prot_L-elsbetiae_contig12103.1766.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12103.1766.1
Unique Nameprot_L-elsbetiae_contig12103.1766.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length50
Homology
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: D8LKW8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW8_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 7.430e-27
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDG+FNFVTILQ H
Sbjct:   74 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGSFNFVTILQAH 123          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A836CIR2_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.720e-18
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            K S NKQR PV  L+WAP G TRCITGNSSGEFTLWKDGAFNF  I+Q H
Sbjct:   74 KASVNKQRSPVNVLSWAPEGATRCITGNSSGEFTLWKDGAFNFERIMQAH 123          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A1Y3B3X5_EURMA (WD domain containing protein n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3B3X5_EURMA)

HSP 1 Score: 73.2 bits (178), Expect = 4.250e-15
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQV 49
            +TSTNK RCP+FC+ W P G  R ITG+SSGEFTLW    FNF TILQV
Sbjct:  106 RTSTNKMRCPIFCVLWTPEG-RRLITGSSSGEFTLWNGLTFNFETILQV 153          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A8J5N1T3_HOMAM (Pre-mRNA 3' end processing protein WDR33-like 1 n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5N1T3_HOMAM)

HSP 1 Score: 74.7 bits (182), Expect = 6.050e-15
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNK +CP+FCLAW P G  R +TG SSGEFTLW    FNF TILQ H
Sbjct:  113 RTSTNKAKCPIFCLAWTPEG-RRLVTGASSGEFTLWNGLTFNFETILQAH 161          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: B3RZA6_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RZA6_TRIAD)

HSP 1 Score: 75.9 bits (185), Expect = 7.620e-15
Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNKQRCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:  105 RTSTNKQRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 153          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A369S7C3_9METZ (Pre-mRNA 3' end processing protein WDR33 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S7C3_9METZ)

HSP 1 Score: 75.9 bits (185), Expect = 8.180e-15
Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNKQRCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:  105 RTSTNKQRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 153          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A2R5LNS0_9ACAR (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LNS0_9ACAR)

HSP 1 Score: 73.9 bits (180), Expect = 9.180e-15
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNK RCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:   79 RTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 127          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A293LLG7_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LLG7_ORNER)

HSP 1 Score: 73.9 bits (180), Expect = 9.600e-15
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNK RCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:  123 RTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 171          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: B7PE45_IXOSC (WD-repeat protein, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PE45_IXOSC)

HSP 1 Score: 73.9 bits (180), Expect = 9.880e-15
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNK RCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:  108 RTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 156          
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Match: A0A6G5ABE8_RHIMP (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ABE8_RHIMP)

HSP 1 Score: 73.9 bits (180), Expect = 1.000e-14
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH 50
            +TSTNK RCP+FC+ W P G  R ITG SSGEFTLW    FNF TILQ H
Sbjct:  124 RTSTNKMRCPIFCVVWTPEG-RRLITGASSGEFTLWNGLTFNFETILQAH 172          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12103.1766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW8_ECTSI7.430e-2796.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CIR2_9STRA1.720e-1876.00WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1Y3B3X5_EURMA4.250e-1567.35WD domain containing protein n=1 Tax=Euroglyphus m... [more]
A0A8J5N1T3_HOMAM6.050e-1566.00Pre-mRNA 3' end processing protein WDR33-like 1 n=... [more]
B3RZA6_TRIAD7.620e-1568.00Uncharacterized protein n=1 Tax=Trichoplax adhaere... [more]
A0A369S7C3_9METZ8.180e-1568.00Pre-mRNA 3' end processing protein WDR33 n=1 Tax=T... [more]
A0A2R5LNS0_9ACAR9.180e-1566.00Putative polyadenylation factor i complex subunit ... [more]
A0A293LLG7_ORNER9.600e-1566.00Uncharacterized protein (Fragment) n=1 Tax=Ornitho... [more]
B7PE45_IXOSC9.880e-1566.00WD-repeat protein, putative n=1 Tax=Ixodes scapula... [more]
A0A6G5ABE8_RHIMP1.000e-1466.00Putative polyadenylation factor i complex subunit ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12103contigL-elsbetiae_contig12103:362..511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12103.1766.1mRNA_L-elsbetiae_contig12103.1766.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12103 362..511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12103.1766.1 ID=prot_L-elsbetiae_contig12103.1766.1|Name=mRNA_L-elsbetiae_contig12103.1766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=50bp
KTSTNKQRCPVFCLAWAPAGVTRCITGNSSGEFTLWKDGAFNFVTILQVH
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