prot_L-elsbetiae_contig12085.1751.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12085.1751.1
Unique Nameprot_L-elsbetiae_contig12085.1751.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length394
Homology
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BLAST of mRNA_L-elsbetiae_contig12085.1751.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 7.420e-93
Identity = 173/295 (58.64%), Postives = 202/295 (68.47%), Query Frame = 0 
Query:  112 LGGGFVHGPG------HSAPXXXXXXGHAIAPWLGALAVGAVAATAMTPYAGRDRGRPGVVVWREGGQEMSAEVNMLTVRVCRAQKLKKVQIIGKQDPYVRAKLLYNGHKIGECRSSTHTDGGKNPTWENTGRSVFTFYVPSTVTLDSLSLVLDVVNDNLVSDAFIGTTGSIALDRAATGDAKWWNVTTGGTLQAAIELVTADSHRATAAAAPPQPRQPGYSPTRSAAXXXXXXPTYTGGXXXSDYGGNGSAGANPSPHVPVAHATP-----SGNLFGGAAVAAPTDA-PPPPYE 394
            LGG   H PG         P      G   APWLGALAVGAVAA+ ++PY   D GR G+VVWREG QEMSA VNM+TVRVC+AQ LKKVQ+IGKQDPYVRAKLL+NGHKIGECRSSTHTDGG+NPTW+N  +SVFTFYVP+TVTLD+L++VLDVVNDNLV+D+ IGTTGSI L  AATG++KWWN+++GGT+QA IEL+T +S         P      YS   +AA       +   G     YGG   A  NP PHV VAHATP      GN +GGAA  A   + PPP YE
Sbjct:  112 LGGPGQHHPGGFSXXXXXGPGGLVGMGPVFAPWLGALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPESGGGGGTGTHPNTA---YSRNSAAAADPAVASSRPSG---GSYGGGRVATVNPPPHVAVAHATPVAAGAPGNAYGGAAPGAMAMSNPPPSYE 400
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BLAST of mRNA_L-elsbetiae_contig12085.1751.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.110e-91
Identity = 168/265 (63.40%), Postives = 195/265 (73.58%), Query Frame = 0 
Query:  136 APWLGALAVGAVAATAMTPYAGRDRGRPGVVVWREGGQEMSAEVNMLTVRVCRAQKLKKVQIIGKQDPYVRAKLLYNGHKIGECRSSTHTDGGKNPTWENTGRSVFTFYVPSTVTLDSLSLVLDVVNDNLVSDAFIGTTGSIALDRAATGDAKWWNVTTGGTLQAAIELVTADSHRATAAAAPPQPRQPGYSPTRSAAXXXXXXPTYTGGXXXSDYGGNGSAGANPSPHVPVAHATP-----SGNLFGGAA-VAAPTDAPPPPYE 394
            APWLGALAVGAVAA+ ++PY   D GR G+VVWREG QEMSA VNM+TVRVC+AQ LKKVQ+IGKQDPYVRAKLL+NGHKIGECRSSTHTDGG+NPTW+N  RSVFTFYVP+TVTL++L++VLDVVNDNLV+D+ IGTTGSI L  AATG++KWWNV++GGTLQA IEL+T +S              P  + +RS  XXXX     +       Y G   A  NPSPHV VAHATP      GN +GGA  VA     PPP YE
Sbjct:  124 APWLGALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPES-----GGXXXXXTHPNIAYSRSXXXXXXPA-VASSRPSGGSYNGGRVATVNPSPHVAVAHATPVAAGAPGNAYGGATPVATAMSDPPPSYE 382
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12085.1751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZ55_9PHAE7.420e-9358.64C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMN7_ECTSI2.110e-9163.40C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 181..291
e-value: 2.4E-4
score: 30.4
IPR000008C2 domainPFAMPF00168C2coord: 182..274
e-value: 3.3E-8
score: 33.7
IPR000008C2 domainPROSITEPS50004C2coord: 180..275
score: 10.915
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 173..305
e-value: 3.5E-14
score: 54.8
NoneNo IPR availablePANTHERPTHR47052FAMILY NOT NAMEDcoord: 175..391
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 176..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12085contigL-elsbetiae_contig12085:1283..5312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12085.1751.1mRNA_L-elsbetiae_contig12085.1751.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12085 1283..5312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12085.1751.1 ID=prot_L-elsbetiae_contig12085.1751.1|Name=mRNA_L-elsbetiae_contig12085.1751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=394bp
MGDDGGGGGGGGGDGGGFGDGGGGGGGGGGHHHGGGGFGGGHHGGGFGDG
GHHHGFGGGHHHGFGGGHGFGGPVGYRGGAFGFGFGGPGPGFPPHHYHHH
PGGPGGFPGGPLGGGFVHGPGHSAPGGYVGGGHAIAPWLGALAVGAVAAT
AMTPYAGRDRGRPGVVVWREGGQEMSAEVNMLTVRVCRAQKLKKVQIIGK
QDPYVRAKLLYNGHKIGECRSSTHTDGGKNPTWENTGRSVFTFYVPSTVT
LDSLSLVLDVVNDNLVSDAFIGTTGSIALDRAATGDAKWWNVTTGGTLQA
AIELVTADSHRATAAAAPPQPRQPGYSPTRSAAAAPAQPPTYTGGGGGSD
YGGNGSAGANPSPHVPVAHATPSGNLFGGAAVAAPTDAPPPPYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf