prot_L-elsbetiae_contig12087.1752.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12087.1752.1
Unique Nameprot_L-elsbetiae_contig12087.1752.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length350
Homology
BLAST of mRNA_L-elsbetiae_contig12087.1752.1 vs. uniprot
Match: A0A835YQ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ85_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.110e-26
Identity = 71/181 (39.23%), Postives = 102/181 (56.35%), Query Frame = 0
Query:  169 HTIEGQLRRKKQEHRLNKLLKEWGYTVDCETTINAKAGQCLTDTQRHFSRLDFRVVECVNAICIVECDEDQHYWYNLSCEMSRMADVRAALALAGYTLPIYWIRYAPTGKYCVEGKQVKIPRKQREVALKEHLAKVCSPDFTPTKQVYVHYMYYSLVNSTQGPEILLDPDFPDAMKAVVSS 349
            H+ EG  R+ KQ+ R+ K+LKE GYTVD E TI      C+ D  RH +RLD  VV   + I IVE DE+ H  Y +SCE++RM  +  A+   GYT+P+ ++RY+P G    +G   ++ RK+REVAL E L +V +      + + + Y+ Y   N    P +  DP F + M   V S
Sbjct:  242 HSKEGAKRQLKQQMRVVKVLKEAGYTVDEECTIQYTG--CVPDPDRHHARLDVYVVTITSCILIVEVDEEAHASYLVSCEITRMLQMHEAILTRGYTVPVVFVRYSPNGAITRDGVYFEMTRKEREVALLEFLGRVRAGQQVFEEPLNLVYLCYPTANGL--PTVCEDPHFDEGMIGTVRS 418          
BLAST of mRNA_L-elsbetiae_contig12087.1752.1 vs. uniprot
Match: A0A835Z303_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z303_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.700e-25
Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 0
Query:  169 HTIEGQLRRKKQEHRLNKLLKEWGYTVDCETTINAKAGQCLTDTQRHFSRLDFRVVECVNAICIVECDEDQHYWYNLSCEMSRMADVRAALALAGYTLPIYWIRYAPTGKYCVEGKQVKIPRKQREVALKEHLAKVCSPDFTPTKQVYVHYMYYSLVNSTQG-PEILLDPDFPDAM 343
            HT EG  R+ KQ+ R+  LLKE GYTVD E TI  + G C+ D  RH +RLD  +V   + I IVE DE+ H  Y +SCE++RM  V  A+   GYT+P+ ++RY P G    +G  +K+ R++REV L E L +V        + + + Y+ Y    +T G P +  D DF + M
Sbjct:  342 HTKEGAKRQLKQQMRVANLLKEAGYTVDEECTI--QYGGCVPDPDRHRARLDIYIVTITSCILIVEVDEEAHASYLVSCELTRMLQVHEAILSRGYTVPVVFVRYNPNGCITKDGVCIKMTREEREVVLLEFLGRVRDGQQVFQEPLNLVYLCYP---TTYGLPTVCEDTDFDEGM 512          
BLAST of mRNA_L-elsbetiae_contig12087.1752.1 vs. uniprot
Match: A0A835Z3M2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.300e-16
Identity = 59/195 (30.26%), Postives = 100/195 (51.28%), Query Frame = 0
Query:  169 HTIEGQLRRKKQEHRLNKLLKEWGYTVDCETTINAKAGQCLTDTQRHFSRLDFRVVECVNAICIVECDEDQHYWYNLSCEMSRMADVRAALALAGYTL----------------PIYWIRYAPTGKYCVEGKQVKIPRKQREVALKEHLAKVCSPDFTPTKQVYVHYMYYSLVNSTQGPEILLDPDFPDAMKAVV 347
            HT+EGQ ++ +++ R+ ++L E  YTVD E  +  + G C+ D  +  +R+D+ V+   NAI IVECDE  H  Y L+CE+SRM  +  A+  A +++                P+ ++R+ P   + V+G++    R  RE  L E L  +          + + Y+ YS+++    P +  DPDF   M+  V
Sbjct:  226 HTVEGQQKKIRKQDRVRQVL-ESAYTVDSECHVRYQGG-CVPDPDKFCARIDYHVLGITNAIVIVECDEQGHKDYTLTCELSRMEQIHEAIIKANFSMVVAKAGEAYALTASMKPVVFVRFNPD-PWKVDGEKELSRRCDREAVLLEVLQDISDGTLELPHPLNLVYIGYSMLDGE--PVVCGDPDFAPQMRGCV 415          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12087.1752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YQ85_9STRA1.110e-2639.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z303_9STRA2.700e-2540.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3M2_9STRA4.300e-1630.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 44..69
e-value: 0.046
score: 22.8
coord: 145..169
e-value: 0.11
score: 21.6
coord: 117..139
e-value: 0.12
score: 21.4
coord: 14..38
e-value: 0.37
score: 19.8
coord: 87..111
e-value: 0.093
score: 21.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 117..139
e-value: 0.0037
score: 17.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 147..169
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 46..69
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 44..74
score: 10.616
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 87..116
score: 8.704
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 117..144
score: 11.51
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 145..174
score: 10.471
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 14..43
score: 9.577
NoneNo IPR availableGENE3D3.30.160.60coord: 146..170
e-value: 2.1E-9
score: 39.4
NoneNo IPR availableGENE3D3.30.160.60coord: 4..42
e-value: 4.4E-5
score: 25.1
NoneNo IPR availableGENE3D3.30.160.60coord: 86..145
e-value: 4.2E-10
score: 41.6
NoneNo IPR availableGENE3D3.30.160.60coord: 43..69
e-value: 3.8E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR24406FAMILY NOT NAMEDcoord: 50..319
coord: 1..182
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 130..170
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2..42
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 87..145
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 29..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12087contigL-elsbetiae_contig12087:859..1908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12087.1752.1mRNA_L-elsbetiae_contig12087.1752.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12087 859..1908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12087.1752.1 ID=prot_L-elsbetiae_contig12087.1752.1|Name=mRNA_L-elsbetiae_contig12087.1752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
MQLHELRHQGIRPYSCYLDGCPYKAYTAGALKVHEMTHSGEKTHVCDIGQ
CRDAFTQPSTLRRHKKTLHPGGVRVFETPTKIIRPLLACDVDGCPYTTRR
PDQMDLHEKRHRGEKTFSCGTCPYRAFTKYELTVHQRTHSHEKPFVCDFE
GCGHAYSQSGNVIIHKKTHTIEGQLRRKKQEHRLNKLLKEWGYTVDCETT
INAKAGQCLTDTQRHFSRLDFRVVECVNAICIVECDEDQHYWYNLSCEMS
RMADVRAALALAGYTLPIYWIRYAPTGKYCVEGKQVKIPRKQREVALKEH
LAKVCSPDFTPTKQVYVHYMYYSLVNSTQGPEILLDPDFPDAMKAVVSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf