAAEGEVSR-AGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAEDQQR 1504          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A7S2HEU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HEU0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.040e-11
Identity = 78/229 (34.06%), Postives = 110/229 (48.03%), Query Frame = 2
Query:   26 LLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVA--RMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLN 706
            LL+A EKI EL  + E++R   E LL++LE+V+TDKVSMEYLLREKLE LVQ+EIE R+   R   D        R         A+ + S          L+ S   Q P G   E             EL ++  + L  LR + E                  DE     +E+ SK +    GR    + RC+ L+ ER+A+  IMEQK+Q+LV+  A++   ++N
Sbjct:   88 LLSAEEKIIELTQVAEAARVEREHLLKELEDVKTDKVSMEYLLREKLESLVQNEIEGRLVAFRSGGDDNASASSSRXXXXXXXXXASTSNS----------LQTSLQGQVPGGGDSE---------RARRELESKGGKNLRALRAQLEAR----------------DESILVMKERCSK-LERAAGRAVMTQERCDVLIKERQAIIRIMEQKIQLLVNQAANATRDLMN 280          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A6A3NJV1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NJV1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.700e-10
Identity = 83/308 (26.95%), Postives = 133/308 (43.18%), Query Frame = 2
Query:    8 GANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            G+ GA LL+A EKI+EL  LV++  + ++R+  +LE+V+++KVS+E+L+REKL++LVQ E+EAR                                         L+RS  ++    DRQ+               LA   ++LE L +EN++L+ R                            A  + +   L+ RC+ L+ ER+A+QTIME K++ LV  + +++ A L      E  G          PA                             + L+++V  L+RLV A+I ALRNA+
Sbjct:  575 GSGGASLLSADEKIQELRALVDAQSAEHQRMARELEDVKSEKVSVEFLMREKLDKLVQVELEARTKD--------------------------------------LERSDSSK----DRQQ---------------LANLQRQLEALISENQQLQAR----------------------------ATSDDQQLQLQARCDTLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGAEKLG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAD 759          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A5D6XF96_9STRA (Kinesin motor domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF96_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.630e-9
Identity = 86/310 (27.74%), Postives = 139/310 (44.84%), Query Frame = 2
Query:    8 GANGA--KLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            G  GA  +LL+A EKI+EL+ LV+S  + + RL  +LEEV+++KVS+E++LRE++E+LVQ+E+  R+ +       D           V A A                  + AQ                     E L +  + ++ L +EN++LR                 + AS+    +++  +++ +   L+ RCE L+ ERKA+QTIME K++ LV  +++++ A L      E  G                                 PA R      L+++V  L+RLV A+I ALRNAE
Sbjct:  719 GPGGAHERLLSAEEKIQELKVLVDSHAAEHARLARELEEVKSEKVSVEFVLRERVEKLVQTELATRMKQQSHTAAGDN---------NVAAPA------------------SLAQ--------------------TEKLVQLAKHVKTLESENQQLR-------------HLVRVGASSSSSSTEQHDEEHNK--QLQARCETLVKERKAVQTIMEHKIKALVTAISEASDATLQSAGGVEQLG--------------------------------EPAKR------LTREVHALQRLVNASIIALRNAE 928          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: H3H452_PHYRM (Kinesin motor domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3H452_PHYRM)

HSP 1 Score: 69.3 bits (168), Expect = 6.940e-9
Identity = 81/309 (26.21%), Postives = 136/309 (44.01%), Query Frame = 2
Query:    5 AGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            AG+ G+ LL+A EKI+EL  LV++  + ++R+  +LE+V+++KVS+E+ +REK+++LVQ E+EAR                  D  R +++                           D+Q+               LA   ++LE L +EN++L+ R                 A+T+++  +           L+ RCE L+ ER+A+QTIME K++ LV  + +++ A L      E  G          PA                             + L+++V  L+RLV A+I ALRNA+
Sbjct:  866 AGSGGSNLLSAEEKIKELCSLVDTQSAEHQRMARELEDVKSEKVSVEFQMREKIDKLVQVELEARTK----------------DLSRTDSSR--------------------------DKQQ---------------LANLQRQLETLMSENQQLQAR-----------------ATTDDQQQQ-----------LQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGAERLG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAD 1051          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A7S1GDT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDT6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.990e-9
Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   14 NGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVA 205
            +GA LL+A +KI EL  L+  +    ERL +++EEV+++KVS EYLLREKLE++VQSEIE+R+A
Sbjct:   43 DGAGLLSAEDKIAELTKLLTRASREQERLSKEIEEVRSEKVSTEYLLREKLEKIVQSEIESRLA 106          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A8K1C3X8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3X8_PYTOL)

HSP 1 Score: 67.4 bits (163), Expect = 2.740e-8
Identity = 82/302 (27.15%), Postives = 127/302 (42.05%), Query Frame = 2
Query:   26 LLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            LL+A EKI EL+G V++     +RL  +LE+V+ +KVS+EYLLR++LE+LVQ E+EAR+  +                                                 ++Q+   D I           + T++LE +  EN +L            K  +    +S+E+              AL+ RCE L+ ER+A+QTIMEQK++ LV+ +++++ A        E  G                                 PA      + L+K+V  L+RLV A+I ALRNAE
Sbjct:  736 LLSAEEKIHELKGFVDAQGMETQRLQRELEDVKAEKVSVEYLLRDRLEKLVQVEMEARMKSL-----------------------------------------------VWNKQQEYQDQI----------TKLTRQLESVDLENRRL------------KEASGASTSSSEQ--------------ALQVRCETLVKERRAVQTIMEQKIKTLVNAISEASEATFQTAGGAEQLG--------------------------------DPA------KWLAKEVQALQRLVNASIVALRNAE 916          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A225X265_9STRA (Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X265_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.820e-8
Identity = 82/305 (26.89%), Postives = 129/305 (42.30%), Query Frame = 2
Query:   17 GAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            G+ LL+A EKI+EL  LV +  + ++R+ ++LE+V+++KVS+E+ +REKLE+LVQ E+EAR   +H           + D  R +                  K+ A  QR                            +LE L  EN++L+ R                 A+ +++              L+ RCE L+ ER+A+QTIME K++ LV  + +++ A L      E  G          PA                             + L+++V  L+RLV A+I ALRNAE
Sbjct:  842 GSALLSAEEKIKELRTLVNTQSTEHQRMAKELEDVKSEKVSVEFQMREKLEKLVQVELEARTKDLH-----------RADSTRDK------------------KQFATLQR----------------------------QLENLMVENQQLQAR----------------GATGDQQ------------TQLQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGVEKIG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAE 1023          
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A662YDQ5_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDQ5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.770e-8
Identity = 82/309 (26.54%), Postives = 130/309 (42.07%), Query Frame = 2
Query:    5 AGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931
            +GA G  LL+A EK++EL  LV++  + ++R+ ++LE+V+++KVS+E+LLREKLE+LVQ E+EAR+  M+                                            RP+    +P              L +  ++LE L +EN++L+   N                            DN   A L+ RCE L+ ER+A+QTIME K++ LV  + +++ A +            GG      PA                             + L ++V  L+RLV A+I AL NA+
Sbjct:  877 SGAPG--LLSAEEKMQELRTLVDTQTAEHQRMAKELEDVKSEKVSVEFLLREKLEKLVQVELEARLKAMN--------------------------------------------RPSSSDDKPQ-------------LVQMQRQLEVLASENQRLKSGVN--------------------------TQDN---AQLQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATMQTA---------GGADRLGEPA-----------------------------KWLVREVNALQRLVNASIVALHNAD 1059          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FRU7_ECTSI8.940e-10967.56Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5J9W7_9PHAE2.720e-6950.78Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A7S2HEU0_9STRA2.040e-1134.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6A3NJV1_9STRA3.700e-1026.95Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A5D6XF96_9STRA1.630e-927.74Kinesin motor domain-containing protein n=1 Tax=Py... [more]
H3H452_PHYRM6.940e-926.21Kinesin motor domain-containing protein n=8 Tax=Ph... [more]
A0A7S1GDT6_9STRA6.990e-956.25Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8K1C3X8_PYTOL2.740e-827.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225X265_9STRA2.820e-826.89Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
A0A662YDQ5_9STRA3.770e-826.54Kinesin motor domain-containing protein n=1 Tax=No... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12228contigL-elsbetiae_contig12228:1689..4568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1255
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12228.1850.1prot_L-elsbetiae_contig12228.1850.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12228 1896..4196 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815421.8673398-UTR-L-elsbetiae_contig12228:1688..18951622815421.8673398-UTR-L-elsbetiae_contig12228:1688..1895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 1689..1895 -
1691682889.9239273-UTR-L-elsbetiae_contig12228:1688..18951691682889.9239273-UTR-L-elsbetiae_contig12228:1688..1895Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 1689..1895 -
1622815421.9420242-UTR-L-elsbetiae_contig12228:4196..42391622815421.9420242-UTR-L-elsbetiae_contig12228:4196..4239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 4197..4239 -
1691682889.9920955-UTR-L-elsbetiae_contig12228:4196..42391691682889.9920955-UTR-L-elsbetiae_contig12228:4196..4239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 4197..4239 -
1622815421.9580278-UTR-L-elsbetiae_contig12228:4472..45681622815421.9580278-UTR-L-elsbetiae_contig12228:4472..4568Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 4473..4568 -
1691682890.0017323-UTR-L-elsbetiae_contig12228:4472..45681691682890.0017323-UTR-L-elsbetiae_contig12228:4472..4568Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12228 4473..4568 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815421.8780656-CDS-L-elsbetiae_contig12228:1895..23061622815421.8780656-CDS-L-elsbetiae_contig12228:1895..2306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 1896..2306 -
1691682889.9356914-CDS-L-elsbetiae_contig12228:1895..23061691682889.9356914-CDS-L-elsbetiae_contig12228:1895..2306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 1896..2306 -
1622815421.8901296-CDS-L-elsbetiae_contig12228:2610..27391622815421.8901296-CDS-L-elsbetiae_contig12228:2610..2739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 2611..2739 -
1691682889.9483943-CDS-L-elsbetiae_contig12228:2610..27391691682889.9483943-CDS-L-elsbetiae_contig12228:2610..2739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 2611..2739 -
1622815421.9024825-CDS-L-elsbetiae_contig12228:3080..32551622815421.9024825-CDS-L-elsbetiae_contig12228:3080..3255Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 3081..3255 -
1691682889.9565313-CDS-L-elsbetiae_contig12228:3080..32551691682889.9565313-CDS-L-elsbetiae_contig12228:3080..3255Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 3081..3255 -
1622815421.915731-CDS-L-elsbetiae_contig12228:3745..38611622815421.915731-CDS-L-elsbetiae_contig12228:3745..3861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 3746..3861 -
1691682889.9663815-CDS-L-elsbetiae_contig12228:3745..38611691682889.9663815-CDS-L-elsbetiae_contig12228:3745..3861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 3746..3861 -
1622815421.9311714-CDS-L-elsbetiae_contig12228:4118..41961622815421.9311714-CDS-L-elsbetiae_contig12228:4118..4196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 4119..4196 -
1691682889.981476-CDS-L-elsbetiae_contig12228:4118..41961691682889.981476-CDS-L-elsbetiae_contig12228:4118..4196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12228 4119..4196 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12228.1850.1

>prot_L-elsbetiae_contig12228.1850.1 ID=prot_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARAR
SEAALREEIRRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQEL
EELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAA
LKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGK
GGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLR
RLVQAAITALRNAEIEDDLRTKGTVTTAAVTAVVAAPAGEATTGSESAAV
AS*
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mRNA from alignment at L-elsbetiae_contig12228:1689..4568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12228.1850.1 ID=mRNA_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2880bp|location=Sequence derived from alignment at L-elsbetiae_contig12228:1689..4568- (Laminarionema elsbetiae ELsaHSoW15)
GAGAGCGGGGGCGAACGGAGCAAAACTGCTGAATGCTTGGGAGAAGATCG AGGAGTTGGAAGGGCTGGTAGAGTCAAGCCGTTCCCATAACGAGAGGTAT GGGAGGGCGAGAGGGGGATGCATCCATAGCGGGGGCCCAAAGTAGTGTCC TGGTTTTCCTCATTCGGGTGCAACTGAAGTGGGGGGGGGGGGGGTACTCG TTTGGGTGTTTTTCTTTTGGTCATTGTTCTCCGCCTTGCATTCTTTGGGG ACCTTCATATTTTCGAGAGAGTATGAAAAGTTCGAGGCCAAGTGCCGTTC CCATGGTTCGACGTTTCTCCTCATTCCAGATTGCTGGAAGACCTCGAAGA GGTGCAAACCGACAAGGTCTCCATGGAATACCTCCTGCGTGAGAAGCTCG AGCGGCTGGTTCAGTCCGAGATCGAGGCGAGGGTGGCCCGGATGCATCAG GTAAAACACAAAGCTAGGGGTTCGTACAGCCTTCCCCAAGAGCCGTTGTG CAACCTTTCGGCATGACGACTTCTGTCTTCTCCGAACTTTCAGATTTTCC TTCCCTTTAACCCTTGAAAGTGCTGAAAACGTTGGACTCTGGTTTCATCA CTTAGACATCTCCAAGGTAGTCGTTCAACAGCACCCCAAGGATCCCTTCG CTTTCACACTACCGTTAAAAGTACGAATGCATTTTCCCTTGCCCTCCCGT TTTCAAGGATGGCGGAGTTGATGAGATACTGAGGCGCCAGCTAGACGGGC TAAGGGTAGAGGCGGCAGCAAGGGCCAGGAGTGAAGCTGCTTTGAGAGAA GAAATCCGACGTCTCAAGCGCAGGTACGTGTATATCAGACGCATGACGCA ACGAAAAGCTATGCTCATATGAATGAACATATTGGCTCCAAGCTGTTGAC AAACCAAAGGATCGCTATGTTTTGGAGGAAGTCCAACCCAGCATCCACTT ACAGCGGCAGATTGACTGGCATAACTACTTATTGCGGTCTGCTTTCACCT CATTCAAACGGTTTGGGGGCAAGTGAAAGGCTGAACTCGTTACTGCAGGA CACGACCCCGGAATTGATGCTTCTAGAGGGATTCTCAGATTAAAACTTTG ACAGCATTGCTCCTCAGTCGGCAGTTGCTGCACCCTTGCCATTGTGTGAA GGCAATAGGTGATGTGCTTCCTGTGAAAGGACGCAGCACGGTAGCGTAGA ATCCGCTCGCTCAGTACCCACGGCGATAACCTTTCCGTTTGTGTTGAGAC CGCCCACATATGTCTCAGTCTTTCTCCCGGCTGCACTATACTTCTTGCAT GCGTGGTACACAGCGCTTTTGCCCAACGCCCAGCTGGCGATCGCCAAGAG CCAGACGACGATGATATTCGCCACCGTGAGACCTCGGCCGAGCTTCTTGC GAGGACAACCCAAGAGCTCGAGGAGCTTCGCACAGAAAACGAGAAGCTCC GGAAGCGAGAAAATGAGCATGAGCACGGTCCAAAGAAGGTGCGGAAGCTG TAAGGCGCGCGAGAAGGTTGCACCTACTTCGTTGCAGTGAGTGGCCAGCG GGTAATGTAGTTTCGCATGATTCTGCGCTACTGCCGTGGCTTCCTGAAAA TGAAGGCACTTCGGGGAAGCGTTGAGAAAGCAACGATTCTCGAAGAAGCG GCGCCGGGAAGAGCGGCGCGCCGGGGTCTATCCCGCGGAAGACGTGCGGT GGCAGTCGATACTACAACCGCCACAAGCACGCGAGTTTTCCCGTTCCTGC TGCCGGAAGAACCGCGATGTCGCTCCCGCCAGTTTGTTTGATCTTGTCTT TTTTAATTGGCACGGTTTCTCTGGAACAGAACCGCACAGATGAACTTGCG GCATCGACGGAAGAAAAGGGCAGCAAGAGAATTGCCGATGACAACGGCCG AGGAGCGGCGCTCAAAAACCGCTGCGAGGCATTGCTGGGAGAACGCAAGG CGATGCAGGCGAGTTTGGAGGAAGTTGTTTAAGCAGCAGGAACTGAAAAG GGGGGTGGTTCGTCGACACCGCTTCAGAGGGGCATATGGCACCAGTAGTT TATTTAAAAAACGTCTTGGTGATCGAAATACCACCAGCGGTGGCAGCGTG GAATGTTAATTTACACGGATGGCTTTCAGGTCAGTACTTCGTTTCCTCGA TGTTCGACAAAGGTCTCTCCGGGAGTGCTGATGTACCCACCAGTTTCTGT ATGCTCAAGGCTAAAGGCGAAAGCCACCTACGCTTTCCACCTTGTCAACC ACCAATGTCCAGACCATCATGGAGCAAAAGGTTCAGGTGCTTGTCGACAA CGTAGCGGATTCTGCATGCGCGGTCCTTAACCTGGTGGCCGTTCCGGAAA ACGACGGCGGTAAAGGCGGCGGTACCAACGGCCATCGTCCGGCTGTGCCA TCGTCTACCTCGACAGGAGAAACAACACCGCCCGCCGGGGCGGGGCCTTC ATCTTCCCCGGCAGCAAGAGACGCGGCCGGCAGGGCGCTGAGCAAAGACG TTGGCCAATTGAGAAGGCTCGTCCAGGCCGCTATCACCGCGCTTAGGAAT GCAGAGATCGAGGACGATCTGAGAACTAAGGGTACGGTGACAACTGCGGC GGTGACGGCGGTGGTCGCAGCGCCCGCGGGTGAAGCAACGACAGGGAGCG AGTCGGCCGCTGTAGCGAGTTAGCCGTGAAAAGCTTCCGGATCTGTTGGG AAAGCACTTGCGGCGAGCAAACTAGAACATTGTCAAATAGACAGCCGGTC GAAGCACAGCTTACAACAGGTCAAAGTTGAGCATATCAAGACAGTCTACG AAGTGTTGGGTGCTCTGATGGGTAGGTGCCATTCAGCACAATAGGCATGA TTAATAGGCGGAGACATATCTATTGGCGCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12228:1689..4568-

>mRNA_L-elsbetiae_contig12228.1850.1 ID=mRNA_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1818bp|location=Sequence derived from alignment at L-elsbetiae_contig12228:1689..4568- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAATACCTCCTGCGTGAGAAGCTCGAGCGGCTGGTTCAGTCCGAGAT
CGAGGCGAGGGTGGCCCGGATGCATCAGATGGAATACCTCCTGCGTGAGA
AGCTCGAGCGGCTGGTTCAGTCCGAGATCGAGGCGAGGGTGGCCCGGATG
CATCAGGATGGCGGAGTTGATGAGATACTGAGGCGCCAGCTAGACGGGCT
AAGGGTAGAGGCGGCAGCAAGGGCCAGGAGTGAAGCTGCTTTGAGAGAAG
AAATCCGACGTCTCAAGCGCAGGATGGCGGAGTTGATGAGATACTGAGGC
GCCAGCTAGACGGGCTAAGGGTAGAGGCGGCAGCAAGGGCCAGGAGTGAA
GCTGCTTTGAGAGAAGAAATCCGACGTCTCAAGCGCAGCGCTTTTGCCCA
ACGCCCAGCTGGCGATCGCCAAGAGCCAGACGACGATGATATTCGCCACC
GTGAGACCTCGGCCGAGCTTCTTGCGAGGACAACCCAAGAGCTCGAGGAG
CTTCGCACAGAAAACGAGAAGCTCCGGAAGCGAGAAAATGAGCATGAGCA
CGGTCCAAAGAAGCGCTTTTGCCCAACGCCCAGCTGGCGATCGCCAAGAG
CCAGACGACGATGATATTCGCCACCGTGAGACCTCGGCCGAGCTTCTTGC
GAGGACAACCCAAGAGCTCGAGGAGCTTCGCACAGAAAACGAGAAGCTCC
GGAAGCGAGAAAATGAGCATGAGCACGGTCCAAAGAAGAACCGCACAGAT
GAACTTGCGGCATCGACGGAAGAAAAGGGCAGCAAGAGAATTGCCGATGA
CAACGGCCGAGGAGCGGCGCTCAAAAACCGCTGCGAGGCATTGCTGGGAG
AACGCAAGGCGATGCAGAACCGCACAGATGAACTTGCGGCATCGACGGAA
GAAAAGGGCAGCAAGAGAATTGCCGATGACAACGGCCGAGGAGCGGCGCT
CAAAAACCGCTGCGAGGCATTGCTGGGAGAACGCAAGGCGATGCAGACCA
TCATGGAGCAAAAGGTTCAGGTGCTTGTCGACAACGTAGCGGATTCTGCA
TGCGCGGTCCTTAACCTGGTGGCCGTTCCGGAAAACGACGGCGGTAAAGG
CGGCGGTACCAACGGCCATCGTCCGGCTGTGCCATCGTCTACCTCGACAG
GAGAAACAACACCGCCCGCCGGGGCGGGGCCTTCATCTTCCCCGGCAGCA
AGAGACGCGGCCGGCAGGGCGCTGAGCAAAGACGTTGGCCAATTGAGAAG
GCTCGTCCAGGCCGCTATCACCGCGCTTAGGAATGCAGAGATCGAGGACG
ATCTGAGAACTAAGGGTACGGTGACAACTGCGGCGGTGACGGCGGTGGTC
GCAGCGCCCGCGGGTGAAGCAACGACAGGGAGCGAGTCGGCCGCTGTAGC
GAGTTAGACCATCATGGAGCAAAAGGTTCAGGTGCTTGTCGACAACGTAG
CGGATTCTGCATGCGCGGTCCTTAACCTGGTGGCCGTTCCGGAAAACGAC
GGCGGTAAAGGCGGCGGTACCAACGGCCATCGTCCGGCTGTGCCATCGTC
TACCTCGACAGGAGAAACAACACCGCCCGCCGGGGCGGGGCCTTCATCTT
CCCCGGCAGCAAGAGACGCGGCCGGCAGGGCGCTGAGCAAAGACGTTGGC
CAATTGAGAAGGCTCGTCCAGGCCGCTATCACCGCGCTTAGGAATGCAGA
GATCGAGGACGATCTGAGAACTAAGGGTACGGTGACAACTGCGGCGGTGA
CGGCGGTGGTCGCAGCGCCCGCGGGTGAAGCAACGACAGGGAGCGAGTCG
GCCGCTGTAGCGAGTTAG
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