prot_L-elsbetiae_contig122.1835.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig122.1835.1
Unique Nameprot_L-elsbetiae_contig122.1835.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length299
Homology
BLAST of mRNA_L-elsbetiae_contig122.1835.1 vs. uniprot
Match: D7G0E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E3_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.390e-47
Identity = 146/342 (42.69%), Postives = 190/342 (55.56%), Query Frame = 0
Query:    8 RSLAAQQCAQVRTELALALGRLSTRSSLVSNTQSAARRASTSNRTLLLRLVGSELRRWRERAATTSASQSREDAETT-------------PDEDGVGADQQYE----NTDHTSTSQS--------TDGGIETEGDDLG-------------AESDSSERRAGGSGEKQRLDLSPRKKMGLGAKR-RSKRSEAGTGAILNLSKVGVDDETLGRVVRKVLRACIHGSH-----GQLSQSDG----DRQKHEESAKANAVVPLARLLLRGNNITDAGALLLVPLVKGSPHMSELDLRDNAIGASGKEALKKALTSNPRVHRVVSEDLCGNLG--GTRGLGGLVLR 299
            R LAAQQCA+VRTELALALGRLS R+ LVS+T++AARR S  NRTLLLRLV SE+R WR RAA  +  QS  + E               P E        Y+    N   +  ++S        TD  IE  GD                 + +  ER  GG GE+ R  + P+   G G +R + K+  AG G  LNLS   +DDETL +VVRK+LR C   S      G + +  G    D +  + +  ++A++PL  LLLRGNN+TDAGAL LVPLV+ S  ++ +DLR N IG  G+ ALKKALT +P V+RV SE+  G+    G+   GG+VLR
Sbjct:  433 RHLAAQQCAEVRTELALALGRLSCRAMLVSDTRAAARRTSICNRTLLLRLVRSEMRLWRLRAAAAATEQSAREKEVLRTALTERGRPFFPPGEGDANPSTTYDKHPTNVCRSPDAESAAFTVNWGTDSEIEAAGDGXXXXXXXXXXXXXXYGDGEEIERSIGGRGER-RSRMQPKGNEGTGVERAKRKKRPAGAGFHLNLSGFDLDDETLHQVVRKLLRQCTDRSRAWPGAGAMYEQQGGAGEDGRNGQNTLSSSAIMPLRCLLLRGNNLTDAGALALVPLVEASSSLAAIDLRGNRIGTKGELALKKALTRSPWVYRVTSEEASGSDAREGSISTGGVVLR 773          
BLAST of mRNA_L-elsbetiae_contig122.1835.1 vs. uniprot
Match: A0A6H5KFK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK5_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.300e-37
Identity = 135/371 (36.39%), Postives = 186/371 (50.13%), Query Frame = 0
Query:    8 RSLAAQQCAQVRTELALALGRLSTRSSLVSNTQSAARRASTSNRTLLLRLVGSELRRWRERAATTSASQSREDAE-----------------------TTPDEDGVGADQQYENTDHTSTSQSTDGGIETEGDDLGAESDSSE---------------RRAGGSGEKQRLDLSPRKKMGLGAKR-RSKRSEAGTGAILNLSKVGVDDETLGRVVRKVLRACIHGS---------HGQLSQSDGDRQKHEESAKANAVVPLARLLLRGNNITDAGALLLVPLVKGSPHMSELDLRDNAIGASGKEALKK-----------------------------ALTSNPRVHRVVSEDLCGNLG--GTRGLGGLVLR 299
            R LAAQQCA+VRTELAL LGRLS R+ LVS+T++AARR S  NRT+LLRLV SE++ WR RAA     QS  + E                       +T D+      ++Y++ +  + + +     ETE                           R  GG GE+ R  + P+ K G G +R + K+  AG G  LNLS V +DD+TL +VVRK+LR C   S         H Q   +  D +  + +  ++ ++PL  LLLRGNN+TDAGA+ LVPLV+ S  ++ +DLR N I   G+ ALKK                             ALT +P V+RV SE++ G+    G+   GG+VLR
Sbjct:   80 RRLAAQQCAEVRTELALTLGRLSCRAMLVSDTRAAARRTSICNRTVLLRLVRSEMQLWRLRAAAAELQQSSNEKEAMRTAQAEQGGLFFSPGEGDANPSTSDDKHPANVRRYQDAERAAVTMNWGTDSETEXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKGGRGER-RSRIQPKGKEGTGFERAQRKKHPAGAGFTLNLSGVDLDDQTLHQVVRKLLRQCTDRSRAWSGAGAMHEQQGGAGKDGRNGQNTLSSSTIMPLRCLLLRGNNLTDAGAIALVPLVEASCSLAAIDLRGNRIETKGELALKKVMACGVTGGRATKRSLEHRIMFEESLNQGALTRSPWVYRVTSEEVSGSDAREGSTSTGGVVLR 449          
BLAST of mRNA_L-elsbetiae_contig122.1835.1 vs. uniprot
Match: A0A7S1TRJ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRJ7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.050e-5
Identity = 38/113 (33.63%), Postives = 56/113 (49.56%), Query Frame = 0
Query:  166 LNLSKVGVDDETLGRVVRKVLRACIHGSHGQLSQSDGDRQKHEESAKANAVVPLARLLLRGNNITDAGALLLVPLVKGSPHMSELDLRDNAIGASGKEALKKALTSNPRVHRV 278
            + L +  +DD +   +V  +L      +H  L   D   + H++         L  ++LRGN +T AGAL L  LV  S  +  LDLRD  IG  G +AL++AL  N  V +V
Sbjct:  758 IRLPQCLIDDHSAHGIVHLIL-GPEEDAHRLLLDGDDAVETHKDD--------LGMIVLRGNELTSAGALALARLVSASHTLRSLDLRDCRIGERGIKALEEALALNGSVRKV 861          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig122.1835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0E3_ECTSI1.390e-4742.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFK5_9PHAE1.300e-3736.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TRJ7_9STRA7.050e-533.63Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 219..243
e-value: 88.0
score: 3.4
coord: 244..271
e-value: 0.0032
score: 26.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 219..278
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 164..296
e-value: 2.8E-10
score: 41.4
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 244..265
e-value: 0.04
score: 14.0
coord: 224..237
e-value: 0.6
score: 10.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig122contigL-elsbetiae_contig122:53755..56046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig122.1835.1mRNA_L-elsbetiae_contig122.1835.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig122 53755..56046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig122.1835.1 ID=prot_L-elsbetiae_contig122.1835.1|Name=mRNA_L-elsbetiae_contig122.1835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
CLASTPVRSLAAQQCAQVRTELALALGRLSTRSSLVSNTQSAARRASTSN
RTLLLRLVGSELRRWRERAATTSASQSREDAETTPDEDGVGADQQYENTD
HTSTSQSTDGGIETEGDDLGAESDSSERRAGGSGEKQRLDLSPRKKMGLG
AKRRSKRSEAGTGAILNLSKVGVDDETLGRVVRKVLRACIHGSHGQLSQS
DGDRQKHEESAKANAVVPLARLLLRGNNITDAGALLLVPLVKGSPHMSEL
DLRDNAIGASGKEALKKALTSNPRVHRVVSEDLCGNLGGTRGLGGLVLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt