mRNA_L-elsbetiae_contig12228.1850.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: D7FRU7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU7_ECTSI) HSP 1 Score: 340 bits (872), Expect = 8.940e-109 Identity = 227/336 (67.56%), Postives = 246/336 (73.21%), Query Frame = 2 Query: 2 RAGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKR-------IADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPEN--DGGKGG----GTNGHRPAV---PSSTSTGET-------TPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIED 940 RAGA GAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEA LK SA AQRP +RQ PDD E + E+LARTTQELEELR EN +LRK+ P R D + S + K +A D+ + AAL++RCEALLGERKAMQTIMEQKVQVLVDNVADSACAVL+LVA ++ D +GG G+ H V PSS G T AG SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED Sbjct: 210 RAGAGGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSSALAQRPLTERQGPDD------EVATEVLARTTQELEELRCENAELRKQIL----SPALRREDANSMSENREAGKEGEDDRSSVAHDSAQEAALQDRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLDLVAASQSGIDNRRGGDGHTGSTDHAQVVLPSPSSAPAGGTGSTGEGEVSRAGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAED 535
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE) HSP 1 Score: 248 bits (633), Expect = 2.720e-69 Identity = 196/386 (50.78%), Postives = 221/386 (57.25%), Query Frame = 2 Query: 2 RAGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADD-------NGRGAALKNRCEALLGERKAMQ----------------------------------------------TIMEQKVQVLVDNVADSACAVLNLVAVPENDG-------GKGGGTNGHRPAVPS----------STSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAEIEDDLR 949 RAG GAKLLNAWEKIEELEGLVESSRSHNERLL+DLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQ I +DG+ A + SA QRP +RQ P+D E + E+LARTTQELEELR EN +LRK+ P R D S + K DD + + AAL+NRCEALLGERKAMQ TIMEQKV+VLVDNVADSACAVL+LVA ++ G G T+ + +PS S + GE + AG SSSPAAR+AAGRALSKDVGQLRRLVQAAITALRNA+ ED R Sbjct: 1152 RAGVGGAKLLNAWEKIEELEGLVESSRSHNERLLKDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQI-----ICGVLIDGVLEHA-----------------QHSALTQRPLTERQGPED------EIATEVLARTTQELEELRCENAELRKQML----APALRREDANTISENREAGKEGEDDRSSVAHGSAQDAALQNRCEALLGERKAMQASSETNGTKWLPTLCRILTTTTAPYNEARLPADVVTSPRALAFLCQTIMEQKVKVLVDNVADSACAVLDLVAASQSGADNHRAGDGYSGSTDHAQVVLPSPSLAPAGGTESAAEGEVSR-AGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAEDQQR 1504
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A7S2HEU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HEU0_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.040e-11 Identity = 78/229 (34.06%), Postives = 110/229 (48.03%), Query Frame = 2 Query: 26 LLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVA--RMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLN 706 LL+A EKI EL + E++R E LL++LE+V+TDKVSMEYLLREKLE LVQ+EIE R+ R D R A+ + S L+ S Q P G E EL ++ + L LR + E DE +E+ SK + GR + RC+ L+ ER+A+ IMEQK+Q+LV+ A++ ++N Sbjct: 88 LLSAEEKIIELTQVAEAARVEREHLLKELEDVKTDKVSMEYLLREKLESLVQNEIEGRLVAFRSGGDDNASASSSRXXXXXXXXXASTSNS----------LQTSLQGQVPGGGDSE---------RARRELESKGGKNLRALRAQLEAR----------------DESILVMKERCSK-LERAAGRAVMTQERCDVLIKERQAIIRIMEQKIQLLVNQAANATRDLMN 280
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A6A3NJV1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NJV1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.700e-10 Identity = 83/308 (26.95%), Postives = 133/308 (43.18%), Query Frame = 2 Query: 8 GANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 G+ GA LL+A EKI+EL LV++ + ++R+ +LE+V+++KVS+E+L+REKL++LVQ E+EAR L+RS ++ DRQ+ LA ++LE L +EN++L+ R A + + L+ RC+ L+ ER+A+QTIME K++ LV + +++ A L E G PA + L+++V L+RLV A+I ALRNA+ Sbjct: 575 GSGGASLLSADEKIQELRALVDAQSAEHQRMARELEDVKSEKVSVEFLMREKLDKLVQVELEARTKD--------------------------------------LERSDSSK----DRQQ---------------LANLQRQLEALISENQQLQAR----------------------------ATSDDQQLQLQARCDTLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGAEKLG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAD 759
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A5D6XF96_9STRA (Kinesin motor domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF96_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.630e-9 Identity = 86/310 (27.74%), Postives = 139/310 (44.84%), Query Frame = 2 Query: 8 GANGA--KLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 G GA +LL+A EKI+EL+ LV+S + + RL +LEEV+++KVS+E++LRE++E+LVQ+E+ R+ + D V A A + AQ E L + + ++ L +EN++LR + AS+ +++ +++ + L+ RCE L+ ERKA+QTIME K++ LV +++++ A L E G PA R L+++V L+RLV A+I ALRNAE Sbjct: 719 GPGGAHERLLSAEEKIQELKVLVDSHAAEHARLARELEEVKSEKVSVEFVLRERVEKLVQTELATRMKQQSHTAAGDN---------NVAAPA------------------SLAQ--------------------TEKLVQLAKHVKTLESENQQLR-------------HLVRVGASSSSSSTEQHDEEHNK--QLQARCETLVKERKAVQTIMEHKIKALVTAISEASDATLQSAGGVEQLG--------------------------------EPAKR------LTREVHALQRLVNASIIALRNAE 928
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: H3H452_PHYRM (Kinesin motor domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3H452_PHYRM) HSP 1 Score: 69.3 bits (168), Expect = 6.940e-9 Identity = 81/309 (26.21%), Postives = 136/309 (44.01%), Query Frame = 2 Query: 5 AGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 AG+ G+ LL+A EKI+EL LV++ + ++R+ +LE+V+++KVS+E+ +REK+++LVQ E+EAR D R +++ D+Q+ LA ++LE L +EN++L+ R A+T+++ + L+ RCE L+ ER+A+QTIME K++ LV + +++ A L E G PA + L+++V L+RLV A+I ALRNA+ Sbjct: 866 AGSGGSNLLSAEEKIKELCSLVDTQSAEHQRMARELEDVKSEKVSVEFQMREKIDKLVQVELEARTK----------------DLSRTDSSR--------------------------DKQQ---------------LANLQRQLETLMSENQQLQAR-----------------ATTDDQQQQ-----------LQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGAERLG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAD 1051
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A7S1GDT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDT6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.990e-9 Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 14 NGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVA 205 +GA LL+A +KI EL L+ + ERL +++EEV+++KVS EYLLREKLE++VQSEIE+R+A Sbjct: 43 DGAGLLSAEDKIAELTKLLTRASREQERLSKEIEEVRSEKVSTEYLLREKLEKIVQSEIESRLA 106
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A8K1C3X8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3X8_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 2.740e-8 Identity = 82/302 (27.15%), Postives = 127/302 (42.05%), Query Frame = 2 Query: 26 LLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 LL+A EKI EL+G V++ +RL +LE+V+ +KVS+EYLLR++LE+LVQ E+EAR+ + ++Q+ D I + T++LE + EN +L K + +S+E+ AL+ RCE L+ ER+A+QTIMEQK++ LV+ +++++ A E G PA + L+K+V L+RLV A+I ALRNAE Sbjct: 736 LLSAEEKIHELKGFVDAQGMETQRLQRELEDVKAEKVSVEYLLRDRLEKLVQVEMEARMKSL-----------------------------------------------VWNKQQEYQDQI----------TKLTRQLESVDLENRRL------------KEASGASTSSSEQ--------------ALQVRCETLVKERRAVQTIMEQKIKTLVNAISEASEATFQTAGGAEQLG--------------------------------DPA------KWLAKEVQALQRLVNASIVALRNAE 916
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A225X265_9STRA (Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X265_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.820e-8 Identity = 82/305 (26.89%), Postives = 129/305 (42.30%), Query Frame = 2 Query: 17 GAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 G+ LL+A EKI+EL LV + + ++R+ ++LE+V+++KVS+E+ +REKLE+LVQ E+EAR +H + D R + K+ A QR +LE L EN++L+ R A+ +++ L+ RCE L+ ER+A+QTIME K++ LV + +++ A L E G PA + L+++V L+RLV A+I ALRNAE Sbjct: 842 GSALLSAEEKIKELRTLVNTQSTEHQRMAKELEDVKSEKVSVEFQMREKLEKLVQVELEARTKDLH-----------RADSTRDK------------------KQFATLQR----------------------------QLENLMVENQQLQAR----------------GATGDQQ------------TQLQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATLQTAGGVEKIG---------EPA-----------------------------KWLAREVNALQRLVNASIVALRNAE 1023
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Match: A0A662YDQ5_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDQ5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.770e-8 Identity = 82/309 (26.54%), Postives = 130/309 (42.07%), Query Frame = 2 Query: 5 AGANGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAAXXXXXXRLKRSAFAQRPAGDRQEPDDDDIRHRETSAELLARTTQELEELRTENEKLRKRENEHEHGPKKNRTDELAASTEEKGSKRIADDNGRGAALKNRCEALLGERKAMQTIMEQKVQVLVDNVADSACAVLNLVAVPENDGGKGGGTNGHRPAVPSSTSTGETTPPAGAGPSSSPAARDAAGRALSKDVGQLRRLVQAAITALRNAE 931 +GA G LL+A EK++EL LV++ + ++R+ ++LE+V+++KVS+E+LLREKLE+LVQ E+EAR+ M+ RP+ +P L + ++LE L +EN++L+ N DN A L+ RCE L+ ER+A+QTIME K++ LV + +++ A + GG PA + L ++V L+RLV A+I AL NA+ Sbjct: 877 SGAPG--LLSAEEKMQELRTLVDTQTAEHQRMAKELEDVKSEKVSVEFLLREKLEKLVQVELEARLKAMN--------------------------------------------RPSSSDDKPQ-------------LVQMQRQLEVLASENQRLKSGVN--------------------------TQDN---AQLQARCETLVKERRAVQTIMEHKIKALVTAIGEASDATMQTA---------GGADRLGEPA-----------------------------KWLVREVNALQRLVNASIVALHNAD 1059 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12228.1850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12228.1850.1 >prot_L-elsbetiae_contig12228.1850.1 ID=prot_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp MEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARback to top mRNA from alignment at L-elsbetiae_contig12228:1689..4568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12228.1850.1 ID=mRNA_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2880bp|location=Sequence derived from alignment at L-elsbetiae_contig12228:1689..4568- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12228:1689..4568- >mRNA_L-elsbetiae_contig12228.1850.1 ID=mRNA_L-elsbetiae_contig12228.1850.1|Name=mRNA_L-elsbetiae_contig12228.1850.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1818bp|location=Sequence derived from alignment at L-elsbetiae_contig12228:1689..4568- (Laminarionema elsbetiae ELsaHSoW15)back to top |