prot_L-elsbetiae_contig12013.1713.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12013.1713.1
Unique Nameprot_L-elsbetiae_contig12013.1713.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
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BLAST of mRNA_L-elsbetiae_contig12013.1713.1 vs. uniprot
Match: A0A6H5LAB3_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB3_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 8.020e-19
Identity = 47/72 (65.28%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:    1 EDGLGGFFLSDGGQETDFAAAFRIRVGEGNRDWPLTQDCHFSAGLTVFRVHLRKPSTPSPEEGDEEDDPSAA 72
            E G GGFF SDGGQ TDFAAAFRIRVG+GNR+W     CHFSAGLTVFR HL KP++     G+  DD S A
Sbjct:  286 ERGRGGFFFSDGGQGTDFAAAFRIRVGKGNREW--RTGCHFSAGLTVFRAHLTKPTS-----GESNDDDSNA 350
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BLAST of mRNA_L-elsbetiae_contig12013.1713.1 vs. uniprot
Match: D7FNP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP5_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 6.990e-7
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:   10 SDGGQETDFAAAFRIRVGEGNRDWPLTQ 37
            SDGGQ TDFAAAFRIRVGEGNR+W LTQ
Sbjct:  172 SDGGQGTDFAAAFRIRVGEGNREWRLTQ 199
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12013.1713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAB3_9PHAE8.020e-1965.28FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNP5_ECTSI6.990e-789.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12013contigL-elsbetiae_contig12013:1051..2674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12013.1713.1mRNA_L-elsbetiae_contig12013.1713.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12013 1050..2674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12013.1713.1 ID=prot_L-elsbetiae_contig12013.1713.1|Name=mRNA_L-elsbetiae_contig12013.1713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
EDGLGGFFLSDGGQETDFAAAFRIRVGEGNRDWPLTQDCHFSAGLTVFRV
HLRKPSTPSPEEGDEEDDPSAAVVDTAEGESRSGAGAGAGAGADGREA
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