prot_L-elsbetiae_contig12070.1740.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12070.1740.1
Unique Nameprot_L-elsbetiae_contig12070.1740.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length241
Homology
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BLAST of mRNA_L-elsbetiae_contig12070.1740.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 5.430e-119
Identity = 176/227 (77.53%), Postives = 204/227 (89.87%), Query Frame = 0 
Query:    9 AAAAYAALTDEDWCTTQVHECAMLLGVVPVSSIVPAVGHFHTMLEAARVAKTNKKNADIGDLGQRLRLAWKQACLIDRRAGVFVGSKDRSAMTLHPRVYLSPDDFSAMVLPFWLFMARNLYVETGDVVEDLHKHYSTGLFDANVVAQLEVHLHLLSLYTTEALGATDVVRWARDCPWWERKPPAEGVVPPGAPGMCRVVMIASEEAVAIIRQLRDPSLCVLMHDESQ 235
            AAAAYAALTDEDWCTT+V ECA+LLGVVPVS + PAVGHFHTMLEAAR AKTNKKNADIGDLGQRLRLAWKQ CL+D+RAG FV SKDR A TLHPRV LSP +F+ M+LPFWLFM R+LYVE  ++VE LH++YSTGLFD+NVV QL+VH+HLLSL+ TEA+GATDVVRWA DCPWW++KP AEGVVP G+PGMCRVVM+A EEAV+I+R LR+P+LC+LM+DESQ
Sbjct:  592 AAAAYAALTDEDWCTTKVQECALLLGVVPVSGVAPAVGHFHTMLEAARAAKTNKKNADIGDLGQRLRLAWKQLCLMDQRAGAFVASKDRVATTLHPRVDLSPAEFADMMLPFWLFMTRSLYVEAANLVEHLHRNYSTGLFDSNVVDQLDVHMHLLSLFRTEAMGATDVVRWALDCPWWDKKPSAEGVVPKGSPGMCRVVMLAPEEAVSIVRHLRNPALCILMNDESQ 818
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12070.1740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE5.430e-11977.53DUF4470 domain-containing protein (Fragment) n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12070contigL-elsbetiae_contig12070:262..5026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12070.1740.1mRNA_L-elsbetiae_contig12070.1740.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12070 262..5026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12070.1740.1 ID=prot_L-elsbetiae_contig12070.1740.1|Name=mRNA_L-elsbetiae_contig12070.1740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
MKKKEAKLAAAAYAALTDEDWCTTQVHECAMLLGVVPVSSIVPAVGHFHT
MLEAARVAKTNKKNADIGDLGQRLRLAWKQACLIDRRAGVFVGSKDRSAM
TLHPRVYLSPDDFSAMVLPFWLFMARNLYVETGDVVEDLHKHYSTGLFDA
NVVAQLEVHLHLLSLYTTEALGATDVVRWARDCPWWERKPPAEGVVPPGA
PGMCRVVMIASEEAVAIIRQLRDPSLCVLMHDESQVCVCV*
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