prot_L-elsbetiae_contig12216.1845.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12216.1845.1
Unique Nameprot_L-elsbetiae_contig12216.1845.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length132
Homology
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BLAST of mRNA_L-elsbetiae_contig12216.1845.1 vs. uniprot
Match: D8LH17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH17_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 8.630e-27
Identity = 66/99 (66.67%), Postives = 77/99 (77.78%), Query Frame = 0 
Query:   27 QAQQDKEAAQNELVKERLFDLERSVEMSDWSERKLAKENEGLQGLISRNRKRFQKELARLGDASAELQEXXXXXXXXXXXXXQEKKTVRELTNQVNMLQ 125
            QA QDKE AQ ELVKERLFDLERSVEM++WSERKLAKENEGLQGLISRNR+RF KELARL  ASA+L++             +E++TV+EL NQV  L+
Sbjct:  343 QAIQDKEEAQTELVKERLFDLERSVEMAEWSERKLAKENEGLQGLISRNRQRFHKELARLTVASADLEDKSNALKDLEAVYDRERQTVKELGNQVETLK 441
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12216.1845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH17_ECTSI8.630e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..43
NoneNo IPR availableCOILSCoilCoilcoord: 76..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12216contigL-elsbetiae_contig12216:684..2870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12216.1845.1mRNA_L-elsbetiae_contig12216.1845.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12216 684..2870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12216.1845.1 ID=prot_L-elsbetiae_contig12216.1845.1|Name=mRNA_L-elsbetiae_contig12216.1845.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
RVPGLEGQLREEAEARELEKLRADELQAQQDKEAAQNELVKERLFDLERS
VEMSDWSERKLAKENEGLQGLISRNRKRFQKELARLGDASAELQEKSATL
NEVEASLSQEKKTVRELTNQVNMLQLMCYSF*
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