prot_L-elsbetiae_contig12186.1818.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12186.1818.1
Unique Nameprot_L-elsbetiae_contig12186.1818.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length45
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig12186.1818.1 vs. uniprot
Match: D7G0P2_ECTSI (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.330e-16
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:    1 MMVESMKTGKVDGVPVIFVLDVFERFTCRKPQTLLYALLDLCQ 43
            MMV+SMKTG V+GVPV+FVLD FERF CRKPQTLLYALLDLCQ
Sbjct:  164 MMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQ 206
[Close]
BLAST of mRNA_L-elsbetiae_contig12186.1818.1 vs. uniprot
Match: A0A6H5JJU9_9PHAE (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.380e-16
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:    1 MMVESMKTGKVDGVPVIFVLDVFERFTCRKPQTLLYALLDLCQ 43
            MMV+SMKTG V+GVPVIF+LD FERF CRKPQTLLYALLDLCQ
Sbjct:  202 MMVDSMKTGAVNGVPVIFILDEFERFACRKPQTLLYALLDLCQ 244
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12186.1818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0P2_ECTSI5.330e-1686.05Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
A0A6H5JJU9_9PHAE5.380e-1686.05Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12186contigL-elsbetiae_contig12186:4722..4856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12186.1818.1mRNA_L-elsbetiae_contig12186.1818.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12186 4716..4856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12186.1818.1 ID=prot_L-elsbetiae_contig12186.1818.1|Name=mRNA_L-elsbetiae_contig12186.1818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=45bp
MMVESMKTGKVDGVPVIFVLDVFERFTCRKPQTLLYALLDLCQVR
back to top