prot_L-elsbetiae_contig12120.1773.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12120.1773.1
Unique Nameprot_L-elsbetiae_contig12120.1773.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
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BLAST of mRNA_L-elsbetiae_contig12120.1773.1 vs. uniprot
Match: D8LH71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH71_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 9.300e-6
Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 0 
Query:    1 MKAFTRALDQAVLPKPKLLELYGGSRLLDDSVDVVHVAGGRHAGLRSPSKSSMGSPARRPMK-------------RKAGSMSAAEEAPATAQALAK 83
            MKAFTRALDQA+LP+PKLL +Y         ++VV +  GR  GL+       GS ++ PM+             +    M A EE P TAQALAK
Sbjct:  215 MKAFTRALDQALLPRPKLLTMYSND---GSDMNVVDMTDGRQVGLQ-------GSTSKPPMRSXXXXXXXXXXXXKAVSPMPATEETPPTAQALAK 300
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12120.1773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH71_ECTSI9.300e-641.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12120contigL-elsbetiae_contig12120:4630..5529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12120.1773.1mRNA_L-elsbetiae_contig12120.1773.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12120 4133..5686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12120.1773.1 ID=prot_L-elsbetiae_contig12120.1773.1|Name=mRNA_L-elsbetiae_contig12120.1773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
MKAFTRALDQAVLPKPKLLELYGGSRLLDDSVDVVHVAGGRHAGLRSPSK
SSMGSPARRPMKRKAGSMSAAEEAPATAQALAKVCLVFSYKGFGRGGLPA
PPSSGFMEPGILR*
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