prot_L-elsbetiae_contig12157.1796.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12157.1796.1
Unique Nameprot_L-elsbetiae_contig12157.1796.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length277
Homology
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BLAST of mRNA_L-elsbetiae_contig12157.1796.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 2.970e-112
Identity = 185/281 (65.84%), Postives = 209/281 (74.38%), Query Frame = 0 
Query:    1 FADTFVFYVKKPP---RKCRAYHADTV-SSNNTSRILLTGEGPGIAAPKAMEWGAELTGVHRQYQFWGYLDPFPTLFDLVPSGRKYYTKTNPAMVHHNCNPLSAFHQDNVWLSFK-EEEKAMNEDDHANGGGGSTTHPLYCGPPRVSGVDLTVDRRPADFEDEPEEAKQHIMSKLVANAMEQLSRMCWAANWALTEKEQAQPSAVLAKQGRPRGPVDVRLNFVVGDAVDTCDALCLLSSEGLNAWGKARDGDESGRVCSFMPNMSLAPSHLELRDVDGPAR 276
            +ADT +  +K      ++ + YH  TV  S N S ILLTGEGPGIAAPKAMEWG E+TG+HRQYQ WGYLDPFP    L    R+Y        VHH CNPLSAFH D+VWL FK  E ++ ++    N  G S   PLY GPPRV+GVDLTV   P +FEDEPEEAKQHIMSKLVA ++EQLSRMCWA NWA  EKEQ+  SA LAKQGRPR PVDVR+NFV+GDAVDTCDA+CLLSSEGL AWGKARDG E GRVCSFMPNMSL+P  LEL D+DGPAR
Sbjct:  233 YADTSIVQIKPKKQLDKERKTYHDRTVFPSKNASPILLTGEGPGIAAPKAMEWGTEMTGIHRQYQSWGYLDPFPV---LRGGARRY-----EGGVHHKCNPLSAFHHDDVWLPFKPREHESTHDGGRFNMTGSSGCMPLYAGPPRVTGVDLTVTESPLEFEDEPEEAKQHIMSKLVATSLEQLSRMCWAVNWARLEKEQSS-SAALAKQGRPRPPVDVRMNFVLGDAVDTCDAMCLLSSEGLAAWGKARDGHEPGRVCSFMPNMSLSPCQLELADLDGPAR 504
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12157.1796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE2.970e-11265.84DUF4470 domain-containing protein (Fragment) n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12157contigL-elsbetiae_contig12157:1144..5620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12157.1796.1mRNA_L-elsbetiae_contig12157.1796.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12157 1144..5620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12157.1796.1 ID=prot_L-elsbetiae_contig12157.1796.1|Name=mRNA_L-elsbetiae_contig12157.1796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
FADTFVFYVKKPPRKCRAYHADTVSSNNTSRILLTGEGPGIAAPKAMEWG
AELTGVHRQYQFWGYLDPFPTLFDLVPSGRKYYTKTNPAMVHHNCNPLSA
FHQDNVWLSFKEEEKAMNEDDHANGGGGSTTHPLYCGPPRVSGVDLTVDR
RPADFEDEPEEAKQHIMSKLVANAMEQLSRMCWAANWALTEKEQAQPSAV
LAKQGRPRGPVDVRLNFVVGDAVDTCDALCLLSSEGLNAWGKARDGDESG
RVCSFMPNMSLAPSHLELRDVDGPAR*
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