prot_L-elsbetiae_contig12227.1849.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12227.1849.1
Unique Nameprot_L-elsbetiae_contig12227.1849.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length282
Homology
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BLAST of mRNA_L-elsbetiae_contig12227.1849.1 vs. uniprot
Match: D8LGQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ5_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 3.660e-14
Identity = 73/158 (46.20%), Postives = 80/158 (50.63%), Query Frame = 0 
Query:   96 RRRIKRARVALEEAFDELGRSAADELGLAPPAYMDLDFGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIPPIPADGVLERLEEAVEEGFDVVGGAXXXXXXXXXESVLALDVRMGRARASLETALNELGLTVPSES 253
            RRRIKRARVALE+A DELG   +       PAYM+LDFG                                                     P   D +LERLEEAVEEGF      XXXXXXXXX  VLALD R+ RARAS+ETALNELGLTVPS+S
Sbjct:  130 RRRIKRARVALEDALDELGLGGS-------PAYMNLDFGPPDGGGSKKKEVEEVVGKEGRGSGWLSQWRKRGGGA-----------------PATPDEMLERLEEAVEEGFXXXXXXXXXXXXXXXXXVLALDDRVERARASVETALNELGLTVPSKS 263
[Close]
BLAST of mRNA_L-elsbetiae_contig12227.1849.1 vs. uniprot
Match: A0A6H5JG81_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG81_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.050e-13
Identity = 79/156 (50.64%), Postives = 85/156 (54.49%), Query Frame = 0 
Query:   98 RIKRARVALEEAFDELGRSAADELGLAPPAYMDLDFGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIPPIPADGVLERLEEAVEEGFDVVGGAXXXXXXXXXESVLALDVRMGRARASLETALNELGLTVPSES 253
            RIKRARVALE+A DELG           PAYMDLDFG            XXXXXXX                                  P   D +L+ LEEAVEEGF+ VG  XXXXXXXXX  VLALD R+ RARAS+E ALNELGLTVPSES
Sbjct:  234 RIKRARVALEDALDELGLGGW-------PAYMDLDFGPPDGGGSKEEAEXXXXXXXVVGKEGRGSGWLSQWRKRGGGA------------PATPDEMLDLLEEAVEEGFEAVGXXXXXXXXXXXXXVLALDDRVERARASVEAALNELGLTVPSES 370
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12227.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGQ5_ECTSI3.660e-1446.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG81_9PHAE2.050e-1350.64GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12227contigL-elsbetiae_contig12227:2187..5222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12227.1849.1mRNA_L-elsbetiae_contig12227.1849.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12227 2186..5222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12227.1849.1 ID=prot_L-elsbetiae_contig12227.1849.1|Name=mRNA_L-elsbetiae_contig12227.1849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=282bp
GEPAAATAAEESRTTFLHPSSDEQDDSDNSRATTTTNAAAEKIPGERKEG
AESAVAAAAAGNGNVSGEARKSGGGGGGGDKAAGPYSAAGAAEAARRRIK
RARVALEEAFDELGRSAADELGLAPPAYMDLDFGSTPPPPPPPSPAAVAE
DEEGGPVASSKEGGGRGGWLRQWRSRDGGGGGGGIIPPIPADGVLERLEE
AVEEGFDVVGGAVEESFEAVGESVLALDVRMGRARASLETALNELGLTVP
SESSTAAAAAAKVEAPGVETREEGGATVEDKE
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