prot_L-elsbetiae_contig12087.1753.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12087.1753.1
Unique Nameprot_L-elsbetiae_contig12087.1753.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length321
Homology
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BLAST of mRNA_L-elsbetiae_contig12087.1753.1 vs. uniprot
Match: D7FL23_ECTSI (Origin-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL23_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.130e-120
Identity = 190/228 (83.33%), Postives = 205/228 (89.91%), Query Frame = 0 
Query:   40 DAIVAQEIEDMDDIDATELDDDWEGVMDKKNARDMLLHQDKLALRKYRAQKYFVDALTGQDVAFFEKHKKAILYRILQRDATAAELFAKNKEEVERARRVDMEDMVSQDYNVRTELFKLVKDVGYGGFDDYTTEVCLKEAGESDKIKLGIGAVQLVIGGSTKKNTTLAGVLKPWLLKYMGLKLQARRDGRGDKRRSMYSMKPCPDIEEFSLRGNSVYDRVMGPNIGSK 267
            DAIVAQEIEDMD IDATELDD+WE VM+KK+ RDMLLHQDKLALRKY+AQK+F DALTGQDVAFFEKHKKAILYRIL+RDAT AELFAKNKEEVER RRVDMED+VSQDYNVRT L KLV+D GY GF D TTEVCLKEAGES +IKL IGAVQ ++GGSTKKNTTLAGVLKPWLLKYMGLKL  RRDGRG+KRR MY +KPCPDIEEFSLR N+VYDRVMG   G+K
Sbjct:  393 DAIVAQEIEDMDGIDATELDDEWEDVMNKKHTRDMLLHQDKLALRKYQAQKHFKDALTGQDVAFFEKHKKAILYRILERDATTAELFAKNKEEVERVRRVDMEDVVSQDYNVRTALLKLVRDAGYEGFGDDTTEVCLKEAGESAEIKLSIGAVQQLVGGSTKKNTTLAGVLKPWLLKYMGLKLHTRRDGRGEKRRMMYRVKPCPDIEEFSLRKNTVYDRVMGRKQGAK 620
[Close]
BLAST of mRNA_L-elsbetiae_contig12087.1753.1 vs. uniprot
Match: A0A6H5KBD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD5_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.780e-26
Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = 0 
Query:   88 AQKYFVDALTGQDVAFFEKHKKAILYRILQRDATAAELFAKNKEEVERARRVDMEDMVSQDYNVRTELFKLVKDVGYGGFDDYTTEVCLKEAGESDKIKLGIGAVQLVIGGSTK--KNTTLAGVLKP 212
            AQKYF D LTG+DVAFFEK+KKAI+YRIL+R+AT  EL+ K   EVERAR   MED++SQDY    +   L  + G             +EAGES+++K  I AVQ ++ G TK  +NTTLAGVLKP
Sbjct:   14 AQKYFADPLTGEDVAFFEKNKKAIVYRILERNATPGELYDKIVLEVERARVHGMEDIISQDYYNECQESSLEANQGCRIRRARGPHHRSEEAGESNEVKFAIAAVQELVAGPTKNSRNTTLAGVLKP 140
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12087.1753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FL23_ECTSI2.130e-12083.33Origin-binding protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KBD5_9PHAE4.780e-2653.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12087contigL-elsbetiae_contig12087:4655..5617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12087.1753.1mRNA_L-elsbetiae_contig12087.1753.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12087 4346..5666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12087.1753.1 ID=prot_L-elsbetiae_contig12087.1753.1|Name=mRNA_L-elsbetiae_contig12087.1753.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=321bp
MHITAPGILGGDCSLAFSLSNAEKRKATKARATVPEPEPDAIVAQEIEDM
DDIDATELDDDWEGVMDKKNARDMLLHQDKLALRKYRAQKYFVDALTGQD
VAFFEKHKKAILYRILQRDATAAELFAKNKEEVERARRVDMEDMVSQDYN
VRTELFKLVKDVGYGGFDDYTTEVCLKEAGESDKIKLGIGAVQLVIGGST
KKNTTLAGVLKPWLLKYMGLKLQARRDGRGDKRRSMYSMKPCPDIEEFSL
RGNSVYDRVMGPNIGSKGFDGESVRPDCGDGSVVDPTPDIRQFMFATERL
CFDDPTVTRGTGGKRGASCM*
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