prot_L-elsbetiae_contig12005.1707.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12005.1707.1
Unique Nameprot_L-elsbetiae_contig12005.1707.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
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BLAST of mRNA_L-elsbetiae_contig12005.1707.1 vs. uniprot
Match: A0A6H5KW30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW30_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.750e-67
Identity = 147/264 (55.68%), Postives = 163/264 (61.74%), Query Frame = 0 
Query:    1 MRRILGFCVAALPIAASFTV-----RSGVHPRVPCQQQ---GKDSIMFSGGTRHRTRR-------YAGEG--GPANLDSSDDTPEADAEIYASLRKRLEELEK----SAPIAAEEVEAPPRAPV-----RERE-FTIPRESAEDKKRSRALLTIQSVGVISAALSFGTLALYWLAGAYFVHLGPREYPGSASSRGGASPTPSIERTAVAGDEDRGATSA---QRRALGGSSTREAFRFDGFPDAAG----------KDVVAPDF 224
            MR  +G C AALP   SFT+     RS +     CQ++   G +    S GTR  +         YAGEG  G AN+D SDDT E DAE+YASLRKRLEELE     SAP A EE    P         RERE FTIP+E+ EDK+RS ALLTIQSVGVISAALSFGTLALYWLAGA FVHLGPREYPGS SSRG A   P  ER  V  DE+ GA      Q RA+GGSSTREAF+F+GFPD  G          K VV PDF
Sbjct:    1 MRYAIGLCAAALPFVRSFTMGPAAYRSVIPAAASCQKECSGGSNQQQASYGTRRISXXXXXXXXXYAGEGXXGSANMDPSDDTSEGDAEMYASLRKRLEELENRVETSAPAAQEEQGQEPAVTANNRGAREREWFTIPKEAPEDKRRSLALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSVSSRGSAGTAPGFERIVVGEDENGGAQQVPQTQGRAMGGSSTREAFQFEGFPDVGGGGSXXXXXXXKGVVPPDF 264
[Close]
BLAST of mRNA_L-elsbetiae_contig12005.1707.1 vs. uniprot
Match: D7FUI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI3_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 2.390e-62
Identity = 125/186 (67.20%), Postives = 136/186 (73.12%), Query Frame = 0 
Query:   60 LDSSDDTPEADAEIYASLRKRLEELEK----SAPIAAEEVEAPPRAP----VRERE-FTIPRESAEDKKRSRALLTIQSVGVISAALSFGTLALYWLAGAYFVHLGPREYPGSASSRGGASPTPSIERTAVAGDEDRGATSA---QRRALGGSSTREAFRFDGFPDAAG---------KDVVAPDF 224
            +D SDDT E DAE+YASLRKRLEELEK    SAP   E+V+ P  A      RERE FTIP+ES EDK+RSRALLTIQSVGVISAALSFGTLALYWLAGA FVHLGPREYPGS SSRGGAS  P IER A   D + GA  A   +RRA+GGSSTREAF+F+GFPD  G         K VV PDF
Sbjct:    1 MDPSDDTSEGDAEMYASLRKRLEELEKQVGTSAPAPQEQVQEPAVAANNKGAREREWFTIPKESPEDKRRSRALLTIQSVGVISAALSFGTLALYWLAGAAFVHLGPREYPGSMSSRGGASTAPGIERIAAGEDGNGGAQQAPQTKRRAMGGSSTREAFQFEGFPDVGGSGGGSGGVGKGVVPPDF 186
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12005.1707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW30_9PHAE1.750e-6755.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUI3_ECTSI2.390e-6267.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..129
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.595
NoneNo IPR availableTMHMMTMhelixcoord: 130..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12005contigL-elsbetiae_contig12005:1141..3791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12005.1707.1mRNA_L-elsbetiae_contig12005.1707.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12005 1074..3946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12005.1707.1 ID=prot_L-elsbetiae_contig12005.1707.1|Name=mRNA_L-elsbetiae_contig12005.1707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MRRILGFCVAALPIAASFTVRSGVHPRVPCQQQGKDSIMFSGGTRHRTRR
YAGEGGPANLDSSDDTPEADAEIYASLRKRLEELEKSAPIAAEEVEAPPR
APVREREFTIPRESAEDKKRSRALLTIQSVGVISAALSFGTLALYWLAGA
YFVHLGPREYPGSASSRGGASPTPSIERTAVAGDEDRGATSAQRRALGGS
STREAFRFDGFPDAAGKDVVAPDF*
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