prot_L-elsbetiae_contig1214.1784.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1214.1784.1
Unique Nameprot_L-elsbetiae_contig1214.1784.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 2.370e-115
Identity = 191/284 (67.25%), Postives = 213/284 (75.00%), Query Frame = 0
Query:    1 MGLQASGALATGRLVARITIGVVGQGYN--------KGLEEAVGRVVRHSIPTLRWITIRGGVGQDGRARVAPIVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAGKAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQSSIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRACPNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDVELKALREAVASREPPVMLVSEIKTRL 276
            MGL+ASGALATGR + RITI  V +  N        K LE+AVGRVVRHSIPTLR ITIRG    +GRARV  I+GELV LS+KRHRVAPRL RV LV GATGVAKAG+AVAAGLWPALEVL+FSHCR NAGHF+DLA GLR+G AP LR L WDDQSS+R   VDDVIL AL+ G CP +E LSF  N  FCPE+SI YL++AL  CP LR L MDCSRTP  QL  L  AL  G +P+L+ L VRATAPY R SDVEL AL+ A ASR PPV L  +IKTRL
Sbjct:   22 MGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNR-FCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYRDSDVELLALKRAAASRSPPVELELQIKTRL 304          
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 2.530e-109
Identity = 183/276 (66.30%), Postives = 204/276 (73.91%), Query Frame = 0
Query:    1 MGLQASGALATGRLVARITIGVVGQGYNKGLEEAVGRVVRHSIPTLRWITIRGGVGQDGRARVAPIVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAGKAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQSSIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRACPNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDVELKALREAVASREPPVMLVSEIKTRL 276
            MGL ASGALATGR V RITI  V    +  LE+A+ RVV+HSIPTLR I IRG     GRARV  I+GELV LS+KRHRVAPRL RV LV GATGVAKAG+AVAAGLWPALEVL+FSHCR NAGHF+DLA GLR+G AP LR L WDDQSS+R   VDDVIL AL+ G CP +E LSF  N  FCPE+ I YL++ L  CP LR L MDCSRTP  QL  LA AL  G +P+L+ L VRATA Y R SDVEL AL+ A ASR PPV L  +IKT L
Sbjct:   26 MGLDASGALATGRAVVRITITYVHHFQDPALEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNR-FCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTLL 300          
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.480e-103
Identity = 184/303 (60.73%), Postives = 209/303 (68.98%), Query Frame = 0
Query:    1 MGLQASGALATGRLVARITIGVVGQGYNKGLEEAVGRVVRHSIPTLRWITIRGGVGQDGRARV-------------------------AP--IVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAGKAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQSSIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRACPNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDVELKALREAVASREPPVMLVSEIKTRL 276
            MG+ ASGALATGR V RITI  V +  +  LE+A+ RVV+HSIPTLR ITIRG     GRAR                          AP  I+GELV LS+KRHRVAPRL RV LV GATGVAKAG+AVA GLWPALEVL+FSHCR NAGHF+DLA GLR+G AP LR L WDDQSSIR   VDDVIL+AL+ G CP +E LSF  N  FCPE+ I YL++ L  CP LR L MDCSRTP  +L  LA AL  G +P+L+ L VRATAPY R SDVEL+AL+   ASR PPV L  +IKTRL
Sbjct:  146 MGIDASGALATGRAVVRITITHVHETQDPALEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGPDAPGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNR-FCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYRDSDVELRALKRVAASRSPPVELELQIKTRL 447          
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 2.550e-92
Identity = 185/359 (51.53%), Postives = 207/359 (57.66%), Query Frame = 0
Query:    1 MGLQASGALATGRLVARITIGVVGQGYNKGLEEAVGRVVRHSIPTLRWITIRGGVGQDGRARV--------------------------------------------------------------------------AP---------IVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAGKAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQSSIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRACPNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDVELKALREAVASREPPVMLVSEIKTRL 276
            MGL ASGALATGR V RITI  V    +  LE+A+ RVV+HSIPTLR I IR     +GRARV                                                                          AP         I+GELV LS+KRHRVAPRL RV LV GATGVAKAG+AVAAGLWPALEVL+FSHCR NAGHF+DLA GLR+G AP LR L WDDQSS+R   VDDVIL AL+ G CP +E LSF  N  FCPE+ I YL++ L  CP LR L MDCSRTP  QL  LA AL  G +P+L+ L VRATA Y R SDVEL AL+ A ASR PPV L  +IKTRL
Sbjct:  164 MGLDASGALATGRAVVRITITHVLHAQDPALEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNR-FCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVELLALKRAAASRSPPVELELQIKTRL 521          
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 2.850e-81
Identity = 142/217 (65.44%), Postives = 158/217 (72.81%), Query Frame = 0
Query:   60 RARVAPIVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAGKAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQSSIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRACPNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDVELKALREAVASREPPVMLVSEIKTRL 276
            R RV  I GELV LS+KRHRVA RL RV LV GATG AKAGKAVAAGL PALEV +FSHCR NAGHF+DLA GLR+G AP LR L WDDQS+IR   +DDVIL AL+ G CP +E LSF     FCPE+SI YL++    CP LR L MDCSRTP  QL  LA AL    +P+L+ L VRATAPY R SDVEL AL+ A ASR PPV L  +IKTRL
Sbjct:   11 RPRVGAIRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTR-FCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYRDSDVELLALKLAAASRSPPVALELQIKTRL 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1214.1784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LAY2_ECTSI2.370e-11567.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWR8_ECTSI2.530e-10966.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDB3_9PHAE2.480e-10360.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR9_ECTSI2.550e-9251.53Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU71_9PHAE2.850e-8165.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 83..265
e-value: 2.4E-9
score: 38.4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 109..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1214contigL-elsbetiae_contig1214:8507..9617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1214.1784.1mRNA_L-elsbetiae_contig1214.1784.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1214 8507..9632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1214.1784.1 ID=prot_L-elsbetiae_contig1214.1784.1|Name=mRNA_L-elsbetiae_contig1214.1784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MGLQASGALATGRLVARITIGVVGQGYNKGLEEAVGRVVRHSIPTLRWIT
IRGGVGQDGRARVAPIVGELVLLSSKRHRVAPRLKRVELVAGATGVAKAG
KAVAAGLWPALEVLSFSHCRGNAGHFKDLADGLRAGRAPFLRALEWDDQS
SIRKRPVDDVILSALAGGMCPRLESLSFKDNHLFCPEYSIFYLKDALRAC
PNLRVLAMDCSRTPCRQLHDLARALRKGWMPKLDFLYVRATAPYRRSSDV
ELKALREAVASREPPVMLVSEIKTRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf