prot_L-elsbetiae_contig12067.1736.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12067.1736.1
Unique Nameprot_L-elsbetiae_contig12067.1736.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: A0A7S0HHN8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHN8_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 3.490e-8
Identity = 45/130 (34.62%), Postives = 65/130 (50.00%), Query Frame = 0
Query:   15 RRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMAVDRNERAVA-EAFVKAKANPSMKPRPSLMVPIGMWEVAG------LAVPTALGLAAARGELDMVRMIVGRRGATFRAEDGSTAMHTAA 137
            R LT+LH+A I G  +++  LV AGA + ARDS G TP+++A +++E A+A  A V A A+   K   +   P+ +   A       LAV T L L A+   +D                DG T +H AA
Sbjct:    1 RGLTALHLAVIAGNVKMIEGLVAAGASLSARDSMGMTPLHVAAEQSEHALAIRALVAAGASLEEKTTRNGRTPLNLAAAALPSNKQLLAVETLLALGASHKAIDT---------------DGDTPLHAAA 115          
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: A0A7S0RUE4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RUE4_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 1.840e-6
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 0
Query:   18 TSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMA--VDRNERAVAEAFVKAKANPSMKPRPSLMVPIGMWEVAGLAVPTA 100
            T LH+AA G  P  VA L++AGAR+DA+D  G TP+ +   ++ NE  VA AF     +    P PSLM   G  E    A P A
Sbjct:    2 TPLHLAAKGNHPAAVAKLIEAGARVDAKDKNGQTPLQLVPHLNTNEAMVA-AFAGNHTDVPASPGPSLMPAAG--EAPEAASPAA 83          
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: A0A7R8WQV0_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WQV0_9CRUS)

HSP 1 Score: 56.6 bits (135), Expect = 3.770e-6
Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 0
Query:    1 MLLIHGADPNMANGRRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMAVDRNERAVAEAFVKAKANPSMKPRPSLMVPIGMWEVAGLAVPTALGLAAARGELDMVRMIVGRRGATFRAED--GSTAMHTAAQGSRRVDTPGDRSSIIAVLAAAKVDPEAALKDSKRTALH 176
            +LL +GADPN+A+    + LH A       L   L+Q GA ++A+D +G TP+++A++ N  +V E  +   A+P++        P+   E A  A                  +++ ++GA   A+D  G T +  A        T  +R S++ VL A   DP  A +D +R+ LH
Sbjct:  312 VLLANGADPNIASEVERSPLHQAESAETAEL---LIQKGAEVNAKDRRGKTPLFVAIENNRHSVVEVLLANGADPNIASEDERS-PLHQAESAETA-----------------ELLI-QKGAEVNAQDERGKTPLFVA--------TDWNRHSVVEVLLANGADPNIASED-ERSPLH 458          
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: UPI0013644FEE (ankyrin repeat domain-containing protein 18A-like isoform X2 n=1 Tax=Corvus moneduloides TaxID=1196302 RepID=UPI0013644FEE)

HSP 1 Score: 54.3 bits (129), Expect = 1.960e-5
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    5 HGADPNMANGRRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMAVDRNERAVAEAFVKAKAN 74
            HGADPN+ +    T+LH A + G   +   L++ GAR DA++  G TP+ +AV +    + E  VK  A+
Sbjct:   18 HGADPNLTDADGNTALHPAVLSGNATVAGRLLEHGARSDAQNQGGYTPLDLAVSKEHEEMLECLVKKAAD 87          
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: UPI0013645711 (ankyrin repeat domain-containing protein 20A1-like isoform X1 n=1 Tax=Corvus moneduloides TaxID=1196302 RepID=UPI0013645711)

HSP 1 Score: 54.3 bits (129), Expect = 1.980e-5
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    5 HGADPNMANGRRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMAVDRNERAVAEAFVKAKAN 74
            HGADPN+ +    T+LH A + G   +   L++ GAR DA++  G TP+ +AV +    + E  VK  A+
Sbjct:   18 HGADPNLTDADGNTALHPAVLSGNATVAGRLLEHGARSDAQNQGGYTPLDLAVSKEHEEMLECLVKKAAD 87          
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Match: A0A1I8G2Q1_9PLAT (ANK_REP_REGION domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8G2Q1_9PLAT)

HSP 1 Score: 52.8 bits (125), Expect = 9.060e-5
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    8 DPNMANGRRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGSTPMYMAVDRN 60
            DP+  N +  T+ H+AAI GR  ++  L Q GAR+DA DS G+TP+ +AV RN
Sbjct: 1291 DPSKPNQQGSTAAHLAAIAGRSDILDALSQHGARLDAVDSSGATPLMIAVHRN 1343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12067.1736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A7S0HHN8_9EUKA3.490e-834.62Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S0RUE4_9CHLO1.840e-642.35Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7R8WQV0_9CRUS3.770e-628.65Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
UPI0013644FEE1.960e-537.14ankyrin repeat domain-containing protein 18A-like ... [more]
UPI00136457111.980e-537.14ankyrin repeat domain-containing protein 20A1-like... [more]
A0A1I8G2Q1_9PLAT9.060e-549.06ANK_REP_REGION domain-containing protein n=1 Tax=M... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 48..77
e-value: 1.5
score: 17.8
coord: 128..165
e-value: 200.0
score: 10.2
coord: 96..126
e-value: 1400.0
score: 3.9
coord: 15..44
e-value: 3.7
score: 16.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 15..47
score: 10.873
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 94..181
e-value: 1.2E-8
score: 36.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..83
e-value: 1.1E-17
score: 66.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..179
NoneNo IPR availablePFAMPF13857Ank_5coord: 5..56
e-value: 3.9E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 1..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..80
score: 22.092

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12067contigL-elsbetiae_contig12067:2241..2786 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12067.1736.1mRNA_L-elsbetiae_contig12067.1736.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12067 2209..2933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12067.1736.1 ID=prot_L-elsbetiae_contig12067.1736.1|Name=mRNA_L-elsbetiae_contig12067.1736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MLLIHGADPNMANGRRLTSLHMAAIGGRPRLVAPLVQAGARIDARDSKGS
TPMYMAVDRNERAVAEAFVKAKANPSMKPRPSLMVPIGMWEVAGLAVPTA
LGLAAARGELDMVRMIVGRRGATFRAEDGSTAMHTAAQGSRRVDTPGDRS
SIIAVLAAAKVDPEAALKDSKRTALHIVCSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom