prot_L-elsbetiae_contig12154.1792.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig12154.1792.1
Unique Name	prot_L-elsbetiae_contig12154.1792.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	266

Homology

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BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A3G5FPT6_9PHAE (Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPT6_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 5.630e-174
Identity = 234/265 (88.30%), Postives = 246/265 (92.83%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFKNRYKSCLWSRTNIWGDLLAKE TFLRPKWD+IIAILRSQ+RRHRPLVNI RYRHPICH+YK L+PRTRANQVFKYNRFGYRNTLSL+FCLRRFYGDL HK FKN CKP F L+DP Q+LL SLEGRLDM LYRLGFFHSIYYSRQAILHNKVLVNGEKIG+G FILQKGD+VEFC T R+AIR RLVARYKRFRSS VRLER  LSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVP++YPFRAN DEALWASKYGYL
Sbjct:    1 MRFKNRYKSCLWSRTNIWGDLLAKEHTFLRPKWDTIIAILRSQRRRHRPLVNIYRYRHPICHNYKLLKPRTRANQVFKYNRFGYRNTLSLVFCLRRFYGDLSHKGFKNFCKPFFKLRDPSQRLLSSLEGRLDMSLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGSFILQKGDLVEFCPTQRSAIRARLVARYKRFRSSMVRLERSNLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPIVYPFRANFDEALWASKYGYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: E6ZEQ6_ECTSI (Ribosomal protein S4 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ6_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 1.320e-172
Identity = 229/265 (86.42%), Postives = 241/265 (90.94%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MR KNRYKSCLWSRTNIWGDLL+KEKTFLRPKWDSIIAILRSQKRRHRPL+NI+RYRHPICHDY+FL+PRTR NQVFKYNR GYRNTLSLL CL+RFYGDLGHKAFK  C+  F  KD   KLL SLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNG+KIGHGGF+LQKGD VEFC T RAAIR RLVARYKRFRS HVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSD C   ++PFRAN+DEALW SKYGYL
Sbjct:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGKKIGHGGFVLQKGDFVEFCPTQRAAIRARLVARYKRFRSPHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDACAFALFPFRANIDEALWVSKYGYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A089MX47_PETFA (Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089MX47_PETFA)

HSP 1 Score: 480 bits (1236), Expect = 1.270e-170
Identity = 223/265 (84.15%), Postives = 248/265 (93.58%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFKN+YKSCLWSRTNIWGDLLAKE+TFLRPKWDS+IAILRSQKRRHRPLVNI+RYRHPICHDY++L+PR+RANQVFKYNR GYRNTLSLL CLRRFYGDL HK+FKN C PAF  KDP Q LL +LEGRLD+CLYRLGFFHSIYYSRQAILHNKVL+NG+KIGH GFILQKGD VEFCS+ R AI+ RLVAR+KRFRSS++RLERWRLSHRYKL+LHLQPTPKWIQTDYSNLSFI+SS+V VP++YPFRAN+DEALWASKY Y+
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNINRYRHPICHDYRYLKPRSRANQVFKYNRVGYRNTLSLLLCLRRFYGDLSHKSFKNFCHPAFKSKDPSQNLLSALEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFILQKGDFVEFCSSQRPAIKARLVARFKRFRSSYIRLERWRLSHRYKLQLHLQPTPKWIQTDYSNLSFIISSEVGVPVMYPFRANIDEALWASKYAYI 265

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BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A0U1V7R9_9PHAE (Ribosomal protein S4 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1V7R9_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 6.020e-169
Identity = 221/265 (83.40%), Postives = 244/265 (92.08%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFKN+YKSCLWSRTNIWGDLLAKE+TFLRPKWDS+IAILRSQKRRHRPLVNIDRYRHPICHDYK+L+PR+RANQVFKYNR GYRNTLS+LFCLRRFYGDL HK FKN CKPA   KDP Q LL SLEGRLD+CLYRLGFFHSIYYSRQAILHNKVL+NG+KIGH GF+LQKGD VEFC + R AI+ RLVAR+KRFRSS++RLERWRLSHRYKL+LHLQPTP WIQTDY +LSFI+ S+V VP++YPFRAN+DEALWASKY YL
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNIDRYRHPICHDYKYLKPRSRANQVFKYNRIGYRNTLSILFCLRRFYGDLNHKMFKNFCKPALKSKDPSQMLLNSLEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFVLQKGDYVEFCPSQRGAIKARLVARFKRFRSSYIRLERWRLSHRYKLQLHLQPTPNWIQTDYPSLSFIVCSEVGVPVMYPFRANIDEALWASKYSYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A0U1V7B3_SCYLO (Ribosomal protein S4 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1V7B3_SCYLO)

HSP 1 Score: 475 bits (1222), Expect = 1.730e-168
Identity = 220/265 (83.02%), Postives = 248/265 (93.58%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFKN+YKSCLWSRT+IWGDLLAKE+TFLRPKWDS+IAILRSQKRRHRPLVNI+RYRH +CH+YK+++PR+RANQVFKYNR GYRNTLSLLFCLRRFYGDL HK+FKN C+PAF  KDP QKLL +LEGRLD+CLYRLGFFHSIYYSRQAILHNKVL+NG+KIGH  F+LQKGD VEFC + R+AIRTRLVARYKRFRSS++RLERWRLSH+YKL+LHLQPTP WIQTDYSNLSFILSS+V  P++YPFRANVDEALWASKY Y+
Sbjct:    1 MRFKNKYKSCLWSRTDIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNINRYRHRLCHNYKYIKPRSRANQVFKYNRVGYRNTLSLLFCLRRFYGDLSHKSFKNFCRPAFKSKDPSQKLLSALEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCCFVLQKGDYVEFCPSQRSAIRTRLVARYKRFRSSYIRLERWRLSHKYKLQLHLQPTPNWIQTDYSNLSFILSSEVSTPVMYPFRANVDEALWASKYSYI 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A8F0FCX2_9PHAE (Ribosomal protein S4 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCX2_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 7.500e-163
Identity = 217/265 (81.89%), Postives = 241/265 (90.94%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFK+RYKSCLWSRT+IWGDLL KEKTFLRPKWD+I+ IL SQKRRHRPLVNI+RYR+P+CHDYKFL+PR RANQ+FKYNR GYRNTLSLLFCLRRFYGDL HK+FK  C+  F LKDP QKLLG+LEGRLD+ LYRLGFFHSI+YSRQAILH+KVLVNGEKIG+GGFILQKGD VEFC   R AIR RL+ARYK FRS+ VRLERWRLS R+K ELHLQPTPKWI TDYSNLSFILSS+VCVP+++PFRA+VDEALWASKYGYL
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLGKEKTFLRPKWDTIMGILGSQKRRHRPLVNINRYRYPLCHDYKFLKPRARANQIFKYNRRGYRNTLSLLFCLRRFYGDLSHKSFKKFCRSMFALKDPSQKLLGALEGRLDITLYRLGFFHSIFYSRQAILHHKVLVNGEKIGYGGFILQKGDYVEFCPLQRPAIRARLLARYKHFRSAEVRLERWRLSPRFKYELHLQPTPKWIHTDYSNLSFILSSEVCVPIMFPFRADVDEALWASKYGYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: Q94Z19_PYLLI (Ribosomal protein S4 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z19_PYLLI)

HSP 1 Score: 458 bits (1179), Expect = 6.160e-162
Identity = 211/265 (79.62%), Postives = 240/265 (90.57%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFK++YKSCLWSRTNIWGDLLAKE TFL PKWDS+IAILRSQKRRHRPLVNI+RYRHPIC DY FLQPR+R+NQVFKYNR GYRNTLS +FCLRRFYGDL HK+FK+LC+P+F LK+P   LLG+LEGRLD+CLYRLGFFHSIYYSRQAI HNK++VNG+K+GH GF+L+KGD VEFC T R+AIR RL+ARYKRFRSS VR  RWRL+HRYKL+L LQPTPKWIQTDYS+LSF+LSS +C P +YPFR N+DEALWASKYGYL
Sbjct:    1 MRFKHKYKSCLWSRTNIWGDLLAKEHTFLSPKWDSMIAILRSQKRRHRPLVNINRYRHPICRDYHFLQPRSRSNQVFKYNRIGYRNTLSSIFCLRRFYGDLSHKSFKSLCQPSFKLKNPSLDLLGTLEGRLDICLYRLGFFHSIYYSRQAIQHNKIIVNGKKMGHSGFVLKKGDYVEFCPTQRSAIRARLIARYKRFRSSDVRSVRWRLAHRYKLQLQLQPTPKWIQTDYSSLSFLLSSSICPPFMYPFRVNLDEALWASKYGYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: W5RG02_COSCS (Ribosomal protein S4 n=9 Tax=Laminariales TaxID=2886 RepID=W5RG02_COSCS)

HSP 1 Score: 458 bits (1178), Expect = 8.740e-162
Identity = 211/265 (79.62%), Postives = 239/265 (90.19%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFK+RYKSCLWSRT+IWGDLL+KEKTFLRPKWDSII +L SQKRRHRPL NI+RYRHP+CHDY F++PR R NQ+FKYNR  YRNTLSLL C+RRFYGDL HKAFK  C+P  +LK P QKL+GSLEGRLD+ LYRLGFFHSIYYSRQAILHNKVLVNGEKIG+GGFILQKGD VEFC + R+AIR RLVARYKRFRS HV+LERWRLS+R+K EL+L PTPKW+QTDYSNLSFILSSD+C P++YPFR +VDEALWAS+YG+L
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFVKPRVRPNQIFKYNRLSYRNTLSLLLCIRRFYGDLSHKAFKRFCQPLVSLKTPAQKLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGGFILQKGDFVEFCPSQRSAIRARLVARYKRFRSFHVKLERWRLSNRFKFELYLYPTPKWVQTDYSNLSFILSSDICAPVMYPFRVDVDEALWASRYGHL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: S4S3Q3_LAMHY (Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2886 RepID=S4S3Q3_LAMHY)

HSP 1 Score: 456 bits (1174), Expect = 3.560e-161
Identity = 210/265 (79.25%), Postives = 238/265 (89.81%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFK+RYKSCLWSRT+IWGDLL+KEKTFLRPKWDSII +L SQKRRHRPL NI+RYRHP+CHDY FL+PR R NQ FKYNR  YRNTLS+L  +RRFYGDL HKAFK  C+P  +LK+P QKL+G+LEGRLD+ LYRLGFFHSIYYSRQ+I HNKVLVNG+KIGHGGFILQKGD VEFC + R+AIR RLVARYKRFRSSHV+LERWRLS+R+K ELHLQPTPKW+QTDYSNLSFILSSDVC P++YPFR +VDEALW+S+Y YL
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFLKPRVRPNQTFKYNRISYRNTLSILLSIRRFYGDLSHKAFKRFCQPLVSLKNPPQKLIGALEGRLDISLYRLGFFHSIYYSRQSIFHNKVLVNGKKIGHGGFILQKGDYVEFCPSQRSAIRARLVARYKRFRSSHVKLERWRLSNRFKFELHLQPTPKWVQTDYSNLSFILSSDVCAPVMYPFRVDVDEALWSSRYSYL 265

[Close]

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Match: A0A8F0K0K8_9PHAE (Ribosomal protein S4 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0K8_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 3.560e-161
Identity = 209/265 (78.87%), Postives = 240/265 (90.57%), Query Frame = 0

Query:    1 MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPLVNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGDLGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSSHVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFRANVDEALWASKYGYL 265
            MRFK+RYKSCLWSRT+IWGDLL+K+KTFLRPKWDSII +L SQKRRHRPL NI+RYR+P+CHDY FL+PR R NQ+FKYNR  YRNTLSLL C+RRFYGDL HKAFKN CK   +LK+P QKL+G+LEGRLD+ LYRLGFFHSIYYSRQAILH+KVLVNG++IGHGGFILQKGD VEFC + R++IR RLV RYKRFRSS+V+LERWRLS+R+K +LHL PTPKW+QTDYSNLSFI+SSDVCVP+IYPFR +VDEALW SKYGYL
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKDKTFLRPKWDSIIGVLSSQKRRHRPLANINRYRYPLCHDYNFLKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLNHKAFKNFCKSLVSLKNPPQKLIGALEGRLDVSLYRLGFFHSIYYSRQAILHSKVLVNGKRIGHGGFILQKGDFVEFCPSQRSSIRARLVGRYKRFRSSYVKLERWRLSNRFKFDLHLHPTPKWVQTDYSNLSFIMSSDVCVPVIYPFRVDVDEALWCSKYGYL 265

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig12154.1792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3G5FPT6_9PHAE	5.630e-174	88.30	Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranu...	[more]
E6ZEQ6_ECTSI	1.320e-172	86.42	Ribosomal protein S4 n=2 Tax=Ectocarpus siliculosu...	[more]
A0A089MX47_PETFA	1.270e-170	84.15	Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxI...	[more]
A0A0U1V7R9_9PHAE	6.020e-169	83.40	Ribosomal protein S4 n=1 Tax=Colpomenia peregrina ...	[more]
A0A0U1V7B3_SCYLO	1.730e-168	83.02	Ribosomal protein S4 n=1 Tax=Scytosiphon lomentari...	[more]
A0A8F0FCX2_9PHAE	7.500e-163	81.89	Ribosomal protein S4 n=2 Tax=Laminariales TaxID=28...	[more]
Q94Z19_PYLLI	6.160e-162	79.62	Ribosomal protein S4 n=1 Tax=Pylaiella littoralis ...	[more]
W5RG02_COSCS	8.740e-162	79.62	Ribosomal protein S4 n=9 Tax=Laminariales TaxID=28...	[more]
S4S3Q3_LAMHY	3.560e-161	79.25	Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2...	[more]
A0A8F0K0K8_9PHAE	3.560e-161	78.87	Ribosomal protein S4 n=3 Tax=Laminariales TaxID=28...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 129..187 e-value: 8.9E-10 score: 48.5
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 130..176 e-value: 9.4E-11 score: 41.3
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 129..195 score: 12.936
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 130..239 e-value: 4.7E-14 score: 54.3
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 104..259
IPR005709	Ribosomal protein S4, bacterial-type	PANTHER	PTHR11831:SF4	37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL	coord: 104..259
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 39..262

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig12154	contig	L-elsbetiae_contig12154:2200..2997 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig12154.1792.1	mRNA_L-elsbetiae_contig12154.1792.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig12154 2200..3592 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig12154.1792.1 ID=prot_L-elsbetiae_contig12154.1792.1|Name=mRNA_L-elsbetiae_contig12154.1792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
MRFKNRYKSCLWSRTNIWGDLLAKEKTFLRPKWDSIIAILRSQKRRHRPL
VNIDRYRHPICHDYKFLQPRTRANQVFKYNRFGYRNTLSLLFCLRRFYGD
LGHKAFKNLCKPAFNLKDPYQKLLGSLEGRLDMCLYRLGFFHSIYYSRQA
ILHNKVLVNGEKIGHGGFILQKGDVVEFCSTHRAAIRTRLVARYKRFRSS
HVRLERWRLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPLIYPFR
ANVDEALWASKYGYL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002942	S4_RNA-bd
IPR036986	S4_RNA-bd_sf
IPR022801	Ribosomal_S4/S9
IPR005709	Ribosomal_S4_bac-type