prot_L-elsbetiae_contig1208.1750.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1208.1750.1
Unique Nameprot_L-elsbetiae_contig1208.1750.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length580
Homology
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 9.710e-119
Identity = 319/657 (48.55%), Postives = 357/657 (54.34%), Query Frame = 0
Query:    3 QDKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKRSVIAEWADHASSLGAREAGLPHEFPGGGVGGRGGSGPL-HHSLPVAPGEAAAARAAGVGYLGGGGPPPSLHSPPAQ-------RYGGEASWRDDPLASAHSRHHQGRGPAELGRQPPSLPPHSSALSFPMGWYG-GAAGHEGAEAGPGAADYRQLGHR--VEPPMGYAPTTAEALSRRQEHHAHVPRGAWSVSSLEVE----------GAGERAAAEMEPQRRRTWEPPQGGWASHSEPLVRSPQEGVGS-AHGQRVRLSPPDLPG----------------RPLMRPSADPYAPAALSPREREAAGHPAKHPRGDDPDSSLPYLSA-REPADPMAGFSFHPAANRGSSWRRAPHMAPWES--PGXXXXXXXXXXXXXXXXNDPRIQQHYAQQHLAHFDSADRPRSTXXXXXXXXXXXXXXXX---------RYREDFMREERGQERGRGGGVVEWHLPHG-------------ERPELPPPP-HGFDRRHGPAERPLAGGREARHEDGRGGGEAVVGGVAPAPPGSAPLDDRERQQMFVRGGAGGPDSPYERSAVRLGWPS---DQMDA------------QQQQRSEHGRHGWDGG 580
            +D ++ELRKSCDYCVRLKRACDGKNPCSLC+RR+K CTRSARKKSGPAKGTKYAPRRKRSVIAEWAD  S  GAR   LPHEFPGGG   RGG G L HH  P+AP +AA  RAAG  Y  G                    R+G EA W +        R   GR P E G    SL P SS L FP  WY  G + HE  E G G       G R    PPMGYAPTTAE LSRRQ+ H +  R ++S+SSLE            G      A  EP RRRT E P G WAS S+P +RSPQ+G  + A G+RVRLSPP L                  R +MRP AD Y   A SPR RE AG P + PR  DP+SSL  L   REP DP AGFSFHPAANR  SWRR    + WES  PG                NDPR    Y  Q L  F+S+DRP   XXXXXXXXXXXXXXXX         RYR +F RE     +GRG  VVEW LPHG             ER ELPPPP HGFDR H P ERPL GG   R  +GR   + ++G  AP+PP       R+ Q    RG  GG    YE  + R  W     DQ+              Q+QQR E GR  W+GG
Sbjct:   12 RDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTS--GARGPLLPHEFPGGGT--RGGGGQLPHHDFPLAPIDAAGMRAAGRAYYSGXXXXXXXXXXXXXXXXXXXGRFGAEALWEEGGPLPGQGR---GRRPGEEGHPSSSLSP-SSGLPFP--WYAPGPSPHEETE-GRGGERGGVGGGRGFAPPPMGYAPTTAEELSRRQQEHGYHHRASYSMSSLEXXXXXXXXXXXXGRRPGVPAAPEPYRRRTLELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADYYPSPATSPRAREMAGRPHERPRELDPESSLLSLPPPREPPDPTAGFSFHPAANR-PSWRRG---STWESGSPGGGGDGRPVDR------NDPRAYHQYPPQQLGSFESSDRPXXXXXXXXXXXXXXXXXXXXRGASLGDRRYR-NFDREAGEDGQGRGRSVVEWPLPHGXXXXXXXXXDPYHERVELPPPPPHGFDR-HLPLERPLMGG--GRQGEGR--HDMLLG--APSPP-------RDEQGYAARGADGG---AYEHPSGRARWAGGGGDQVGLPGRGSRDHRDYEQEQQRVERGRQDWEGG 629          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 1.110e-111
Identity = 300/653 (45.94%), Postives = 336/653 (51.45%), Query Frame = 0
Query:    3 QDKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKRSVIAEWADHASSLGAREAGLPHEFPGGGVGGRGGSGPLHHSLPVAPGEAAAARAAGVGYLGGGGPPPSLHSPPAQ-------RYGGEASWRDDPLASAHSRHHQGRGPAELGRQPPSLPPHSSALSFPMGWYGGAAGHEGAEAGPGAA----DYRQLGHRVEPPMGYAPTTAEALSRRQEHHAHVPRGAWSVSSLEVEG-----AGER--AAAEMEPQRRRTWEPPQGGWASHSEPLVRSPQEGVGS-AHGQRVRLSPPDLPG----------RPLMRPSADPYAPAALSPREREAAGHPAKHPRGDDPDSSLPYLSA-REPADPMAGFSFHPAANRGSSWRRAPHMAPWES--PGXXXXXXXXXXXXXXXXNDPRIQQHYAQQHLAHFDSADRPRSTXXXXXXXXXXXXXXXX-------------RYREDFMREERGQERGRGGGVVEWHLPHG-------------ERPELPPPPHGFDRRHGPAERPLAGGREARHEDGRGGGEAVVGGVAPAPPGSAPLDDRERQQMFVRGGAGG--PDSPYERSAVRLGWPS---DQMDA------------QQQQRSEHGRHGWDGG 580
            QD +VELRKSCDYCVRLKRACDGKNPCSLC+RR+K CTRSARKKSGPAKGTKYAPRRKRSVIAEWAD     G     LPHEF GGG  G GG  P HH   +AP +AA  RAA   Y  GGG   S H            R+G EA W +        R   GR P E G  P SL P S  L FP  WY       G   G G                   GYAPTTAE LS       +  R ++S+S LE E      AG R  A A  EP RRRT E P G WAS S+P +RSPQ+G  + A G+RVRLSPP              RP+MRP AD Y   A SPR  E AG P + PR  DP+SS+  L   REP DP AGFSFHPAANR  SWRR    + WES  PG                NDPR    Y    L  F+S+DR  S+       XXXXXXXXX             RYR +F RE     +GRG GVVEW LPHG             E+ ELPPPPHGFDR H P ERPL GG       G G  + ++G  AP+PP       R++Q    RGG GG      YE  + R  W     DQM              Q+QQ+ E GR  WDGG
Sbjct:    4 QDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGAGGPP--LPHEFQGGGTSGGGGQLP-HHDFSLAPFDAAGMRAAERTYNSGGGL--SAHXXXXXXXXXXGGRFGAEALWEEGAPRPGQGR---GRWPGEEGH-PSSLLPSSPGLPFP--WYASRPSPHGEAEGRGGERGXXXXXXXXXXXXXXXGYAPTTAEELSXXXXXXGYHHRASYSMSFLEAEXXXXXXAGRRPGAPAMREPYRRRTPELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRPGADYYPSPATSPRASEMAGRPHERPRELDPESSVLSLPPPREPPDPTAGFSFHPAANR-PSWRRG---STWESGSPGGGGGDGRPVDR-----NDPRAYHQYPPPQLGSFESSDRAPSSSSWSSPGXXXXXXXXXXXXGRGASLGGDRRYR-NFDREAGEDGQGRGRGVVEWPLPHGXXXXXXXXXDPYHEQVELPPPPHGFDR-HLPLERPLMGGGR----QGEGKHDMLLG--APSPP-------RDKQGYAARGGVGGGADGGAYEYPSGRPRWAGGGGDQMGLPGRGSRDHRDFEQEQQQVERGRQDWDGG 621          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.530e-14
Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    4 DKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKR 61
            D  V LRKSCD CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   57 DGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.660e-13
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    7 VELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKRSVIAEWADHASS 73
            V LRKSCD CVRLKRACDG++PC LC RR + CTRS ++KSGPAKGTKY  RR R + A  A+ ASS
Sbjct:   32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR-MEAGIAEPASS 97          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.820e-13
Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    9 LRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKRSV 63
            LRKSCDYCVR+KR C G  PC+LC+RRNK C RS +K+SGPAKGTKY  R+ R +
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKI 77          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.020e-7
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   19 LKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTKYAPRRKR 61
            +KRACDG +PC+LCSRR K C R  R+KSGPAKG KYAPRR++
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 3.030e-5
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    3 QDKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTK 54
            +D  V LR +CD C R+KR CDG  PC+ C RR++ C  S ++KSGP KG+K
Sbjct:  201 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 252          
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 3.320e-5
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    3 QDKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPAKGTK 54
            +D  V LR +CD C R+KR CDG  PC+ C RR++ C  S ++KSGP KG+K
Sbjct:  177 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1208.1750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPF9_ECTSI9.710e-11948.55Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE1.110e-11145.94Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LPZ9_ECTSI1.530e-1474.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE1.660e-1367.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKM5_ECTSI3.820e-1367.27Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5JII0_9PHAE2.020e-769.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LM00_ECTSI3.030e-551.92Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE3.320e-551.92Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 7..50
e-value: 0.0075
score: 23.9
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 11..45
e-value: 5.1E-6
score: 26.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 12..41
score: 8.995
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 5..66
e-value: 1.3E-5
score: 27.1
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 5..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1208contigL-elsbetiae_contig1208:23729..26054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1208.1750.1mRNA_L-elsbetiae_contig1208.1750.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1208 23729..26054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1208.1750.1 ID=prot_L-elsbetiae_contig1208.1750.1|Name=mRNA_L-elsbetiae_contig1208.1750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=580bp
PSQDKSVELRKSCDYCVRLKRACDGKNPCSLCSRRNKECTRSARKKSGPA
KGTKYAPRRKRSVIAEWADHASSLGAREAGLPHEFPGGGVGGRGGSGPLH
HSLPVAPGEAAAARAAGVGYLGGGGPPPSLHSPPAQRYGGEASWRDDPLA
SAHSRHHQGRGPAELGRQPPSLPPHSSALSFPMGWYGGAAGHEGAEAGPG
AADYRQLGHRVEPPMGYAPTTAEALSRRQEHHAHVPRGAWSVSSLEVEGA
GERAAAEMEPQRRRTWEPPQGGWASHSEPLVRSPQEGVGSAHGQRVRLSP
PDLPGRPLMRPSADPYAPAALSPREREAAGHPAKHPRGDDPDSSLPYLSA
REPADPMAGFSFHPAANRGSSWRRAPHMAPWESPGGGGGGGGGGGGRAAG
GNDPRIQQHYAQQHLAHFDSADRPRSTWNSPGGGGGGEYPEGGRYREDFM
REERGQERGRGGGVVEWHLPHGERPELPPPPHGFDRRHGPAERPLAGGRE
ARHEDGRGGGEAVVGGVAPAPPGSAPLDDRERQQMFVRGGAGGPDSPYER
SAVRLGWPSDQMDAQQQQRSEHGRHGWDGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf