prot_L-elsbetiae_contig12054.1730.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12054.1730.1
Unique Nameprot_L-elsbetiae_contig12054.1730.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length803
Homology
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 6.530e-118
Identity = 277/668 (41.47%), Postives = 355/668 (53.14%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTDE++MDGY D    DF P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDR W+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                    G   PP+  S  P             +A PAP  XXXXXXXXXXX            PA  +PPL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  564 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIDCFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRPWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVTVLKASTGRVVYTNNVSWVTSAPAG----------------------------------EGVPRPPSATSPSP-------------SATPAPGNXXXXXXXXXXXXXXXYQXPPPXDPA--MPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 1167          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 1.750e-113
Identity = 280/687 (40.76%), Postives = 358/687 (52.11%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL---------------SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPAR-----------GLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTDE++MDGY D    DF P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                                  S +  P         XXXX XXX XX    P+P  XXXXXXXXXXX                    +PPL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  710 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXSASSTPAXXXXXXXXXXXXXXXXQXXSATSPSPSAXXXXXXXXXXXXXXXXXXXXXDQXXXXXXXAMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 1381          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5KS85_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS85_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 1.130e-109
Identity = 273/690 (39.57%), Postives = 356/690 (51.59%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAF---AAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL---------------SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARG-----------LPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTD+++MDGY D  +  F P  + +  A  +A +   ++  G    +D +   AA+ P   P  +GS  K  DI+ +H    HA   LLR+  + + + LTG LE C  C+  K RR SVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                                  + +  P         XXXX XXXXXX    P+  XXXXXXXXXXXX                    +PPL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  159 TFPGVDLGDTSV--LTDDQLMDGYDDTPYQYFFPAFIPENDAANVAGVLD-NIDGG----ADFYLGAAALGPGASPFALGSTEKSVDIDRFHRSLAHACNPLLRETTQHRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFDV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTPXXXXXXXXXXXXXXXXXXXXSATSPSXSXXXXXXXXXXXXXXXXXXXXXXDQXXXXXXXXMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 830          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 1.710e-109
Identity = 274/719 (38.11%), Postives = 352/719 (48.96%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPP----------------------------------------------------------LSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTDE++MDGY D  + DF P  + ++ A   A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  P +D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                   +G    P      PP    S             XXXXXXXXXXXXX AA++P                                                                L+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  204 TFPGMDLGDTSV--LTDEQLMDGYDDTPYEDFFPVFIPESDAANAAGVLD-SIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFDV-DFASIPSLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGS------------------------------AGITAAPTPPPFTPPVV--SINFGPAXXXXXXXXXXXXXXXXXXXXXAASSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 875          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 5.080e-108
Identity = 297/687 (43.23%), Postives = 373/687 (54.29%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAA-----------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLP---------PLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTDE++MDGY D    DF P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                 +           XXXXXXXXXXXXXXXXX      S T            XXXX XXXXXX       XXXXXXXXXXXXX                    PL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  564 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 1235          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JL48_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL48_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 1.000e-105
Identity = 266/666 (39.94%), Postives = 338/666 (50.75%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLS---------------GTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-----------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHL 780
            T  G++L  T V  LTDE++MDGY D    DF P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                                       P         XXXX XXXXX     P+P   XXXXXXXXXX                P   +PPL+   +R+L  G QA  M   RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP   P+LP C   DLRVPK+Y +A   +  HRHL
Sbjct:  564 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXXAASTPXXXXXXXXXXXXXXXXXXXPSATSPSPSATXXXXXXXXXXXXXXXXXXDPDQPPPPPDPAMPPLTAHAMRQLRPGTQAECMTGPRLPSRTRSG--------TRHSTGLISMLDRNTLVSILEARSAVDKERRELGGSEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQLPDLPHCQASDLRVPKSYKEAMASE--HRHL 1214          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JZF4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF4_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 7.480e-100
Identity = 240/644 (37.27%), Postives = 311/644 (48.29%), Query Frame = 0
Query:  159 LTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPPLSQRVIRELGWGQAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            LTDE++MDG+ D  + D  P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN++H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+++Y    + C  +D GTEWT   FR FC    I +EFT     Q N  VESAIWRIVK   T RRS   +F + DF+  PG+D RGD LW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                   +G    P      PP    +    XX       XXXXXXXXXXXXX A+                      +   P     S + +             LG                             G                           P+A    LA REDI A LRDQ PP  RP+LP C   DL VPK+Y +A   +  HR+L+ D++ REFHG L AGTF  A
Sbjct:   10 LTDEQLMDGHDDTPYQDLFPVFIPESDAANVAGVLD-SIDGGADFDLGA-AALGPGASPFALGSTEKSVDINHFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVKRYDLGRIECFHVDNGTEWTRGDFRRFCDDNCIGVEFTTPGVLQYNGVVESAIWRIVKAGMTARRSAGRVFNV-DFASIPGLDERGDLLWMESAKWATDALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGS------------------------------AGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXXAASPPXXXXXXXXXXXXXXXXXXXXSATSP-----SPSATXXXXXXXXXXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------FPLAFATLLANREDIGATLRDQRPPEQRPDLPHCQASDLLVPKSYKEAMASE--HRNLWSDSIQREFHGFLEAGTFTPA 587          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5L6V8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V8_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 8.900e-100
Identity = 244/612 (39.87%), Postives = 314/612 (51.31%), Query Frame = 0
Query:  220 VGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL---------------SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-----------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVAT--GGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            +GS  K  DI+ +H    HA E LLR+  +++ + LTG L  C  C+  K RR SVPR  G RAS+P    HVDLCG  VP+L G++YL   + SA R+  VYGLR+KSD   A +  + D+ +Y    + C+R+D GTEWT   FR FC   GI +E T    PQ N  VESAIWRI+K     RRS   +  + DF+   G+D RGDRLW+  +K+  + +N+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                                  + +  P         XXXX XXXXXX    P+P   XXXXXXXXXX                P   +PPL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G               A     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M R F+GLL AGTF  A
Sbjct:  355 LGSTEKSVDIDRFHRSLAHACEPLLRETDQQRGIMLTGKLVPCTDCMRAKGRRGSVPRGPGARASKPFGRVHVDLCGPLVPSLGGNLYLFVAVASALRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECVRVDNGTEWTRGDFRRFCDDNGIGIESTPPGVPQYNGVVESAIWRIMKAGMAVRRSAGRVLNV-DFTSISGLDERGDRLWMELAKWAADAVNQLATKANPGRRSPHEIFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTPXXXXXXXXXXXXXXXXXXXXSATSPSPSATXXXXXXXXXXXXXXXXXXXXDQXPPPPDPAMPPLTAHALRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXLAAVDPAAAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQRGFYGLLEAGTFTPA 955          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5L749_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L749_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 2.320e-98
Identity = 237/563 (42.10%), Postives = 297/563 (52.75%), Query Frame = 0
Query:  269 KARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPL-------------------APLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +F + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G NH   TV VLKAS+GRV +T ++ WV  + A                                                   +P + T            XXXX XXXXX  +A  AP XXXXXXXXXXXX            PA  +PPL+   +R+L  G +A  M + RL SRTRSG         RH  GL+S   +  L+S L   + ++  R +  G   G                     A    P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:    4 KGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDIGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPCRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXASPPAATXXXXXXXXXXXXXXXXXXXXXXSPSATXAPGXXXXXXXXXXXXXXXXYQXPPPXDPA--MPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLVSMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 553          
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JQ01_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ01_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.860e-97
Identity = 240/667 (35.98%), Postives = 310/667 (46.48%), Query Frame = 0
Query:  145 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTV--AVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL-----SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPPLSQRVIRELGWGQAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVAT--GGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVA 801
            T  G++L  T V  LTDE++MD Y D  + DF P  + ++ A  +A +   S+  G      A AA+ P   P  +GS  K  DIN +H    HA E LLR+ A+++ + LTG LE C  C+  K RRASVPR  G RAS+P    H+DLCG  VP+L G++YL   +DSASR+  VYGLR+KSD   A +  + D+ +Y    + C R+D GTEWT   FR FC   GI +EFT    PQ N  VESAIWRI+K     RRS   +  + DF+  PG+D RGDRLW+ S+K+  + LN+ +TKANPG  SP + FTG +    VLPFFQPG MR+ RR+KLDDQ   C +L  G       +  +  KA+ GR           RS                                  A L      G   P  T  +L                                    +APA                                  G+ GS        GL+S   K  L+S L     ++  R +  G   G               A   G      P+A    LA REDIDA LRDQ PP  RP+LP C   DLRVPK+Y +A   +  HRHL+ D+M REF+GLL AGTF  A
Sbjct:  464 TFPGMDLGDTSV--LTDEQLMDVYDDTPYQDFFPVVIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKKLLADVGRYYLGRVECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKVGMAARRSTARVLNV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGXKWAADALDQSATKANPGR-----------RSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVL-------------------KASTGRVVYTNNVSWVTSAPA----------------------------------GEGGSA-------GLVSMLDKNTLVSMLEAWGAVDEERRELGGAEAGXXXXXXXXXXXXALAAVDPGAGGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA 1052          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L867_9PHAE6.530e-11841.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J4N2_9PHAE1.750e-11340.76Integrase catalytic domain-containing protein n=18... [more]
A0A6H5KS85_9PHAE1.130e-10939.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG40_9PHAE1.710e-10938.11Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KBD4_9PHAE5.080e-10843.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JL48_9PHAE1.000e-10539.94Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JZF4_9PHAE7.480e-10037.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6V8_9PHAE8.900e-10039.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L749_9PHAE2.320e-9842.10Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JQ01_9PHAE1.860e-9735.98Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 278..488
e-value: 2.1E-20
score: 74.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 283..393
e-value: 1.1E-17
score: 64.3
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 281..463
score: 17.651
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 218..525
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 218..525
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 284..469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12054contigL-elsbetiae_contig12054:1844..4252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12054.1730.1mRNA_L-elsbetiae_contig12054.1730.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12054 1212..5841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12054.1730.1 ID=prot_L-elsbetiae_contig12054.1730.1|Name=mRNA_L-elsbetiae_contig12054.1730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=803bp
MDFFPPAPPGGDPSDPPPPSSGGGGGGGAPWIASQPTGTAGVVTLNASTL
GVSPTGSYGFVPSSAVGFDLPPIGPAGVVPCGVGFSPIGVDDVVPENDPF
SEVLLAEFPPALSGVVSANGECSFPPADTGVVIKNSGLILQGPRTLAGLE
LDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQG
PACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKK
QDVELTGNLETCVPCVAIKARRASVPRTGGRASEPGHTYHVDLCGGFVPA
LCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSC
LRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGA
TTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANP
GNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYN
HGRSTVAVLKASSGRVCFTKDIVWVARSAASASAGKGGGAPLPTTLTLPI
LPPPLPPSPQPLAPLSGTGEPPATGSLLPPPPPFSIEPPAPETAEPAPSP
PPPPQPDLPRPGAAAAPARGLPPLSQRVIRELGWGQAGVMPEVRLRSRTR
SGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQ
GEMQSNAPPIRTPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDR
PELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAV
AN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf