prot_L-elsbetiae_contig12096.1757.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12096.1757.1
Unique Nameprot_L-elsbetiae_contig12096.1757.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length210
Homology
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 3.530e-62
Identity = 145/207 (70.05%), Postives = 163/207 (78.74%), Query Frame = 0
Query:    4 SVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPLEEEEGKAYRVTVLSLLYKGRGADLDRMARLVNKNTFGGASAGRGVGEEEDTADGGPVGVALDGRLPSRKEIGQLTQLCFTKAAEV 210
            S+C+CGL ELDPSLRLLP VRRLS+AHNRLSRVDF QDC SLE LDLSHNRL SVEN+HAV+GNLRSL    XXXXXXXXXXXXXXXXXXXXXXXX   L+EA RLSTLP++RRVWL GNP+E EEGK YRV+VLSLLY+G G +L   A  V+    GG+  G G G E         G+ALDGRLPSRKE+ QL+QLCF +AAEV
Sbjct:  561 SICKCGLRELDPSLRLLPRVRRLSMAHNRLSRVDFFQDCGSLEVLDLSHNRLTSVENIHAVLGNLRSLKLRGXXXXXXXXXXXXXXXXXXXXXXXXIEDLKEAARLSTLPMLRRVWLNGNPVEAEEGKDYRVSVLSLLYQGWGGELKGAAGRVSTMFAGGS--GDGSGRE--------TGIALDGRLPSRKELVQLSQLCFPRAAEV 757          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 2.510e-55
Identity = 142/207 (68.60%), Postives = 161/207 (77.78%), Query Frame = 0
Query:    4 SVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPLEEEEGKAYRVTVLSLLYKGRGADLDRMARLVNKNTFGGASAGRGVGEEEDTADGGPVGVALDGRLPSRKEIGQLTQLCFTKAAEV 210
            SVC+CGL ELD SLRLLP VRRLSLA+NR SRVDF QDC SLE LDLSHNRL SVEN+HAV+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L+EA RLSTLP++RRVWL GNP+E EEGK YRV+VLSLLY+GRG +L  +A   +    GG+    G G   +T      G+ALDGRLPSRKE+ QL+QLCF +AAEV
Sbjct:  469 SVCKCGLRELDSSLRLLPRVRRLSLANNRFSRVDFFQDCGSLEVLDLSHNRLNSVENIHAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLKEAARLSTLPMLRRVWLNGNPVEAEEGKDYRVSVLSLLYQGRGGELKGVAGRFSTMLAGGS----GDGSRRET------GIALDGRLPSRKELVQLSQLCFPRAAEV 665          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A835YXQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.070e-14
Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 0
Query:    8 CGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPLEEEEG 130
            CG+   DPSLRLLP VR L L++NR+  ++F QDC  L  LDLSHN +  + +VH  +GN+ +L                                E+  RL  LP +  + L GNP+  ++G
Sbjct:  267 CGVKATDPSLRLLPAVRYLDLSYNRIEDLEFFQDCIKLNHLDLSHNSISCLVDVHLTLGNVHTLLLGSNAIRTTEGLERLLALEVLDLEHNRIFDDEDVARLGLLPCLAHLTLRGNPVARQKG 389          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A1D6JTJ8_MAIZE (Outer arm dynein light chain 1 protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6JTJ8_MAIZE)

HSP 1 Score: 64.3 bits (155), Expect = 1.380e-8
Identity = 37/125 (29.60%), Postives = 55/125 (44.00%), Query Frame = 0
Query:    1 AFSSVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPL 125
            ++ S    G++ +D SL+LLP    L L+ N+ ++VD LQ C  L  LDL  N L S+ ++  V   +  L                                 E   L TLPL++ +WLEGNP+
Sbjct:  178 SYVSCASNGVVLMDESLQLLPATETLDLSRNKFAKVDNLQKCTKLRNLDLGFNHLRSISSLSEVSSRIVKLVVRNNALTTVNGIENLKSLMGLDLSYNIISIFSELEILGTLPLLQNLWLEGNPI 302          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A1D6JTK2_MAIZE (Outer arm dynein light chain 1 protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6JTK2_MAIZE)

HSP 1 Score: 64.3 bits (155), Expect = 1.820e-8
Identity = 37/125 (29.60%), Postives = 55/125 (44.00%), Query Frame = 0
Query:    1 AFSSVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPL 125
            ++ S    G++ +D SL+LLP    L L+ N+ ++VD LQ C  L  LDL  N L S+ ++  V   +  L                                 E   L TLPL++ +WLEGNP+
Sbjct:  178 SYVSCASNGVVLMDESLQLLPATETLDLSRNKFAKVDNLQKCTKLRNLDLGFNHLRSISSLSEVSSRIVKLVVRNNALTTVNGIENLKSLMGLDLSYNIISIFSELEILGTLPLLQNLWLEGNPI 302          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: UPI00053FF5C9 (uncharacterized protein LOC104901365 isoform X1 n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FF5C9)

HSP 1 Score: 63.9 bits (154), Expect = 2.560e-8
Identity = 40/121 (33.06%), Postives = 55/121 (45.45%), Query Frame = 0
Query:    6 CRC-GLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPL 125
            C C GL+ +D SL+LLP V  L L+ N+ ++VD L+ C  L  LDL  N+L SV +   V   +  L                                 E   LS+LP ++ +WLEGNPL
Sbjct:  175 CACNGLILMDESLQLLPAVETLDLSRNKFAKVDNLRKCTRLTHLDLGFNQLRSVASFGEVTYRILKLVLRNNALTTLRGIENLKSIEGLDVSYNIISNYVELEVLSSLPSLKNIWLEGNPL 295          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: C5WSP2_SORBI (Uncharacterized protein n=14 Tax=Andropogoneae TaxID=147429 RepID=C5WSP2_SORBI)

HSP 1 Score: 62.8 bits (151), Expect = 6.340e-8
Identity = 36/125 (28.80%), Postives = 55/125 (44.00%), Query Frame = 0
Query:    1 AFSSVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPL 125
            ++ S    G++ +D SL+LLP +  L L+ N+ ++VD LQ C  L  LDL  N L S+ ++  V   +  L                                 E   L TL L++ +WLEGNP+
Sbjct:  178 SYVSCASNGVVLMDESLQLLPAIETLDLSRNKFAKVDNLQKCTKLRNLDLGFNHLRSISSLSEVSSRIVKLVVRNNALTTVNGIENLKSLMGLDLSYNIISNFSELEMLGTLSLLQNLWLEGNPI 302          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A8B9T151_ANAPL (Nischarin n=2 Tax=Anatinae TaxID=2068716 RepID=A0A8B9T151_ANAPL)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-7
Identity = 61/114 (53.51%), Postives = 83/114 (72.81%), Query Frame = 0
Query:   12 ELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPL 125
            ++D S++L+P +  L L+HN +S V+ LQ   +L  LDLS+N+L S+E VH  +GN++  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++E   + +LP + +V L  NPL
Sbjct:  278 QIDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEQIDEVKNIGSLPCLEKVILSSNPL 391          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: A0A0K9P8F5_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P8F5_ZOSMR)

HSP 1 Score: 57.8 bits (138), Expect = 2.960e-6
Identity = 42/149 (28.19%), Postives = 64/149 (42.95%), Query Frame = 0
Query:    2 FSSVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPLEEEEGKAYRVTVLSLLYKGRGADLD 150
            F S    GL+ +D SL+LL  V  L L+ N++S+ D L +C  L  LDL  N L ++ ++  +   +  L                                 E   LSTLP ++ +WLEGNP+     + YR  V S  ++    +LD
Sbjct:  172 FVSCASNGLVLMDESLQLLTAVETLDLSRNKISKPDNLGNCMKLRHLDLGFNNLRTIASLGEISCPIVKLVLRNNALTTLRGIENLKEVEGIDLSYNIISNFFELEILSTLPSLKNLWLEGNPICC--ARWYRAHVYSFFHQPNELELD 318          
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Match: K0TFM0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFM0_THAOC)

HSP 1 Score: 55.5 bits (132), Expect = 1.930e-5
Identity = 36/139 (25.90%), Postives = 59/139 (42.45%), Query Frame = 0
Query:   11 LELDPSLRLLPGVRRLSLAHNRLSRVDF----LQDCASLEELDLSHNRLVSVENVHAVVGNLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALEEAGRLSTLPLVRRVWLEGNPLEEEEGKAYRVTVLSLLYKGR 145
            +   P++   P +  L+LA+N L +       L     L  +DLSHNRL S++NV   +GN+  L                               L     +S+LP +  +   GNPLEE++  ++R+ V +L  + R
Sbjct:  351 IRKPPTMSRFPNLISLNLANNELFKTKTAFAGLASLPMLSSIDLSHNRLRSLDNVFTYIGNVTELILTGNEIISTRGLDRLFSLEKLCLDDNRISLLSNLAGISSLPFLANLDATGNPLEEDDPSSFRIKVFNLFREVR 489          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12096.1757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LMA8_ECTSI3.530e-6270.05Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
A0A6H5K372_9PHAE2.510e-5568.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXQ6_9STRA4.070e-1434.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1D6JTJ8_MAIZE1.380e-829.60Outer arm dynein light chain 1 protein n=1 Tax=Zea... [more]
A0A1D6JTK2_MAIZE1.820e-829.60Outer arm dynein light chain 1 protein n=2 Tax=Zea... [more]
UPI00053FF5C92.560e-833.06uncharacterized protein LOC104901365 isoform X1 n=... [more]
C5WSP2_SORBI6.340e-828.80Uncharacterized protein n=14 Tax=Andropogoneae Tax... [more]
A0A8B9T151_ANAPL2.170e-753.51Nischarin n=2 Tax=Anatinae TaxID=2068716 RepID=A0A... [more]
A0A0K9P8F5_ZOSMR2.960e-628.19Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]
K0TFM0_THAOC1.930e-525.90Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 21..78
e-value: 3.5E-7
score: 29.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 22..43
score: 5.995
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 44..65
score: 8.205
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 89..110
score: 6.95
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 67..88
score: 5.871
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..154
e-value: 1.1E-27
score: 98.2
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 17..141
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 7..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12096contigL-elsbetiae_contig12096:316..4078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12096.1757.1mRNA_L-elsbetiae_contig12096.1757.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12096 316..4078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12096.1757.1 ID=prot_L-elsbetiae_contig12096.1757.1|Name=mRNA_L-elsbetiae_contig12096.1757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp
AFSSVCRCGLLELDPSLRLLPGVRRLSLAHNRLSRVDFLQDCASLEELDL
SHNRLVSVENVHAVVGNLRSLKLRGNLIALTAGLERMFSLEDVDLSDNRI
HALEEAGRLSTLPLVRRVWLEGNPLEEEEGKAYRVTVLSLLYKGRGADLD
RMARLVNKNTFGGASAGRGVGEEEDTADGGPVGVALDGRLPSRKEIGQLT
QLCFTKAAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf