prot_L-elsbetiae_contig121.1761.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig121.1761.1
Unique Nameprot_L-elsbetiae_contig121.1761.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length388
Homology
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BLAST of mRNA_L-elsbetiae_contig121.1761.1 vs. uniprot
Match: A0A6H5KQA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA9_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 9.290e-69
Identity = 179/420 (42.62%), Postives = 221/420 (52.62%), Query Frame = 0 
Query:    1 MRPGPSAVRAFAAHPTPLLQRSLRGWISWPHREIPLLVKNVASSATQTVVTYGGRRRLSGTAGGGAGQGTFGK------DIADLNAEIEGFVGDLGDPDFDTTAPSGPRGDAQDASGNLRGKYTQPGAAQRETQSISAKQHRPRLTQADHPSVARITPGLDAEREQA-----DWLASLTTER----HRNANQTSGAKSNVLVLNGAACFVAGKLASTGEPQSDITKSMEAAAEECSLSLAVCTSNREDELLDRICEGGYDAIVYNPSGFSS-GFCIAGSGVFTTTTPVHP--TVALPSTTIHPDAIVQADGDKDALHGQQSMRSDSRQHCCRRGDFQRQVGNGSAIEYGLARARCPVVIVSPRDD-------TAPQTREPG--------QPAIGTISGFSGVVSYRLAMVAVASVLDGHR 387
            MRP P A    A     L  R++R WI  P     +L K   +       +        G  GG    G  G       DIADLN +I GFVGDLGDPDFDTT PS P   A+  SG+ R        A+RE    + ++ + RLT ADHP       GL  ER++      DW  S          R ++  S A+ +VLVLNG ACF+AG LASTGEP+  +  SME AA+E +LSL VCTSNREDELLDR+CEGGYDA+VYNPSGFS+ G  +    V  T  P H   T A P++    +A    +  +D     Q  R D  +H     +  R  G+GSA+EYGL RA CPVVI+SP  D           +R P         + A G I+GFSG VSYRLAM AV+SVLDG R
Sbjct:    1 MRP-PLAKTLAACKHLVLTDRAVRRWIGLPFSTTSMLAKRGGTCCFARSRSIATSTTSRGGKGGAPEDGERGSAEFWVHDIADLNKDISGFVGDLGDPDFDTT-PSPPP--ARAVSGSRRNAQ-----AEREDTPAAFQESQTRLTLADHPGKVE---GLAGERDEEIPMDDDWSTSFVKGYLEAVERKSSSGSRARRSVLVLNGPACFIAGTLASTGEPRGAVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRV----VVPTAAPTHQMMTDASPASNSSGNA-AHTEPAEDGFPQSQQSRVDDPRHKTWHDNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLQSTSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLDGFR 403
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BLAST of mRNA_L-elsbetiae_contig121.1761.1 vs. uniprot
Match: D7G4H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H9_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 2.580e-65
Identity = 185/421 (43.94%), Postives = 226/421 (53.68%), Query Frame = 0 
Query:    9 RAFAA--HPTPLLQRSLRGWISWPHREIPLLVKNVASSATQTVVTYGGRRRLSGTAG------GGAGQGTFG-------KDIADLNAEIEGFVGDLGDPDFDTTAPSGPRGDAQDASGNLRGKYTQPGAAQRETQSISAKQHRPRLTQADHPSVARITPGLDAEREQA-----DWLASLT-----TERHRNANQTSGAKSNVLVLNGAACFVAGKLASTGEPQSDITKSMEAAAEECSLSLAVCTSNREDELLDRICEGGYDAIVYNPSGFSSGFCIAGSGVFTTTTPVHPTV--ALPSTTIHPDAIVQADGDKDALHGQQSMRSDSRQHCCRRGDFQRQVGNGSAIEYGLARARCPVVIVSPRDD------TAPQT-REPG--------QPAIGTISGFSGVVSYRLAMVAVASVLDGHR 387
            +A AA  HP P   R++R WI      +P      +  A +    Y  RRR   TA       GGA +G           DIADLN +I GFVGDLGDPDFDT  PS P   A  ASG+ R        A+RE    + ++ +PRLT ADHP       GL  +R++      DW   L      TE  +N++    A+  VLVLNG ACF+AG LASTGEP+  +  SME AA+E +LSL VCTSNREDELLDR+CEGGYDA+VYNPSGFS+    A   V  T   +H T+  A P++     A+     D      QQS   + RQ      +  R  G+GSA+EYGL RA CPVVI+SP  D        P T R P         + A G I+GFSG VSYRLAM AV SVLDG R
Sbjct:    7 KALAACKHPVPT-DRAVRRWIG-----LPFNTTRSSVLAKRGGTCYFVRRRSIATATPPRWGKGGASEGDDRGSAAISVHDIADLNKDISGFVGDLGDPDFDTI-PSPPPDRA--ASGSRRDAQ-----AEREESPAAFQESQPRLTLADHPGKFE---GLHGQRDEEIPMDDDWSTPLVKGYLETEERKNSSGLR-ARRPVLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRA---VVPTAAQIHRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVDNPRQKTWD-DNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLPSTSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVWSVLDGSR 405
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig121.1761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQA9_9PHAE9.290e-6942.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4H9_ECTSI2.580e-6543.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036441Dehydroquinase, class II superfamilyGENE3D3.40.50.9100coord: 177..268
e-value: 3.4E-6
score: 28.3
IPR036441Dehydroquinase, class II superfamilySUPERFAMILY52304Type II 3-dehydroquinate dehydratasecoord: 184..256
IPR001874Dehydroquinase, class IIPFAMPF01220DHquinase_IIcoord: 186..255
e-value: 2.1E-5
score: 24.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig121contigL-elsbetiae_contig121:46629..49362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig121.1761.1mRNA_L-elsbetiae_contig121.1761.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig121 46409..49737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig121.1761.1 ID=prot_L-elsbetiae_contig121.1761.1|Name=mRNA_L-elsbetiae_contig121.1761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp
MRPGPSAVRAFAAHPTPLLQRSLRGWISWPHREIPLLVKNVASSATQTVV
TYGGRRRLSGTAGGGAGQGTFGKDIADLNAEIEGFVGDLGDPDFDTTAPS
GPRGDAQDASGNLRGKYTQPGAAQRETQSISAKQHRPRLTQADHPSVARI
TPGLDAEREQADWLASLTTERHRNANQTSGAKSNVLVLNGAACFVAGKLA
STGEPQSDITKSMEAAAEECSLSLAVCTSNREDELLDRICEGGYDAIVYN
PSGFSSGFCIAGSGVFTTTTPVHPTVALPSTTIHPDAIVQADGDKDALHG
QQSMRSDSRQHCCRRGDFQRQVGNGSAIEYGLARARCPVVIVSPRDDTAP
QTREPGQPAIGTISGFSGVVSYRLAMVAVASVLDGHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036441DHquinase_II_sf
IPR001874DHquinase_II