prot_L-elsbetiae_contig12223.1848.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12223.1848.1
Unique Nameprot_L-elsbetiae_contig12223.1848.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig12223.1848.1 vs. uniprot
Match: A0A6H5K5B5_9PHAE (BAH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5B5_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.780e-23
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 0 
Query:    4 PGPEAETSCVSQVFMLSVKLTLIPELFDKFVMALTDYRRQRILIHELVDVVSECFDHREVREMRLVEEFNTFLPPGHAVHALR 86
            P P+AET  V  VFM   K TL PE FDKFV AL+ YR QR+ I ELVDVV +CF+H E RE++LV+EFN+FLPPG+AV   R
Sbjct: 1199 PRPQAETGSVLHVFMDRCKATLTPERFDKFVSALSQYREQRLSIGELVDVVGQCFNHHEEREVKLVKEFNSFLPPGNAVKITR 1281
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12223.1848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5B5_9PHAE1.780e-2361.45BAH domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1160.11coord: 15..77
e-value: 7.3E-6
score: 28.3
IPR036600Paired amphipathic helix superfamilySUPERFAMILY47762PAH2 domaincoord: 17..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12223contigL-elsbetiae_contig12223:1348..3110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12223.1848.1mRNA_L-elsbetiae_contig12223.1848.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12223 1323..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12223.1848.1 ID=prot_L-elsbetiae_contig12223.1848.1|Name=mRNA_L-elsbetiae_contig12223.1848.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MAPPGPEAETSCVSQVFMLSVKLTLIPELFDKFVMALTDYRRQRILIHEL
VDVVSECFDHREVREMRLVEEFNTFLPPGHAVHALRNAVRLEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036600PAH_sf