prot_L-elsbetiae_contig12189.1819.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12189.1819.1
Unique Nameprot_L-elsbetiae_contig12189.1819.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length367
Homology
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BLAST of mRNA_L-elsbetiae_contig12189.1819.1 vs. uniprot
Match: D7G4A8_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A8_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 1.370e-130
Identity = 251/362 (69.34%), Postives = 272/362 (75.14%), Query Frame = 0 
Query:   22 VARARWLTGGAQLALWAAVVLAYANLSLRLCRSGDGSGRTVAGYMAALRTLAAKKRGTGGWVRIDRWAKGGXXXXXXXXXXXXXXXXXXDNSRPRAHSLLGSLYETLVSGGGWRGGGRIGPGAMALSQYQTMDDSGPPFERGEVTVRSIYCFGLDAAITGRPPSASLNXXXXXXXXXXXXXXXXXXXXXXX--------GGASRPFYVTITLGSVTAKTSPRPGFSPSFTEVFPLGCDCPIRGAFLTITVVDSFESGRSGRGDRVVGEVHLPLDAAQLVPGTSS--------HGGDPXXXXXXXXXSAYRLSGDWELQGALGGSLGGARVGADVVIHGPPSPSSAAGRLRRRR-ESVGWYAR 366
            VARARWLT GAQL LWAAVVLAYAN+SLRL R   G  +TV GYM+ALR+LAAKKRGTGGWVRID+W  G      XXXXXXXXXXXXX     RA+ LLGSLYETL+        GRI P AMAL Q+Q   D GPPFERGEVTVRSIYC GLDA+ITGRPPS   +        XXXXXXXXXXXXXXX        GG+SRPFYVT++LG +TAKTS R GFSP+FTEVFPLGCDCPIRGA+LTI VVDSFE+GRSGRGDRVVGEVHLPL+AAQLVPGTS                        AYRL GDWELQGALGG L GARVGAD+++HGPPSPSSAAGRLRRRR ESVGWYAR
Sbjct:  218 VARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPPG--KTVGGYMSALRSLAAKKRGTGGWVRIDQWGTG------XXXXXXXXXXXXXXXXXARANGLLGSLYETLMGXXXXXXXGRICPEAMALCQHQKSYD-GPPFERGEVTVRSIYCSGLDASITGRPPSNGNSVGGVGVGGXXXXXXXXXXXXXXXXXXGGLIAGGSSRPFYVTVSLGGLTAKTSARQGFSPTFTEVFPLGCDCPIRGAYLTIAVVDSFETGRSGRGDRVVGEVHLPLEAAQLVPGTSGLDDNADMFSSSSSSGGWDGGSGPAYRLRGDWELQGALGGPLCGARVGADIMVHGPPSPSSAAGRLRRRRRESVGWYAR 570
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12189.1819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4A8_ECTSI1.370e-13069.34C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 164..298
e-value: 0.0029
score: 26.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12189contigL-elsbetiae_contig12189:201..2941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12189.1819.1mRNA_L-elsbetiae_contig12189.1819.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12189 98..4095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12189.1819.1 ID=prot_L-elsbetiae_contig12189.1819.1|Name=mRNA_L-elsbetiae_contig12189.1819.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=367bp
MVSGGGRRRSAAAAAAAAESAVARARWLTGGAQLALWAAVVLAYANLSLR
LCRSGDGSGRTVAGYMAALRTLAAKKRGTGGWVRIDRWAKGGGGPVPGGG
GGGAGGGGGGDNSRPRAHSLLGSLYETLVSGGGWRGGGRIGPGAMALSQY
QTMDDSGPPFERGEVTVRSIYCFGLDAAITGRPPSASLNNGGGGADHGGG
GGGGGGGGGIIAGGASRPFYVTITLGSVTAKTSPRPGFSPSFTEVFPLGC
DCPIRGAFLTITVVDSFESGRSGRGDRVVGEVHLPLDAAQLVPGTSSHGG
DPSSGGGGGGGSAYRLSGDWELQGALGGSLGGARVGADVVIHGPPSPSSA
AGRLRRRRESVGWYAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom